Basic Information

Insect: Onthophagus taurus
Gene Symbol: L
Assembly: GCA_000648695.2
Location: NW:3446658-3454528[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.9e-06 0.00075 19.5 0.3 1 23 103 125 103 125 0.98

2 20 0.086 6.5 7.1 6.0 1 23 131 153 131 153 0.97

3 20 1.6e-06 0.00012 22.0 1.2 1 23 159 181 159 181 0.99

4 20 0.00057 0.044 13.9 1.3 1 23 187 209 187 209 0.97

5 20 7.3 5.6e+02 1.0 0.1 6 16 254 264 252 264 0.84

6 20 0.0043 0.32 11.2 0.1 3 23 284 305 282 305 0.95

7 20 0.001 0.078 13.1 0.2 1 23 317 340 317 340 0.93

8 20 3.6 2.7e+02 2.0 1.4 2 23 394 415 393 415 0.92

9 20 0.071 5.4 7.3 0.0 2 23 426 447 426 447 0.94

10 20 0.0051 0.38 10.9 7.2 3 23 457 478 456 478 0.90

11 20 0.02 1.6 9.0 0.3 1 23 483 506 483 506 0.93

12 20 2 1.5e+02 2.8 0.3 1 11 513 523 513 527 0.89

13 20 0.9 69 3.8 5.2 1 19 566 584 566 589 0.70

14 20 0.12 9.2 6.6 0.1 2 23 624 646 623 646 0.89

15 20 9.9e-05 0.0075 16.3 4.4 2 23 660 681 659 681 0.97

16 20 5.8e-05 0.0044 17.0 0.4 1 23 690 712 690 712 0.98

17 20 2.2 1.7e+02 2.6 3.0 2 23 720 741 720 741 0.96

18 20 0.00035 0.026 14.6 0.3 2 23 855 876 854 876 0.95

19 20 0.0032 0.24 11.6 0.0 1 23 884 906 884 906 0.95

20 20 0.0014 0.11 12.7 1.0 1 23 913 935 913 935 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.9e-06	0.00075	19.5	0.3	1	23	103	125	103	125	0.98
2	20	0.086	6.5	7.1	6.0	1	23	131	153	131	153	0.97
3	20	1.6e-06	0.00012	22.0	1.2	1	23	159	181	159	181	0.99
4	20	0.00057	0.044	13.9	1.3	1	23	187	209	187	209	0.97
5	20	7.3	5.6e+02	1.0	0.1	6	16	254	264	252	264	0.84
6	20	0.0043	0.32	11.2	0.1	3	23	284	305	282	305	0.95
7	20	0.001	0.078	13.1	0.2	1	23	317	340	317	340	0.93
8	20	3.6	2.7e+02	2.0	1.4	2	23	394	415	393	415	0.92
9	20	0.071	5.4	7.3	0.0	2	23	426	447	426	447	0.94
10	20	0.0051	0.38	10.9	7.2	3	23	457	478	456	478	0.90
11	20	0.02	1.6	9.0	0.3	1	23	483	506	483	506	0.93
12	20	2	1.5e+02	2.8	0.3	1	11	513	523	513	527	0.89
13	20	0.9	69	3.8	5.2	1	19	566	584	566	589	0.70
14	20	0.12	9.2	6.6	0.1	2	23	624	646	623	646	0.89
15	20	9.9e-05	0.0075	16.3	4.4	2	23	660	681	659	681	0.97
16	20	5.8e-05	0.0044	17.0	0.4	1	23	690	712	690	712	0.98
17	20	2.2	1.7e+02	2.6	3.0	2	23	720	741	720	741	0.96
18	20	0.00035	0.026	14.6	0.3	2	23	855	876	854	876	0.95
19	20	0.0032	0.24	11.6	0.0	1	23	884	906	884	906	0.95
20	20	0.0014	0.11	12.7	1.0	1	23	913	935	913	935	0.97

