Obrm011954.1
Basic Information
- Insect
- Operophtera brumata
- Gene Symbol
- Kdm5
- Assembly
- GCA_001266575.1
- Location
- JTDY01004926.1:19981-22428[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-21 2e-17 63.2 0.0 3 89 94 176 92 176 0.93 2 2 1.3 5.5e+03 -2.2 0.1 60 83 781 800 779 803 0.72
Sequence Information
- Coding Sequence
- ATGGATACCAAAAATATTCAGAAAAATGCCATGCAGAAAAGTGCAGAGTTTACTTTCACTCCACCTCCTGAAGCGCCCGTGTTTGAGCCCACACTTGAAGAGTTCTCGGATCCTCTGGGTTACATCGCTAAGATCCGcccagtggcagaaaaaacaggAATCTGCAAAATTAAACCACCATCACGATGGCAGCCACCATTTTCATTAGATGtggataaattaaaatttgttccCAGAATACAGAAAGTTAATGAGCTGGAAGCCATAACGCGACTGAAGCTTTTGTTTCTagagaaaattttaaaattctggGATCTCCAGGGTTCTCCCTTAAAAATTCCCATGATAGAAAATAAAACTCTTGATTTATACTGTCTAAAGTTTTGGGTTGATGAAGAAGGCGGATTTGGAAGCTGTGACACACCAAAAAAATGGCGTAAAATTTCGATTGCAATGGGGTACAGTCAAAGTGCACATACCATGAACTTCCTGAGGAGTAACTATGAAAAAATCCTGCTACCATATGAAATATTTGAGAAAAGTAAAGCAGACATATTGAAAACTGTAAAAAAGACTGAATtaaaagaagaaaagcaggAAGTAAACGATGATAGTGATTCTGATGTGCAAATCATACAGGAAGTATCAATAGAATCTATTACCCAGATGAAAACAGAAATCAAAGTTGAAAAACAACATACCAGCATTAAAAAAACGAAAACTGGATCAGATATAAAGCCATCTATGGATACTACCAAAACTAATGTTGTCAATGACGAGATCAAGCGTAACAGAGAGTTAAGAAGATTAACTTGCTATGGACCCGGGCCTAAAATGCCAGGCCTTAATGATGAAGAGTTTGATATAACTAAGTCAAGAAAAAGGCCTCGCTATGACATGGATCCTTTGGCCATTTATGTGTGTGCCATATGTCAGAAAGATGATAGGGATGACTTACTTTTGATTTGCAATGGTTGTTCAGACACATACCATACATATTGTCTGAAGCCTCCACTTCAGTCCGTGCCAGATGGTGACTGGAGATGCCCATGTTGTATTGTTCAAGAGGTACATAAGCCCGCTGAAGCTTTTGGCTTTGCTCAAGCAGAAAGGGAGTATACACTTCAGCAATTTGGAGAAATGGCAGATAAATTCAAATCTGACTACTTCAGCATGTCTGGTCATCTGGTACCTACTTCTGTAGCTGAAAAAGAATTTTGGAGAATAATATCATCAGTAGAAGAAGATGTCACAGTGGAATATGGAGCTGATCTACATTCTATGGACCATGGTTCTGGTTTTCCAACAAAATCTTCACTAAACCTCTATCCaggggatcaggaatatgttgATTCTGGATGGAACCTAAACAACTTGCCAGTGTTAGACGGTTCCGTACTGAGGTTTATTAATGCAGATATATCTGGCATGACTGTGCCCTGGATGTACGTGGGAATGTGTTTCTCAGCGTTCTGTTGGCATAACGAGGACCACTGGAGCTACTCCATCAATTATTtgcactggggagaagccaagACCTGGTATGGAGTTCCAGGTGGTAGAGCAGAGTTGTTGGAAAATGCAATGAAAGCTGCTGCACCAGACCTGTTCAAGTCTCAGCCTGACTTGCTGCATCAACTAGTCACCATAATGAATCCAAACATATTGATGGCAGCAGGTGTTCCAATATACAGAACTGACCAACAAGCTGGGGAGTTTGTTGTCACATTTCCCAGAGCATATCATGCTGGGTTTAACCAAGGTTATAACTTTGCTGAAGCTGTTAACTTTGCTCCACCTGATTGGCTAAAAGTCGGCAGAGAATGCATAATCCACTACAAAAACCTAAAACGATTCTGTGTCTTTTCACATGATGAACTGATATGCAAAATGGCATTGGAAGGTGACCGCTTAGACTTAGAAACAGCTTTGGAAACACAAAAAGAACTTGTACGTGCCACAGAGGATGAAGGCTCTTTAAGAGCTAAAATTTCAAAGCAGGGACTGAAGAGTGCTAGGAGAACTGCTTTTGAGTTGCTGGGTGATGATGAGCGCTTGTGTGAAGTATGCAAAACTACTTGCTTCCTGTCTTCAGTGTCTTGCAGTGCTTGTAAACAAATGGCTTGTTTGCAACATACCAATGATCTATGCCTGTGCCCGTTAGACAGAAAGACCCTCTTTTATCGCTACGATATGGATGAACTGCACATTATGCTGCAAACTATTGACTTTAGGGTGAATAGTTTTGACAAGTGGAtgactgaaacaaaaaacattttgctCCCCACGTCTCCTGATATTGGACGGTTACAGAAGTTGAAAGTTCTGATTGATGATGCTGAAGAATTGAAAATACCAAAGTGCACGTTGCTTGCACAGTTGAAGAGCTATTATAATAAGGCAACCCAGAATGATGAACCTATTGTTATAGAGTTAGATGATGATTAG
- Protein Sequence
- MDTKNIQKNAMQKSAEFTFTPPPEAPVFEPTLEEFSDPLGYIAKIRPVAEKTGICKIKPPSRWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWDLQGSPLKIPMIENKTLDLYCLKFWVDEEGGFGSCDTPKKWRKISIAMGYSQSAHTMNFLRSNYEKILLPYEIFEKSKADILKTVKKTELKEEKQEVNDDSDSDVQIIQEVSIESITQMKTEIKVEKQHTSIKKTKTGSDIKPSMDTTKTNVVNDEIKRNRELRRLTCYGPGPKMPGLNDEEFDITKSRKRPRYDMDPLAIYVCAICQKDDRDDLLLICNGCSDTYHTYCLKPPLQSVPDGDWRCPCCIVQEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFSMSGHLVPTSVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGGRAELLENAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQQAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKVGRECIIHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVRATEDEGSLRAKISKQGLKSARRTAFELLGDDERLCEVCKTTCFLSSVSCSACKQMACLQHTNDLCLCPLDRKTLFYRYDMDELHIMLQTIDFRVNSFDKWMTETKNILLPTSPDIGRLQKLKVLIDDAEELKIPKCTLLAQLKSYYNKATQNDEPIVIELDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01487498;
- 90% Identity
- iTF_00662868;
- 80% Identity
- -