Ocos014672.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- dl
- Assembly
- GCA_951751655.1
- Location
- OX632361.1:41411079-41412740[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-72 4.6e-68 229.0 0.0 1 169 14 183 14 183 0.99 2 2 0.12 8.2e+02 0.4 0.1 117 157 416 457 406 464 0.77
Sequence Information
- Coding Sequence
- ATGGAATCGGGGACGTATCACAGCGAGGGTTATCCTTACGTGGAGATAGTGGAGCAACCGGCGAGCAAAGCTCTCCGGTTCCGTTACGAGTGTGAGGGTCGTTCGGCCGGAAGTATTCCGGGTGCCAACAGCACCCCCGAGTACAAGACGTATCCGACGATAAGGGTGTGCAACTACCAAGGTCGAGGTATCGTAATAGTGTCTTGCGTGACGAAGGACGGGCCGTATAGGGCTCATCCTCACAGTCTGGTCGGCAAGGGGACTTGCAAGGCAGGTGTATGCCGTATGGACATAACACCTGGCAATCCTACCGTGAGCTTCGTCAACCTTGGCATCCAGTGCGTTAAGAAGAAGGACATTGCCGAGGCGTTGTCGCTGCGCGAGAAGATCCGGGTGGATCCTTACAGGCTCGGTTTCGATCACAAGGGACAAGCGTCGAGTGTGGATCTGAACGTGGTTAGAATGTGTTTCCAAGTGTTTATCGAGGGCAAGGAGGGTAAGGTGAACATTCCCCTGAAGCCGGTAGTGTCCGAGCCGATCTACGACAAGAAGGCGATGTCCGATCTGCTGATCTGCAGGTTGAGTCATTACAGCGCCTCGGCTGCCGGTGGCACTGAGATGATAGTGCTCTGCGAGAAAGTCGCCAAGGAAAACATCCAGGTGCGTTTCTTTGAGAAACGGGACGGGCGGGAGGTCTGGGAGGGTTACGGTGACTTCAAGTCGATCCACGTGCACAAACAAGTGGCCATTACATTTCGTACACCTAGCTACAACGATCACGATATCGAGGAGCCGGTGCAGGTCTATCTGCAGCTGAAAAGACCATCGGACGGTGCCACCAGCGAGCCCTTGCCCTTCAAGCTTTTGCCATTGGGCACCGACGATCACGACTGCCTCAGAAGGAAACGCCGCAGATTCTCGGAGTGTCCTCGGGCCGAGGTGTTGCGAAGGATACAATCGGAGGCCGAAAAGCAAGGGATCTTGCTGACCGAGCCGATCTTCGAGTGCGCCAATGATCCGCTGAAGTTGGATAACTGCGTTCaaccgtctcccgttgagagcACGGCACAAGCAGCTTTCAACGAGGGTGCCTACTCGTTCGTCTGCATGCCCGAGACTCCGGTGCAATCGCCCGCCAGCCCCGCCGTTGACGTGGCTACCTATGCCAATCAGGACTCCCCGGCCAGCCTGCCGTCACCCGCCATGGGCTACGCGGCGTACAACGGCTTCCCAGCGGATCACCAGGCCAACGAGGAGTTCGAGACGGCCCGCAACAATCAGGCATATCCGCAGCAGCAAATGGACCGCTCGAATTACGCCAACTGCTATCATCATCAACTACCGAACCATCATCAACAGCAGAGCCCCGTTCTCCAGAAGCTCAGCGTGCCCCAAAGCTTCCAGCAAACCGCTTATCAACAGGATCATCACCAAGAGGCTTTCGGTGAGCCAGACCTGATCGACATCCACGGCCAACAACCAACCAGCTTCGACGCGAGTCTCAATCAATTGGACTCGGCCGAACTGGCGGCCTTCAATGTGTCTCCATCCGAGACTCTCTCGACTGGATTCTCGTTGATCGATCATCCGATTAAAATGGAGAACAACACGAGGACGGGAACAATCCCTGTGAGCGTTGGGGCTTCCTGGTGCGCCATGTAG
- Protein Sequence
- MESGTYHSEGYPYVEIVEQPASKALRFRYECEGRSAGSIPGANSTPEYKTYPTIRVCNYQGRGIVIVSCVTKDGPYRAHPHSLVGKGTCKAGVCRMDITPGNPTVSFVNLGIQCVKKKDIAEALSLREKIRVDPYRLGFDHKGQASSVDLNVVRMCFQVFIEGKEGKVNIPLKPVVSEPIYDKKAMSDLLICRLSHYSASAAGGTEMIVLCEKVAKENIQVRFFEKRDGREVWEGYGDFKSIHVHKQVAITFRTPSYNDHDIEEPVQVYLQLKRPSDGATSEPLPFKLLPLGTDDHDCLRRKRRRFSECPRAEVLRRIQSEAEKQGILLTEPIFECANDPLKLDNCVQPSPVESTAQAAFNEGAYSFVCMPETPVQSPASPAVDVATYANQDSPASLPSPAMGYAAYNGFPADHQANEEFETARNNQAYPQQQMDRSNYANCYHHQLPNHHQQQSPVLQKLSVPQSFQQTAYQQDHHQEAFGEPDLIDIHGQQPTSFDASLNQLDSAELAAFNVSPSETLSTGFSLIDHPIKMENNTRTGTIPVSVGASWCAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01101836;
- 90% Identity
- iTF_01101098;
- 80% Identity
- -