Obir011234.1
Basic Information
- Insect
- Ooceraea biroi
- Gene Symbol
- dmd-4
- Assembly
- GCA_003672135.1
- Location
- NC:16787143-16792085[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-26 3.2e-22 77.5 10.7 1 47 23 69 23 69 0.99 2 2 0.16 6.1e+02 -0.2 0.6 2 9 359 366 359 368 0.82
Sequence Information
- Coding Sequence
- ATGCTACGCGGCAAGAGCAAGAATAAGCTGAGAAACAACGGGGACGACGACGGGAACGGGAAGCAGAGAAGACCAAAGTGTGCTCGTTGCAGAAATCATGGCCTGATCTCGTGGCTGCGAGGCCACAAGCGGGAGTGTCGTTATCGAGAATGCCTATGCCCAAAGTGTTCGCTGATCGCCGAGCGGCAGCGAGTGATGGCCGCGCAGGTCGCCCTGAAAAGACAGCAAGCAGCTGAGGATGCTATCGCTCTTAAAATGGCAAAGGTGGCAACTGGTCAGAAGCTTGACCGACTTCCACCAGGCAAAATTTTTGGAATGTCCGTGACAGAACCGAAATCGATGATAAATCGAGACGAAGATGCGATTTCCATCTCAAAGAAGATGGATGGAATTTCCGAAGACTTGAAAGATTTTTCGGCGAACGATGCTTGTTCACAAAAATCTTTCGATGGTTTAAAACTCTGCTCGAGatccaaaagtgttttcaacgTCGACAACCCGGAGGGCTTTAAAGAAGTCGCTCCGGTGTCCCAAACGTCCGTGGAGACTCTAACTCGCCTTTTTCCGAACACCAAACTGTCAGTTCTGCAATTGGTATTACAACGTTGCGGTCAAGATCTGCTAAAGGCGATTGAATACTTTGCCAACGATAATCTAAGGATTGTCGAGCCAAGTGTATCGCCAAGCATCAATCACGCATCAGCTTTCCGACCGCCCGCGCCGCAGACGACGATCGTCGACAACGTTACTACTGCAGCAACTGGagaacagcagcagcaaccgATTTCCAGCACGATGTTAACGCCGATCTACACCAGCCTATCTAAGAATGTTTATGGGGATGCGGGTTATTATTTGCTGAACATTTTGCCAACCGAACCGTTCGCTAGGAGGACCGATCAGACCGATACCGTCGCACTGACCAATTTCTGTTACAACAGCTATTTTCCGGCCGGTATCCAACAGCTAAGAGACACGCGCATGTGCAGCCAAATGACGGAGGATCGGTTGTCGACCGCAAGATCAACGGGCATTTTGCATCATTTGTCGCCCAGCATGTTGTCGGCCTGCATACAGCCGAATTGCGCGCAATGCAACTACAAGTTCTcatga
- Protein Sequence
- MLRGKSKNKLRNNGDDDGNGKQRRPKCARCRNHGLISWLRGHKRECRYRECLCPKCSLIAERQRVMAAQVALKRQQAAEDAIALKMAKVATGQKLDRLPPGKIFGMSVTEPKSMINRDEDAISISKKMDGISEDLKDFSANDACSQKSFDGLKLCSRSKSVFNVDNPEGFKEVAPVSQTSVETLTRLFPNTKLSVLQLVLQRCGQDLLKAIEYFANDNLRIVEPSVSPSINHASAFRPPAPQTTIVDNVTTAATGEQQQQPISSTMLTPIYTSLSKNVYGDAGYYLLNILPTEPFARRTDQTDTVALTNFCYNSYFPAGIQQLRDTRMCSQMTEDRLSTARSTGILHHLSPSMLSACIQPNCAQCNYKFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -