Echr023558.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epirrita christyi
Gene Symbol
nfxl1
Assembly
GCA_951392215.1
Location
OX595858.1:12077259-12079730[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 3.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.014 2.2e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 20 3.1e-07 0.0047 17.7 15.9 3 19 186 202 185 202 0.95
4 20 4.2e-08 0.00065 20.4 13.4 3 19 239 255 237 255 0.91
5 20 0.093 1.4e+03 0.1 4.7 6 12 280 286 279 286 0.91
6 20 8e-09 0.00012 22.7 11.1 1 19 290 308 290 308 0.99
7 20 5.3e-06 0.081 13.7 18.1 3 19 345 361 337 361 0.86
8 20 2 3.1e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 20 5.9e-06 0.091 13.6 18.3 1 18 395 412 395 413 0.97
10 20 2.3e-08 0.00036 21.2 16.9 1 19 422 440 422 440 0.99
11 20 0.0002 3.1 8.6 6.4 9 19 488 498 486 498 0.89
12 20 0.002 31 5.5 7.5 1 12 508 518 508 518 0.96
13 20 0.24 3.6e+03 -1.1 2.5 14 18 547 551 547 552 0.92
14 20 0.22 3.3e+03 -1.0 0.3 8 12 568 572 567 579 0.79
15 20 1.9e-05 0.29 11.9 5.1 1 11 588 598 588 599 0.97
16 20 0.32 4.9e+03 -1.6 1.1 14 18 612 616 611 617 0.82
17 20 8.5e-05 1.3 9.9 11.6 1 18 628 645 628 646 0.88
18 20 2 3.1e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 20 5.3e-06 0.08 13.7 11.7 1 18 687 705 687 706 0.86
20 20 1.8 2.8e+04 -4.0 1.2 6 10 736 740 735 740 0.86

Sequence Information

Coding Sequence
ATGGCGCGCCGCTACAGAGACGCAGCCGCGAAACTGCAGCAGAACGTGCAGAAACACCTCAAGGATATGAAGGAACTATCTTCTTCAGAAGATGAAGAGCCTTACGAGGCCAGCGTCATCGAGGGGATGTTCCAGAGCTATTGGCGAGGGGGTGGGGATACCCACATGCTGAATCGAACCAAGAATCTTCTGGAAGAAGCGATCAGCGGCCGCTCTGTGGCTTGTCTCATCTGTATCAGCTCTATTAAACGGAACCATGCCGTCTGGACGTGCGACCATTGCTACTCGTACTTCCATCTATCGTGCATTCAGAAATGGGGAAATGATAGCATAAGTTTGCGTAGCATCCAACCTGATGCGCCAATAAGTGTCTACAAGCCACCGAAAATTGAATGGTGCTGCCCGAAGTGCCGAAATTCGTACAGTAAGGAAGAAATACCGAGGAAATATAGATGTTTTTGTAGCAAAACTGACAATCCACCTGTTCACCCGTGGTTAATCCCTCATACTTGTGGAGAAGTGTGTGAAAAGCGACTGTCAACAGGGGACAACTGTAAACACAAATGCCTACTTTTATGCCACCCTGGGCCATGCCCTCCTTGTCCACAAATGGTCAACGGAATATGCTATTGTGAAAAGGAACGGAAGAAAGTAAGGTGTAGTGCTGCAAAATGGTCATGTGGCCAGCAGTGTAAAAAAACTCTTCTTTGTCAAACACATAAATGTGAACTCCTATGCCATGAAGGGGAATGCCCACCATGTAGCTACACTAGTGTCCAACCATGTCAATGTGGAGCTGAGAAGACTAAAAGACCATGTGATGACCCATTCTGGCACTGCAAAAAGGTGTGCCACAAACCATTTTCATGCGGTTATCATAAATGCGAGATAGTATGCCACTCAGGCAGCTGTGAAGAATGCCCTAACTCTGGCATGAGGTCCTGTCCTTGCGGAGCCAATCAGCGCTACGTCCAATGTCCTGACACCATGGAAACATGCCTTGGAACGTGTGGGAAGATGCATGATAATTGTGAACACAGTTGCCCTGAGAAATGTCATAAAGGATCCTGCCCTCCTTGCCAAGTTCTGATACAAAAGAAATGCCAATGCTCAACTCATACCAGATCGCTGCCATGTAGTAAAGAGTTCAAATGTGAAACTAAATGCAGAGGTACCAGACCTTGTGGAAAACATGGCTGTGCCAGAAAATGCTGCAACGGCAACTGCCCTCCGTGTGAAAAGGCCTGTGATAAACCGCTTCAATGTGGCCGCCATAAGTGCACCACTATCTGCCATCATGGACCATGCTACCCCTGCCCGTTGGAGTCTAAAGTACCTTGCAAATGTAAAGAGACTTATTTGACCGTCCCGTGTGGTAGAGAGAGATTCACCAAACCACCGAAATGTCACCTCCCTTGCAAGGCGAAGTACAAATGTGGTCATGCTGAAGAAAATAAGCATTCTTGTCATTTTGGAGACTGTCCACCGTGCAAAGCCATCTGCTACAAAACTTACCCAAAATGTGGTCACGACTGCAAAGCAACATGTCATGAGTATAAAGCTGTATTGTTTAAACAGATTGAGAAACCTGCTACACCTTGGGAAGTACAACCACCAAAGACTAAGATCATGACTTTAGATTGCCCTCCGTGTATTATGCCCGTCTCTGTCATCTGTTTTGGGGAGCATGAGACAGACAACCAGCCCTGTCACACTGCAGCCCGCAGACCATGTGGCAGAGAATGTGGTAAATCTTTGGCTTGTGGAAACCATAACTGCACTCTACTCTGTCATTTGTATAGCCCTGATCCTGACTACCAAAACCTGCCTCATAATTGCAAGCCCTGTAACAGAGAGTGTATTAACCCCCGTCCAGAAAAATGCTCACATAAGTGTTCTATCCGTGCTTGCCATCCTGGAGCGTGTCGTCCTTGTGAGACGTTGGAACGTATCCCGTGCCACTGTGGTATTACTGAGCTGTATCTAAGATGTAGAGAGTACAGCTCAGCTACAGAAGAAATGCTATCATGCAAACAGCAATGCCCAAAGAACTTAGAATGTGGTCACCGTTGCAAAAATACATGTCACTCTGGTACCTGCAGCAACCAAGTTTGTACCAAGAAAACTAAGATACATTGCCCCTGTGGCAATTTAAAGAAAGATGCTCTTTGTAATTTAGTCAAAAGTGGTGTGGCTAAAATTGAGTGTGATGAGACGTGCAAAGTCAAGAAAGCAGCTGCTAAGCTAGAGAGTGAGAAAGAACAACTGAGATTGAAGCAGTTAGAAGAGGAGAGGAATAATAAAGAGCTGGCTGAATACGAGTGGAAACTCAGCGGGAAAAAGAAGAAATACAAGGAAAAGAAGGTTGTGATCTACAAGGATGAAAGGAATTGGGTACATCGACACTGGATGCCGATCCTGTCTGTTTTTGCCTTAATACTGGCAGTGTCGtactatattttgtatttgtag
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEEPYEASVIEGMFQSYWRGGGDTHMLNRTKNLLEEAISGRSVACLICISSIKRNHAVWTCDHCYSYFHLSCIQKWGNDSISLRSIQPDAPISVYKPPKIEWCCPKCRNSYSKEEIPRKYRCFCSKTDNPPVHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQMVNGICYCEKERKKVRCSAAKWSCGQQCKKTLLCQTHKCELLCHEGECPPCSYTSVQPCQCGAEKTKRPCDDPFWHCKKVCHKPFSCGYHKCEIVCHSGSCEECPNSGMRSCPCGANQRYVQCPDTMETCLGTCGKMHDNCEHSCPEKCHKGSCPPCQVLIQKKCQCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHHGPCYPCPLESKVPCKCKETYLTVPCGRERFTKPPKCHLPCKAKYKCGHAEENKHSCHFGDCPPCKAICYKTYPKCGHDCKATCHEYKAVLFKQIEKPATPWEVQPPKTKIMTLDCPPCIMPVSVICFGEHETDNQPCHTAARRPCGRECGKSLACGNHNCTLLCHLYSPDPDYQNLPHNCKPCNRECINPRPEKCSHKCSIRACHPGACRPCETLERIPCHCGITELYLRCREYSSATEEMLSCKQQCPKNLECGHRCKNTCHSGTCSNQVCTKKTKIHCPCGNLKKDALCNLVKSGVAKIECDETCKVKKAAAKLESEKEQLRLKQLEEERNNKELAEYEWKLSGKKKKYKEKKVVIYKDERNWVHRHWMPILSVFALILAVSYYILYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
iTF_01100276;
80% Identity
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