Obir004294.1
Basic Information
- Insect
- Ooceraea biroi
- Gene Symbol
- grn
- Assembly
- GCA_003672135.1
- Location
- NC:9008208-9087246[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2 5.2e+03 -3.5 0.1 7 18 7 18 6 20 0.78 2 3 2.5e-19 4.1e-16 57.7 4.7 1 35 490 523 490 524 0.98 3 3 8.9e-18 1.5e-14 52.7 5.6 1 35 544 577 544 578 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGTGAGTCGAGCACCGCTAGGTGGTACGAGCCGCCTAGGTCGTCGCTGGAGCCGCCTTCGGGGGGCGCCGGGGTGGCCGGGGTGGTTGGCAACCCCAGCGACTACAGGGGTTACTACCCCCACGCCGGACCAACGGCGCACCACGCCACATCCGCGGTCGCACACTACGCCCACACAAGGATGTCCAGCAGCGGCGTATCGAGCGGCCCGGTGAGCCAGGTCTGCCGGCCGCATTTTCACAGCTCGGTTCTCCATCCGTGGTTATCCGGCAGCAGCGCGGACACCTCGAAGCCTTGGGGATTTCCCGCAACGACGGCGACCACGGGCGGTGCCGTGAGCGACGAGAAGCCACAAAGTCCTTTGGGATCCTCGTTGCCGCCCACCACCGGAAGTCTGTCGAGtcacggtggcggcggcggccatCATCTCTTCTCCTTTCCGCCAACGCCACCAAAGGATGCTACACCCGACAGCATAACCGCCAGCACGACGTCCAGTACGAACAACAATAACTCGACGAGCGCCAACAACAACAATAGTGGCAATCCTCTCTCTGGACTGGGAGGTGGTAGCACCAGCGAGTACCAAGCGGCGGCGGTCGCGCACGCGGCGGTGATGGGCGCATTTATGCACCACCAGGACGCACTGGGTACTTCCGGCGCGAGCTCGTGCGACATCAAACCGATGCTCGGCCATCATCACGGGGCGCCCTCGCCGCCGCACCAGCAGCACAATGGCTCCAACAACGGCAGCAACGGTCCCGCTGGCACAAACGGCTCTTCCGCTGGCCAGGTGAAGCAGCGAGAAGGTAATAACCAATCCGGCAATGTAACGGGCAGCCAACAGGCGAGCGCcacgcaacagcagcagcaacagcaacaggaCGCGTATCAAAGCAACAGCGGCGTGCCGgctggcggcggtggcggtggcggtggcgcaggcggtggcggtggtggcggcagcggtggtggcggcggcggcggtggcggtggcggcgcggCCTCGCCCTGCAGGGACAATTATGCGGCCGCGGCCGCAgccgccgccgcggcggcgAGCAACAGCCACCATGCTTCTTCCGGTTCGCAGTACGACCCGGCCGCGAGCGCGTACAACATGTACCAGCACCTGCAGTATCCCACCACCGCCCATcaccaccatcatcatcatcacggCGGCACCACGGTGTCGTCGTCTAACGCCGCGTCCTCCCACAATCCGCACAACGGCAGTGCGGCCGCGGTCGCCGGTATTTTCGGTCATCACGCCGCCAGTGCCGGTAACGCGACCGGCGGTCTGACCGGCGGCCTCCCCGGCGGCCTCCCCGGCGGCGCCGAGTCGAAGCTGCTAGTCGGTCACGCGCACGGAAACACGCCGGGCTCACCCTccgcgcagcagcagcaacagcaaaaGCCGAGGAACAAGTCGAGGACGTCCGCCGAGGGTCGCGAGTGCGTAAATTGCGGCGCCACATCGACACCTCTCTGGAGACGAGATGGCACCGGTCACTACCTCTGCAACGCCTGCGGGCTTTATTACAAGATGAACGGTCAGAACCGACCTCTCATCAAGCCGAAACGACGCCTGAGCGCGGCGAGACGAGCGGGCACCAGCTGCGCCAACTGCAAGACGGCCACCACGACCCTCTGGCGAAGGAACCAGGCTGGCGAGCCGGTCTGCAACGCTTGCGGACTCTACTACAAATTGCACAATGTGAACCGACCGCTGACGATGAAGAAGGAGGGTATTCAGACGAGAAACAGGAAGCTCTCGTCAAAGagtaagaagaagaagactgGCGGTTGCCTAGGCCTCGGTGTCATGGGTGACATGATCAAGGCCAGTGGACATCTCGATCTCGATAACAAGCCCTTCCACTCTGGATTTGGGTCGCCAATGGGTGCGTCGCAGCATCATCACACGATGCATCCGGCGATGCAGCATTACATGTATCACACGGGTGTCGGCGTGGCCGGAGGTCTTCATCAGGGATTTGCGCCACCGGCGCCGCCCCCCATCCACCCGCACTCGCATTCGCATTCCCATTCTCATCACATGACGAGTCTTCAGGGTCTACAGCTGGCTGCCACGACGAACGCAATGACCGGCTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDMSSESSTARWYEPPRSSLEPPSGGAGVAGVVGNPSDYRGYYPHAGPTAHHATSAVAHYAHTRMSSSGVSSGPVSQVCRPHFHSSVLHPWLSGSSADTSKPWGFPATTATTGGAVSDEKPQSPLGSSLPPTTGSLSSHGGGGGHHLFSFPPTPPKDATPDSITASTTSSTNNNNSTSANNNNSGNPLSGLGGGSTSEYQAAAVAHAAVMGAFMHHQDALGTSGASSCDIKPMLGHHHGAPSPPHQQHNGSNNGSNGPAGTNGSSAGQVKQREGNNQSGNVTGSQQASATQQQQQQQQDAYQSNSGVPAGGGGGGGGAGGGGGGGSGGGGGGGGGGGAASPCRDNYAAAAAAAAAAASNSHHASSGSQYDPAASAYNMYQHLQYPTTAHHHHHHHHGGTTVSSSNAASSHNPHNGSAAAVAGIFGHHAASAGNATGGLTGGLPGGLPGGAESKLLVGHAHGNTPGSPSAQQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKTGGCLGLGVMGDMIKASGHLDLDNKPFHSGFGSPMGASQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00230987;
- 90% Identity
- iTF_00417964;
- 80% Identity
- -