Obrm004870.1
Basic Information
- Insect
- Operophtera brumata
- Gene Symbol
- Su(H)
- Assembly
- GCA_001266575.1
- Location
- JTDY01001165.1:84162-93730[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 9.8e+03 -3.5 0.0 24 44 134 154 126 158 0.43 2 3 4.1e-13 3.4e-09 36.7 0.2 1 34 172 205 172 206 0.95 3 3 1.1e-28 9.5e-25 87.0 0.0 72 123 206 257 203 257 0.98
Sequence Information
- Coding Sequence
- ATGGAGCGCTACCTGCGTGACCGCGCCGACATGATTGTGGTGATCCTGCACGCCAAGGTCGCGCAAAAGTCGTATGGTAACGAGAAGCGCTTCTTCTGCCCACCGCCCTGCATCTACCTTTTCGGGGACGGCTGGCGGCTGCGGCGCGAGCGCATGCTGCGCGAGGGCGAGACAGAGCAGGCCGCGCAGCTGTGTGCCTTCATCGGCATCGGCAACTCTGACCAGGACATGCAGCAGCTGGACCTCAACAACGGCAAGCAGTACTGCGCCGCCAAGACTCTGTACATATCTGATTCTGACAAGAGGAAACACTTCATGCTCTCTGTGAAGATGTTCTATGGAAACGGGCATGATATTGGTATTTTTAATAGTAAAAGAATAAAAGTTATATCTAAGCCATCAAAGAAGAAACAGTCTCTGAAAAATGCAGATTTATGTATAGCTAGTGGTACAAAAGTAGCCCtattcaaccgattgagatctCAAACAGTCTCTACGCGGTATCTTCATGTGGAGAATGGTAATTTCCATGCATCGTCAACACAATGGGGAGCATTTACAATACACTTATTGGATGACAATGAGAGTGAGTCTGAGGAGTTTGCAGTGAGAGATGACGACCCAGTATCACAACTCCACAAATGCGCGTTCTTTATGAAAGACACTGAGCGGATGTACCTGTGCCTCTCTCAAGAACGCATCATACAGTTCCAAGCGACGCCCTGCCCGAAGGAGCCTAATAAAGAGATGATCAATGATGGTGCCTGCTGGACGATCATCTCGACGGATAAGGCGGAGTACCAaagtttacatccgactgatgatgatgatgatgatgatgtagatgatgatgaaattagt
- Protein Sequence
- MERYLRDRADMIVVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRRERMLREGETEQAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGIFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVRDDDPVSQLHKCAFFMKDTERMYLCLSQERIIQFQATPCPKEPNKEMINDGACWTIISTDKAEYQSLHPTDDDDDDDVDDDEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -