Basic Information

Insect: Ophion costatus
Gene Symbol: -
Assembly: GCA_951751655.1
Location: OX632360.1:854968-862766[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.6 9.9e+02 1.1 0.0 3 23 273 293 271 293 0.92

2 14 0.0023 0.27 12.3 3.9 3 23 302 323 301 323 0.96

3 14 1.4e-06 0.00016 22.5 1.9 1 23 477 499 477 499 0.99

4 14 0.0037 0.42 11.7 0.2 1 20 503 522 503 523 0.95

5 14 0.00046 0.053 14.5 2.8 1 23 536 559 536 559 0.94

6 14 0.021 2.4 9.3 1.4 1 20 563 582 563 584 0.94

7 14 4.2e-05 0.0048 17.8 8.1 3 23 590 610 588 610 0.95

8 14 0.00043 0.05 14.6 1.2 3 23 635 655 633 655 0.97

9 14 0.17 19 6.5 2.9 1 23 660 682 660 682 0.97

10 14 0.0054 0.62 11.2 0.1 2 23 688 709 687 709 0.94

11 14 0.01 1.2 10.3 8.7 1 23 714 737 714 737 0.96

12 14 0.00079 0.09 13.8 3.1 1 23 743 765 743 765 0.97

13 14 2.9e-05 0.0033 18.3 5.7 1 23 771 794 771 794 0.96

14 14 0.047 5.4 8.2 4.7 1 23 799 822 799 822 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.6	9.9e+02	1.1	0.0	3	23	273	293	271	293	0.92
2	14	0.0023	0.27	12.3	3.9	3	23	302	323	301	323	0.96
3	14	1.4e-06	0.00016	22.5	1.9	1	23	477	499	477	499	0.99
4	14	0.0037	0.42	11.7	0.2	1	20	503	522	503	523	0.95
5	14	0.00046	0.053	14.5	2.8	1	23	536	559	536	559	0.94
6	14	0.021	2.4	9.3	1.4	1	20	563	582	563	584	0.94
7	14	4.2e-05	0.0048	17.8	8.1	3	23	590	610	588	610	0.95
8	14	0.00043	0.05	14.6	1.2	3	23	635	655	633	655	0.97
9	14	0.17	19	6.5	2.9	1	23	660	682	660	682	0.97
10	14	0.0054	0.62	11.2	0.1	2	23	688	709	687	709	0.94
11	14	0.01	1.2	10.3	8.7	1	23	714	737	714	737	0.96
12	14	0.00079	0.09	13.8	3.1	1	23	743	765	743	765	0.97
13	14	2.9e-05	0.0033	18.3	5.7	1	23	771	794	771	794	0.96
14	14	0.047	5.4	8.2	4.7	1	23	799	822	799	822	0.95