Sequence Information

Coding Sequence: ATGTCCAGAAGGAAACAACCGAATCCTGCCAAATTAGgCGATTGtgaattgaaaatgaaacCGGATGAATTAGGAAAAAAGATGGAGGAGTCAAGAagtgaaaaaaatgaagaggaagatgaaGAGAGTGAAGGTTCGGAGTTGGGGTGTCTAGATGATGAAGACGACGGTAGTGGCAGTGTGAACGGTCGTGCCAGTTCCCCTTCGAGCAGCAATTCCTCACCGGTTAGTTGTCGCAGTTTCGGATTAAGCGACGCCACCGACGTCGAAGAAACTTACACTGTCGGCGCCACCGCTACCACCCCTTATGAATGCAACGTTTGCAAAAGAGCTTTTTCGAGATCTTCAGTATTGGGCAAACATTTAcaagtCCACACGGACCAGTTGCAATTTAGCTGTCCGTATTGTAGAAGgctttttaaacataaaagatCAAGAGATCGACACACTAAGCTTCATACGGGCGACAAGAAATATAAATGTGCGTTATGTGATTCGGCGTTTGCGAGAAGCGACCATCTAAAAATCCACATGAAGACGCACGACAACAAAAAGCCACACCAGTGTGATTTATGCAATAGAGGTTACAACACGGCGGCGGCGTTGGCTTCTCATCAACAACATCACACGAAAAAAGAACTTAGATGCGGAAGTAGTTCGAGTAGGACGACGACTACTCCAAGCACTCCCAGTCCAGGTCAAACGAAGTGCTCACAAATCCAGGTGAGTACAAAACGATCTTCCACGGATTTTGATCGATGTGGAAGATCTTTTCAGAACAAGCGTAAACTTCCAACGCCAAACAACGATACTACCGTGCCGAAACAAGAAGTGGATCTTAAAATAGCTTGTATGTACTGCGGTAAAGATTTCGCAACAATGAACTTGATGTATCAACACATCAACATCGACCACTcctctttattttttcaacaCAGCTCGCTCAGTTACGTCTGTGATTTATGTTCCATGAAATTTGATACCTCCCAAACGCTAAGGGAACACTTAGAAGGTGTCCATTGGAAATTAAACGCCGTTGGAACGTCATCCCAAGCGAAAGCGACCGATTTAAGTAGAAAACGTAAATGTGATGAACCTGAAGATAACCGAAAAACTGAGGAGATTAAAAATTCGCCCTCAACTGTTAGTAGCCCGTATGACACCAACGATAAGCCATGTATTTGTTCGTATTGTTACGCACAAATgcctaattttaaaagttttttggtcCATATGGAAACTCACGTGTCACTGAATGCTTCGAGTCTCATTGGATATTGCCCGGTTTGTGGAGAACCGGGTCGAGACCCAATTGAGTTTAGTTCTCACATTTTCGGACATGTCGTTAGCGATGCCACAGGAAGGTGTTGCCACCAATGCAAAAAATCTTTCGATCAACTCGATCAGTTACAAAAACATCACTTTGAGGCGCACTCCCAAAGTGTGTATAAATGCACGTTGTGTGGGGAATACTTTGAAAATGAGATTGCTATTCaggttcaCTTTAACAATAAACATTGCAACGAATGTAAGCATTATAGATGTAATTTATGTCCTCAGCAATTTTTTCACGATAGATTAACAGCCGATTTACACGTTTCTATGAGACACGGTTCCCAACTCTCCGGAagaaaccaaattttaaataaattcgccGCGCCGTTTGGCGATGTTGAACCAAGATTGTATCAATCGTATCAATGCTCATTTTGCCACAAAATGTTTCAAGACGAATACTTACACCATCTCCATGTTTTAAAGGAACACAACGAATCCAGAGAagGGGAGTATTTAGTAACATCAACATCGccaaatttttcatataaaagtATATCCCCTCAAGATGGCCTCAAAATGGTTCCTAATATTCCTTGCGAAGTTTGCAACCGATCAGATTTTACAACCGAATCAGAACTTTTAGCCCACAAAAAGCTGCATCAAACACACGTCAAAGCTAAAATAGGGGCTGTTAGCCTTCAGTGCGCGTATTGCAACGAACATTGCAAGTCAAGAAGCGATTTAGAAAATCATATGAAAAGCCATCAAGTATCTTGCGGTAAAGGAAAACACAAATGCAATATTTGCGATGAGATTTTTTCATCCGCCATCACTTTAGCCGATCACAAATTAACTCATTGCAAAATAATCTCCGGAAACACGTGTACGCAGTGCAAAACGGTTCTAGAAGATGAACAATGTTTTTACACCCACCAAATGCAGCACAATAACTCTTCATCGATCGCAAAGGGTCACTCTCAAATCCCTTTGCCTGCAAATTGTGTTATTTGCTGCCAAACGCTTCAAACAGACGTTGAGGTTAGGTTACACGCGAAGTTCCATTTAAGACATATTTACCAGAAGGAATTTCTTTGCGTAATGTGCAATAAAATCTACGAGAATCAActccaagaaaaaaataatggcGTTTCTATTTCGATTTGTAAAGATTGTAAGATGACTTCGAACGGAACGAGTTATCAAATACAAAAGGATTATAAGAATTTTGTCGAATACGAAAAAGAACAAGACGTCAAATTGCGCCATATGGAAGATTCAAATTTAGTTTGCAAGATTTGTAGAAATGTATTTTCAACCCAACAAAAACTTCAGGTGCACTTAATTGAGCACAATTTTATGGGTATGGGTCAATACCGTTGTTACATTTGTTCTTCAGTTTTCACGACGGCGGCCGGCCTTCAAGGTCACATCGTAGGTCACGGATTGGCACAAAGTCCGTACGAATGTACCGAGTGCAACATGAAATTCTTTTTCGAAACGGAACTCGAAAATCATAGAATTAATCATGCGCAAAAATTGGGCGACTCAAAAAGCGAACAGTACAAAGTTTGCGAGAACTGCTCCGGTGTATATTTGGATAGCTTCTTTAGGGAACACGCGGAAGTGTGTTGCAAGGTTGAGATTAAAACGGAAGAAGTCGATGATAAACCCTATGATAAAACGGCGGACGATTGCGGTGATGCTGTTTAG
Protein Sequence: MSRRKQPNPAKLGDCELKMKPDELGKKMEESRSEKNEEEDEESEGSELGCLDDEDDGSGSVNGRASSPSSSNSSPVSCRSFGLSDATDVEETYTVGATATTPYECNVCKRAFSRSSVLGKHLQVHTDQLQFSCPYCRRLFKHKRSRDRHTKLHTGDKKYKCALCDSAFARSDHLKIHMKTHDNKKPHQCDLCNRGYNTAAALASHQQHHTKKELRCGSSSSRTTTTPSTPSPGQTKCSQIQVSTKRSSTDFDRCGRSFQNKRKLPTPNNDTTVPKQEVDLKIACMYCGKDFATMNLMYQHINIDHSSLFFQHSSLSYVCDLCSMKFDTSQTLREHLEGVHWKLNAVGTSSQAKATDLSRKRKCDEPEDNRKTEEIKNSPSTVSSPYDTNDKPCICSYCYAQMPNFKSFLVHMETHVSLNASSLIGYCPVCGEPGRDPIEFSSHIFGHVVSDATGRCCHQCKKSFDQLDQLQKHHFEAHSQSVYKCTLCGEYFENEIAIQVHFNNKHCNECKHYRCNLCPQQFFHDRLTADLHVSMRHGSQLSGRNQILNKFAAPFGDVEPRLYQSYQCSFCHKMFQDEYLHHLHVLKEHNESREGEYLVTSTSPNFSYKSISPQDGLKMVPNIPCEVCNRSDFTTESELLAHKKLHQTHVKAKIGAVSLQCAYCNEHCKSRSDLENHMKSHQVSCGKGKHKCNICDEIFSSAITLADHKLTHCKIISGNTCTQCKTVLEDEQCFYTHQMQHNNSSSIAKGHSQIPLPANCVICCQTLQTDVEVRLHAKFHLRHIYQKEFLCVMCNKIYENQLQEKNNGVSISICKDCKMTSNGTSYQIQKDYKNFVEYEKEQDVKLRHMEDSNLVCKICRNVFSTQQKLQVHLIEHNFMGMGQYRCYICSSVFTTAAGLQGHIVGHGLAQSPYECTECNMKFFFETELENHRINHAQKLGDSKSEQYKVCENCSGVYLDSFFREHAEVCCKVEIKTEEVDDKPYDKTADDCGDAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01097833;
90% Identity: iTF_01097833;
80% Identity: -