Obrm013858.1
Basic Information
- Insect
- Operophtera brumata
- Gene Symbol
- nfxl1
- Assembly
- GCA_001266575.1
- Location
- JTDY01006795.1:5553-9607[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 1.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.0076 1.3e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 18 1.6e-07 0.0027 17.6 15.9 3 19 186 202 185 202 0.95 4 18 3.1e-08 0.00052 19.9 13.3 3 19 239 255 237 255 0.91 5 18 3.8e-10 6.4e-06 26.0 11.3 1 19 290 308 290 308 0.99 6 18 3.1e-06 0.052 13.5 18.3 3 19 345 361 337 361 0.86 7 18 1 1.7e+04 -5.4 2.2 5 10 384 389 384 389 0.88 8 18 3.1e-06 0.053 13.5 18.3 1 18 395 412 395 413 0.97 9 18 6.8e-10 1.2e-05 25.2 14.1 1 19 422 440 422 440 0.99 10 18 0.00011 1.8 8.6 6.4 9 19 488 498 486 498 0.89 11 18 0.0011 18 5.4 7.5 1 12 508 518 508 518 0.96 12 18 0.18 3.1e+03 -1.8 3.3 14 18 547 551 547 552 0.85 13 18 0.13 2.2e+03 -1.3 0.1 8 12 568 572 567 573 0.80 14 18 1.8e-05 0.3 11.1 5.3 1 11 588 598 588 599 0.97 15 18 0.18 3e+03 -1.7 1.2 14 18 612 616 611 617 0.82 16 18 4.7e-05 0.8 9.7 13.8 1 18 628 645 628 646 0.89 17 18 1 1.7e+04 -6.6 3.4 9 13 652 656 652 656 0.71 18 18 2.8e-06 0.047 13.7 11.7 1 18 687 705 687 706 0.86
Sequence Information
- Coding Sequence
- ATGGCGCGCCGCTACAGAGATGCAGCCGCGAGACTGCAGCAAAACGTTCAGAAACACCTCAAGGATATGAAGGAACTATCTTCTTCCGAAGATGAGGAGCCCTACGAGGCCAGCGTCATTGAGGGGATGTTCCAGAGCTATTGGCGAGGAGGTGGGGATACCCACATGCTGAATAGAACCAAGAACCTTCTAGAAGAAGCGATCAGCGGCCGCTCTGTGGCTTGTCTCATCTGTATCAGCTCGATCAAACGTAACCATGCCGTCTGGACATGCGATCACTGTTACTCATACTTCCATCTATCCTGCATTCAGAAATGGGGAAATGACAGCATAAGTTTGCGCAGCATCGAACCTGATGCGCCGATAAGTGTTTACAAGCCGCAGAAAATTGAATGGTGCTGCCCGAAGTGCCGAAATTCGTACAGCAAGGAAGAAATACCGAGGAAGTATAGATGTTTCTGTAGCAAAACTGACAATCCACCTGTTCACCCGTGGTTAATCCCTCATACTTGTGGGGAAGTGTGTGAAAAGAGGCTATCGAAAGGGGACAACTGTAAACATAAATGCCTACTCTTATGCCATCCTGGCCCATGCCCTCCTTGTCCACAAATGGTCAATGGAATATGCTTCTGTGAAAACGAACGGAAGAAAGTAAGGTGCAGTGCCGCAAAGTGGTCATGTGGCCAGCAGTGTAAGAAAACTCTTCTGTGCCAGACTCATAAGTGTGAACTAATATGTCATGAAGGGGAATGCCCACCATGTAGTTACACCAGTGTCCAACCATGTCAATGTGGAGCTGAGAAGACTAAAAGACCCTGTGATGACCCATTCTGGCACTGTAAAAAGGCTTGCAACAAACCGTTCTCATGCGGTTATCATAAATGTGAGAAAGTATGCCACGCAGGTAGCTGTGATGAATGCCCTAACTCCGGCACGAGGTCCTGTCCTTGCGGTGCCAATCAGCGCTACGTTCAATGTCCTGACGTCATGGAAACATGCCTTGGAACCTGTGGGAAGATGCATGAAGATTGTGAACACAGTTGCCCTGAGAAATGTCATAAAGGATCCTGCCCACCATGCCAAGTCCTTATACAAAAGAAATGCCAATGCTCTACTCATACCAGATCCCTTCCATGCAGTAAAGAGTTCAAATGTGAAACTAAATGCAGAGGTACCAGACCTTGTGGAAAACATGGCTGTGCTAGAAAATGCTGCAATGGCAACTGCCCTCCCTGTGAAAAAGCCTGTGATAAGCCGCTACAATGTGGCCGCCATAAGTGCACCACTATCTGCCACCGTGGACCATGCTACCCCTGCCCATTGGAGTCTAAAATAACCTGCAAATGTAAAGAAACCTATTTGACTGTCCCGTGCGGTAGAGAGAAGTTTACTAAACCACCTAAATGTCACCTCCCATGCAAGGTAAAGTACAAATGTGGTCATGCTGAGGAAAACAAGCATTCTTGCCATTTCGGAGACTGTCCACCATGCAAAGCCATCTGTTACAAAACTTACCCAAAATGTGGTCATGACTGCAAAGCAACATGCCATGAGTATAAGGCTGTGGTTTTCAAACAGATTGAGAAACCAGCTACACCTTGGGAAGTTCAACCACCGAAAACTAAGATTATGACTTTAGAATGCCCTCCATGTAACACCCCCATCTCGGTCATCTGTTTTGGGGAGCATGAGACAGACAACCAGCCCTGTCACACTGCGACCCGCAGACCATGTGGCAGAGAATGTGGTAAACCTTTGCCTTGTGGAAACCACAACTGCACTCTAATCTGTCATTTGTATAGCCCAAATCCTGACTACCAAAATGTGCCTCACAATTGCAAGCCTTGTGAAAGAGAGTGTGTGAAACCCCGTCCAGAAAAATGCTCCCATAAGTGTTCTGTCAGAGCTTGCCATCCCGGACCATGTCGTCCTTGTGAGATTTTGGAGCGCATCCCATGCCACTGCGGTATCACCGAGCTATATTTAAGATGTAGAGAGTACTGCTTAGCTACAGAAGAAGTGCTATCATGCAAACAGCAATGCCCAAAGAACTTAAAATGTGGTCACCGTTGCAAAAATACATGTCACTCTGGTACCTGCAGCAACCAAGTTTGTACTAAGAAAACTAAGATACATTGCCCCTGTGGCAACTTAAAGAAAGATGCTCCTTGTAATTTAGTCAAAAGTGGTGACGCTAATGTTGTGTGTGATGAGACGTGCAAAGTCAAGAAAGCAGCTGCTAAGCTAGAGAGTGAGAAAGAGCAACAGAGATTGAAGGAGTTAGAAGAGGAGAGGAATAACAAAGAGCTGGCTGAATACGAGTGGAAACTGAGcggaaaaaagaagaaatacaAGGAAAAGAAGGTTGTGATCTACAAGGATGAAAGGATCTGGGTACATCGACACTGGATGCCGATCTtTTACGTGCTACCGTCAGATGTTTTAAGGCAGATTGGAACAAATAAAGCGTACTCATTTAAAAGTGAGCCACAACCATCAACCACAACTTCAAGCCTCGTAAGTTTGAGCGATTCAATACCCTTCCAAATCATCAATGATACAGAAGTCGATACTGACGAAGATTAA
- Protein Sequence
- MARRYRDAAARLQQNVQKHLKDMKELSSSEDEEPYEASVIEGMFQSYWRGGGDTHMLNRTKNLLEEAISGRSVACLICISSIKRNHAVWTCDHCYSYFHLSCIQKWGNDSISLRSIEPDAPISVYKPQKIEWCCPKCRNSYSKEEIPRKYRCFCSKTDNPPVHPWLIPHTCGEVCEKRLSKGDNCKHKCLLLCHPGPCPPCPQMVNGICFCENERKKVRCSAAKWSCGQQCKKTLLCQTHKCELICHEGECPPCSYTSVQPCQCGAEKTKRPCDDPFWHCKKACNKPFSCGYHKCEKVCHAGSCDECPNSGTRSCPCGANQRYVQCPDVMETCLGTCGKMHEDCEHSCPEKCHKGSCPPCQVLIQKKCQCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHRGPCYPCPLESKITCKCKETYLTVPCGREKFTKPPKCHLPCKVKYKCGHAEENKHSCHFGDCPPCKAICYKTYPKCGHDCKATCHEYKAVVFKQIEKPATPWEVQPPKTKIMTLECPPCNTPISVICFGEHETDNQPCHTATRRPCGRECGKPLPCGNHNCTLICHLYSPNPDYQNVPHNCKPCERECVKPRPEKCSHKCSVRACHPGPCRPCEILERIPCHCGITELYLRCREYCLATEEVLSCKQQCPKNLKCGHRCKNTCHSGTCSNQVCTKKTKIHCPCGNLKKDAPCNLVKSGDANVVCDETCKVKKAAAKLESEKEQQRLKELEEERNNKELAEYEWKLSGKKKKYKEKKVVIYKDERIWVHRHWMPIFYVLPSDVLRQIGTNKAYSFKSEPQPSTTTSSLVSLSDSIPFQIINDTEVDTDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- iTF_00663729;
- 80% Identity
- -