Sequence Information

Coding Sequence: ATGCCGCCTTTAAAGGAACTCGTGATGCCTCCTGCTAATCTCGCAGTGCCGATGGATGATAAGATGATAAATGAGAATACAGCCGACAATTACTTGGCAGCCGACCATCGACAGATCGAAGAAACATGCACGAGCATCGCAGTCTGCGGCATTTGTGGCCAGCCGCACGGAACGACGAGCTGCCGATTTTTCGGGCGCTTAGAATACGTCCGGGACGAGCCGCCGCTTTCCAGGGCCAGGCAGACCTTACCCAAATGTCTGAAGATCACGACAATGGCGGACGGCAGTACGACGGTAACGGCGAGGCGCGATTTCCCGCAGGGCACCACCTTCGGCCCTCTCCAGGCAAAACGCGTCCGGACGATGAACCCGATGAACGATTTCCCCATAAAAGTATTCGGCGATCGAGCCACCGATACCCGCTATCTCGATCGCACGGACGAGGACGCCTCCAACTGGATGTGCCTCGTGGCCCCGGCCTCCAACGCCTCGGAGCAGAATCTCCTCTGCTATCAGACCGCGTCGCCCACAGGCGGGGACATTTTTTACACGGCCATGCGCTCGATCGCCCAGAGCGAGGAACTTCGCGTCTGGTATGCTCCGCGTTATGCGCAACGAATGAGAATGCCACTGTACAACGCGGAATTCGCGGTCGTTCCTGAACCGAAGACGACGAAGAGCGCCGAGCCGCCGTCGCTCGTAGAGGAAGAAAACAATCAACCGGAAGTATCATTGCCTGGTGGCAACATCGAAGAAATCGCGCAGAGATTGCCCGCCCGACAGTTAGGCGCTCGAGGCGACAAAGCCAGCTGGGACTGCGCGATCTGCTCTTTAGTGATGACGTCCGTTATCGAGTACGCGAAACACCTTATGCAACATTACAAACCCCTGTCCGGCGTGTTCTGCGACGTTTGCGACAAAAAGTTTCACCGACTCTCGGTCTTGCAGAAACACAAGCGCCTGAAGCATCCCGAGGGGAGGCCGAACGTCGAGGCGGTTGGCATTCCTACTTCCGGCAGTCAGCAACAGCAGAACGCTCAGACGATCCTCATGAACATGAGCGACGAGGGGGGCCAAACGTCCGAAGCGATGAAGGACATATTTGAGAAATTCAAGGCCGGAAGAGCCGTGACGGAATGCAGTCTGCCTTCGTCGATCGACAAGAGCGCTGCGAGCGAGTTGCTCGACGAGTCTCGCGCGATGAACGTGAGCGACCTCTTGCAGAGCAGCGGCGCTCTCATCGAGAACGCGGCCCTCAAGTCGATCTTGGAGAACCAATGCTCGAGCATCGGGGACTCGATTATCCTCTCGGACAACGCGAGCAACTGCGCCGACTCGGTAAAGTTCAGCGTCGACGAGGAACTGGCCTCGGATCTCTTGGAGATCGCGTCGGAAGTCACCGGGACGAATCTTGCCCGGATCGACCGTTTCCGTTGCGACATATGCGACAAGAAATTCGAGAAAGCCGACTATCTCTATCGACACTTGAGAAAACACACCGGGGAGTTTATCTGTCCCGATTGTCTCGGCGTATTCgcgagaaaagaaaatttgttgTCGCACTTGTGTCCCGCCTCATCGAGGACCAGAAACGAGCACCGGAAACACGAGTGTCCCTACTGTCAGAAAGCCTTCCTGACGAAGAAATACCTCAAGCGTCACGTGACCATCAGACACACCGAGTCATTCGTCTGCAAGTGGTGCAGAACTTCGTTCGCTTCCGGTCACGAGCTCGAGGCGCACAAGTGTCAAGCACCCAGACATCTCTGCCCCCATTGCGGCAAACGTTTCGTTCATCGCGAACATCTTACGCGACACGCGAAATCACACGTCAATCCGAGACCCCCCCTGACGACGAGAAACAGAACGAGAAAGAGAGTATCGATGGAGAGGCCGGTTATCTGCGAGAAATGCGGCGATCTCTTCAAGAATCCTCACAGCTTGAAGCAACACTTGCGATCACACGGCGAGAGGAAATTCGAGTGCGACATTTGTCACAGTAAATTTCACCGGATAGGCGTGCTCCAACAGCACAAATCGGTGCACCAGAGCGTTCAGATACCCTGCCAAATTTGCGGCAAGCAACTCAAGAGCAAAAAGGCCCTCGGCGTCCACGTTTTGCTCCACGGGAATAGAAGGTTCCATTGCGACAAATGTGACAAAaGTTTCTTTCAACGATGCAACTACCTCAAGCATTACAAGCAACTGCACAGTGACAAGATCCTGCACAAGTGTCCTCATTGCCCGACACAATTCGCAAGCGAATTCAGCTACAACCGGCACGTCGAGAGTCACGCGAAGCCGACCGAGCATCCGTGCAAATCCTGTCACAAAGTATTCCGTCGGGAGTACCAGTTGAAGCGCCACGTCCAGACGAATCACAGCGGTATCGTGTTTCGTTGTCCGTACTGCAAAATGACGGCCCGCTATCGTCACAGCATGAGACGTCACTTCGAGCGGCAGCACAAGGGCCTCAGCGACGAGTGGAACAGGCCGGGCTTCGTCAATGATCTCATCGAGAAAACTTCAACTCCGAATGACCAGGATCAAAAAAACTCCATCGTCCAAATGCCTTACGTAGAGGCAAACACCGCGGAGATTGGATGCGCCGATAATCCTCAGAGTTTCGTTATCTCGATGAGGGATTTGGACGAAACCCGAATGAACGAACAGCCGACAATTCGAGAAAACGTATCCCATGATATAGAGACCTCATTAAACGGACAGGAAATCTTGCTCCGAGTAGCGGATATCGGTCAGTCTGAGGCGATCGTGAGGGACGAATTAGAAGCTAACGAGGTCCCCCAGTTGAGTATCAGCGAAACCGAGCCCACTCTCGCGGAGGCCGTGTTGGGCAACGCGTACATATTCGGCGAGGACGGTGGCGACATTATGTTTTACGTTCTCGAGAACACGCCGGCGATCGCGGAATATTGA
Protein Sequence: MPPLKELVMPPANLAVPMDDKMINENTADNYLAADHRQIEETCTSIAVCGICGQPHGTTSCRFFGRLEYVRDEPPLSRARQTLPKCLKITTMADGSTTVTARRDFPQGTTFGPLQAKRVRTMNPMNDFPIKVFGDRATDTRYLDRTDEDASNWMCLVAPASNASEQNLLCYQTASPTGGDIFYTAMRSIAQSEELRVWYAPRYAQRMRMPLYNAEFAVVPEPKTTKSAEPPSLVEEENNQPEVSLPGGNIEEIAQRLPARQLGARGDKASWDCAICSLVMTSVIEYAKHLMQHYKPLSGVFCDVCDKKFHRLSVLQKHKRLKHPEGRPNVEAVGIPTSGSQQQQNAQTILMNMSDEGGQTSEAMKDIFEKFKAGRAVTECSLPSSIDKSAASELLDESRAMNVSDLLQSSGALIENAALKSILENQCSSIGDSIILSDNASNCADSVKFSVDEELASDLLEIASEVTGTNLARIDRFRCDICDKKFEKADYLYRHLRKHTGEFICPDCLGVFARKENLLSHLCPASSRTRNEHRKHECPYCQKAFLTKKYLKRHVTIRHTESFVCKWCRTSFASGHELEAHKCQAPRHLCPHCGKRFVHREHLTRHAKSHVNPRPPLTTRNRTRKRVSMERPVICEKCGDLFKNPHSLKQHLRSHGERKFECDICHSKFHRIGVLQQHKSVHQSVQIPCQICGKQLKSKKALGVHVLLHGNRRFHCDKCDKSFFQRCNYLKHYKQLHSDKILHKCPHCPTQFASEFSYNRHVESHAKPTEHPCKSCHKVFRREYQLKRHVQTNHSGIVFRCPYCKMTARYRHSMRRHFERQHKGLSDEWNRPGFVNDLIEKTSTPNDQDQKNSIVQMPYVEANTAEIGCADNPQSFVISMRDLDETRMNEQPTIRENVSHDIETSLNGQEILLRVADIGQSEAIVRDELEANEVPQLSISETEPTLAEAVLGNAYIFGEDGGDIMFYVLENTPAIAEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01103782;
90% Identity: iTF_01102285;
80% Identity: -