Echr007393.1
Basic Information
- Insect
- Epirrita christyi
- Gene Symbol
- Kdm5
- Assembly
- GCA_951392215.1
- Location
- OX595840.1:4645403-4647847[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-22 1.2e-18 68.1 0.1 3 89 94 176 92 176 0.93 2 2 2.3 7e+03 -1.8 0.0 59 83 779 799 777 802 0.74
Sequence Information
- Coding Sequence
- ATGgatacaaaaaatattcagaaaAATGCCATGCAAAAAACTGCAGAGTTTACTTTTACTCCACCTCCTGAAGCGCCTGTGTTTGAGCCCACACTTGAAGAGTTCTCGGATCCTCTGGGTTACATCGCTAAGATCCGCCCAGTCGCAGAAAAAACAGGAATATGTAAAATTAAACCACCATCACGCTGGCAGCCACCATTTTCATTAGATGtggataaattaaaatttgttcCCAGAATACAGAAAGTCAATGAGTTGGAAGCCATAACGCGATTGAAACTTTTGTTTCTAgagaaaattttgaaattctGGGATCTTCAGGGCTCCCCCTTGAAAATTCCCATGATAGAAAATAAAACTCTTGATTTATACTGTCTTAAGTTTTGGGTTGATGAAGAAGGCGGATTTGAAAACTGTAACACACCAAAAAAATGGCGTAAAATTTCGATTGCAATGGGGTACAGTCAAAGTGCAAATACCATGAACTTCCTAAGGAGTAACTATGAAAAAATCCTGCTACCATACGAAATATTCGAGAAAAGTAAAGCTGATATATTGAAAACTGTAAAAAAGACTGAATTAAAAGAAGGCCTAAAGCAGGAAGCAAAACATGATAGTGGTTCTGATGTGCAAATGATCAAAGAAGTATCAATAGAATCTATTACTCAGATGAAAAAAGAAATGAAAGTTGAAAAGACCagcattaaaaaaactaaaacaggATCAGATATAAAGCTCGCTCCGGATACCACCAAAACAAATGTTGTCAATGAAGAGATAAAATATAACAGGGAGTTAAGAAGATTAACTTGCTATGGACCCGGGCCTAAAATGCCAGGCCTTAATGATGAAGAGTTTGATATAACTAAATCAAGAAAAAGACCTCGCTATGATATGGACCCTTTGGCTATTTATGTGTGTGCCATATGCCAAAAAGATGATAGAGATGACTTACTTTTGATTTGCAATGGTTGTTCAGACACTTACCATACTTTTTGTCTGAAGCCTCCACTTAACTCTGTGCCAGATGGTGACTGGAGATGCCCGTGTTGTATAGTTCAAGAGGTTCATAAGCCCCCTGAAGCTTATGGATTTGCTCAAGCAGAAAGAGAGTACACACTGCAGCAATTTGGAGAAATGGCAGATAAATTCAAATCTGATTACTTCAGCATGTCTGGTCACCTAGTACCAACTTCTGTTGCTGAAAAAGAATTTTGGAGAATAATATCATCAGTAGAAGAAGATGTCACAGTGGAATATGGAGCTGATCTACATTCTATGGACCATGGTTCTGGTTTTCCAACAAAATCTTCACTAAACCTCTATCCTGGTGATCAGGAATACGTTGATTCTGGGTGGAATCTAAACAACTTGCCAGTCTTAGACGGTTCTGTACTGAGGTTTATTAATGCTGATATATCTGGCATGACTGTGCCTTGGATGTATGTGGGAATGTGCTTCTCAGCATTCTGTTGGCACAATGAGGACCACTGGAGTTACTCCATCAATTATTTGCATTGGGGAGAAGCCAAGACCTGGTATGGAGTTCCTGGTGGCAGAGCAGAGGTGTTGGAAAATGCAATGAAAGCTGCTGCACCAGATTTATTCAAGTCTCAGCCTGACTTGCTACATCAACTAGTCACCATAATGAATCCTAACATATTGATGGCTGCAGGTGTTCCAATATATAGAACTGACCAACAAGCTGGAGAATTTGTTGTCACATTTCCCAGGGCATATCATGCTGGGTTTAACCAAGGTTATAACTTTGCTGAAGCTGTAAATTTTGCTCCACCGGATTGGCTTAAAGTTGGCAGAGAATGCATAATCCACtacaaaaatctaaaacgaTTCTGTGTTTTCTCACATGACGAACTGATATGCAAAATGGCATTAGAAGGTGACCGCTTAGACTTGGAAACAGCTTTGGAAACACAAAAAGAACTTGTACGCGCCACAGAAGATGAAGGCTCTTTAAGAGCTAAAATTTCTAAACAGGGACTGAAGAGTGCCAGAAGAACTGCTTTTGAGTTGCTGGGTGATGATGAGCGCTTGTGTGAAGTATGCAAAACTACATGTTTTCTGTCTTCAGTCTCATGTAGTGCTTGTAAACAAATGGCTTGTTTGCAACATACAAATGATCTATGCCTTTGTCCATTAGACAGAAAGACAATCTTTTACCGCTACGATATGGATGAACTGCACATAATGCTGCAGACTATTGACTTCAGGGTTAATAGTTTTGACAAGTGGAtgacagaaacaaaaaatattttgcttcCCACTTCTCCCGATATTGGAAGATTACAAAAGTTAAAAGTTCTGATTGATGATGCTGAAGAATTGAAAATACCAAAGTGTACGTTGCTGTCACAGTTAAAGAGCTATTATAATAAGGCCACTCAAAATGTTGAACTTATTGTAATAGAGTTAGATGATGATTAG
- Protein Sequence
- MDTKNIQKNAMQKTAEFTFTPPPEAPVFEPTLEEFSDPLGYIAKIRPVAEKTGICKIKPPSRWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWDLQGSPLKIPMIENKTLDLYCLKFWVDEEGGFENCNTPKKWRKISIAMGYSQSANTMNFLRSNYEKILLPYEIFEKSKADILKTVKKTELKEGLKQEAKHDSGSDVQMIKEVSIESITQMKKEMKVEKTSIKKTKTGSDIKLAPDTTKTNVVNEEIKYNRELRRLTCYGPGPKMPGLNDEEFDITKSRKRPRYDMDPLAIYVCAICQKDDRDDLLLICNGCSDTYHTFCLKPPLNSVPDGDWRCPCCIVQEVHKPPEAYGFAQAEREYTLQQFGEMADKFKSDYFSMSGHLVPTSVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGGRAEVLENAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQQAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKVGRECIIHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVRATEDEGSLRAKISKQGLKSARRTAFELLGDDERLCEVCKTTCFLSSVSCSACKQMACLQHTNDLCLCPLDRKTIFYRYDMDELHIMLQTIDFRVNSFDKWMTETKNILLPTSPDIGRLQKLKVLIDDAEELKIPKCTLLSQLKSYYNKATQNVELIVIELDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01487498;
- 90% Identity
- iTF_01099662;
- 80% Identity
- -