Ocos010034.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- dmd-4
- Assembly
- GCA_951751655.1
- Location
- OX632359.1:24778607-24790954[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-26 3.6e-22 78.5 11.5 1 47 21 67 21 67 0.99 2 2 0.77 4.1e+03 -1.7 0.8 3 8 362 367 361 369 0.76
Sequence Information
- Coding Sequence
- ATGTTGCGCGCAAAGTCGAAGAAATCGACGGAGGACGAGCACGGGAGCGAGTGCAAGCAGAGAAGACCAAAGTGCGCACGTTGCAGAAATCACGGACTAATCTCGTGGCTCAGAGGGCACAAACGCGAGTGTCGATACAGAGAATGCATGTGCCCAAAGTGTTCTCTCATTGCTGAAAGACAGCGAGTTATGGCAGCCCAGGTGGCGCTGAAGAGACAGCAAGCTGCCGAGGATGCGATCGCTCTCAGTATGGCCAAAGTGGCAACCGGTCAAAAATTGGATCGTCTTCCACCCGGTAAGATATTCGGCATGGCTGTGACCGAACCGAATTCCACCACTCTCTCAGCTTCATCCGCGATTCCCAGAGAATCGTCAGATTCGCCGGAGTACGAAGGAGCTCCTCGGGATCATGATGAAACGAAGGCAACGGAAGATCGCGGAAAAGTCGACGTGGCCTCGCCGTTCAGCGTAACGACGAAGCGGAAGGACACAGTGCCCGAGGAATCCGGAAACCAGGAAGGTATCACGGTTTCGCCGAGTTCTGTGGAGACGCTGTCTAGATTGTTCCCCAGTACGAAGCTGTCAGTGCTCCAGCTGGTTCTGCAACGTTGCGGACAAGATTTGTTGAAGGCAATCGAGTATTTCGCGAGTGAAAATGGGACGCTCGAAGGGTCGTCTTCGTCGCGTGGATCCTCGGCGTTTCGTCCGCCGGCTCCGAATTCATTGACGGAAGGAAGAACCAGCAGCGAATATTCCTCCAGCGTTTTTCCGCTCCCCCCGGTGTACTCGAACCTCTCGAGGAATTTGTACGGCGACGGGTATTGTCTTTTGAATATTGTGCCCGATCAATTGTCGCGAGGTCTCGTTTCCGGTGAACTGTCCACGGGAAATTGTCACGCTCACGCCTACTCGTCGGTCTCGAAAGCTTCGAGCTCCCACCACGAGCAGGAGAACAGCGTTGCGTTCAGCGTACGCTACAACAATTACTTTAACTCGAGCGTGCAGCAACAATTGCGCGAACACACCGCTCGCAGCGGTCTGCTTCATCTTCCGCCCGTCATACCCGGAATTCCCTGCGTCCAGCCAAACTGTACGCAATGCTATAAGTTCATCTAA
- Protein Sequence
- MLRAKSKKSTEDEHGSECKQRRPKCARCRNHGLISWLRGHKRECRYRECMCPKCSLIAERQRVMAAQVALKRQQAAEDAIALSMAKVATGQKLDRLPPGKIFGMAVTEPNSTTLSASSAIPRESSDSPEYEGAPRDHDETKATEDRGKVDVASPFSVTTKRKDTVPEESGNQEGITVSPSSVETLSRLFPSTKLSVLQLVLQRCGQDLLKAIEYFASENGTLEGSSSSRGSSAFRPPAPNSLTEGRTSSEYSSSVFPLPPVYSNLSRNLYGDGYCLLNIVPDQLSRGLVSGELSTGNCHAHAYSSVSKASSSHHEQENSVAFSVRYNNYFNSSVQQQLREHTARSGLLHLPPVIPGIPCVQPNCTQCYKFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01102820;
- 90% Identity
- iTF_01103577;
- 80% Identity
- -