Otau001001.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Onthophagus taurus
Gene Symbol
Hr39
Assembly
GCA_000648695.2
Location
NW:64167-79108[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 1.4e+04 -8.7 15.7 51 171 111 231 101 283 0.68
2 4 0.086 5.9e+02 -0.8 2.5 52 129 217 288 203 339 0.50
3 4 1.1e-08 7.5e-05 21.9 0.0 1 66 409 475 409 484 0.68
4 4 7.9e-73 5.4e-69 233.2 0.2 203 408 537 737 468 737 0.91

Sequence Information

Coding Sequence
ATGAGGATGGCAGCAGATATGAGGCCACCCAACGTTTCCGTAACCCCCATCAACATGGATTCGTATCCCCCCGCGATTTCAAACGGGCATTCCCGAGGAGGAGAATCAAGACAACCTCCCGGGAGGAGATGCCAAACACCTCCTGGCCAAATCCTCGACCCAACTTTGGACGCATCCGATGCCGAAGTCGCCGAAATCGAATTCCAAATGAGTGTTAATATGCGCAGCAAAAAACAGAGGGGCAGCGACGAGTTACCGCGACCGATGTCTTGGGAAGGAGAACTTTCTGATGGGGAAAGGGAAATGTGCATTGATGAAACAAATAATTCGCagcttccAGAAAATCTTTCAATATCTCAATCAACAAAACACAATCAACTAAACTGCtcttcaaccgatttgaaagAAAGTCCAGTTCTGCGATTGAAACAGCCCATCACAAGTTCAGCTCATAATTACTCGATACATAGTACTCCGAGCAACTCGCCGCTGTTGAGTCAACGACAATCAAACCATCAGCTACCGCCCAGCGGGATTCCGTCCTCAATGATCAGTCACAAAGAACTGATGCACAAAGCTCTCAATGTTCCGCCGACTCCCAGCCCGGACTCAGCCGTTCATTCTGCTTACAGCGTTTTTAGTTCGCCCAATCAAAGCCCATTAACTCAACGACACGTTACTCTCACCCCGAATTTAAGCAGAAATAATAGTGATGCATCCCATTCGAGTTGTTATAGTTGTTCGAGTGTTTCCGTTTCCGTTTCGCCCACTCAGCAATTTTCACCTACACATAGTCCTATacagggTAGACATAATGTACCAAACATACACAATAGTCCATTACATCACCACGGAGTATTATATCGTAGCGTGCAAGATGATCAGAGTGTGCATTATTCGAATACTGAACACGAAGGTTTATTGTTGGATGAACAGGAAGATAAATCCGGGTTGGTCCACGCGAATCCTCTGACTGCGCAAACGGGGATTTCTCGCCAACAGTTAATAAATAGCCCGTGTCCGATTTGTGGTGATAAAATTTCTGGATTTCACTACGGAATTTTTAGCTGCGAATCGTGCAAGGGCTTCTTTAAACGGACTGTGCAAAATCGGAAGAATTATGTATGTCTTCGGGGCGCTGCCTGCCCTGTTACGGTTGCGACGAGGAAAAAATGTCCCGCGTGTCGATTCGATAAGTGTCTTAAATGTGGAATGAAATTAGAAGCGATACGAGAAGATAGAACTCGAGGTGGCCGATCGACTTATCAATGTTCATATTCATTGCCTCCTTCATTAACGGGCCACGGGGATCTCCGCGCGAGCTCGCAAGGTGATCTTAGGCACGGTTTAGGCGAACATTCCCATTTAACTGTCAAGTTGGAACCTCCGGATGTGGGGATATCCCCCCATTTATCCAGTAAAAGGTTGGGTTCGCGACATGAAATTCCACCATTATTGCAAGAAATAATGGGAGTGGAGCATTTATGGCATTACAGCGAATCCGAACTTAACAAATTAAACTCGGAGGGGACTTTATCAAGGGAAGGTTCCACGATCCATAACCTTTCAACGCATCCATTATTGGCCGGGACGGGTTTGGCAGGTTCCGCGGATACCAACCCGGATTTCGTTGCAAATTTGTGCAATATTGCTGATCATAGACtgtataaaattgttaagtgGTGTAAAAGCTTgccgttatttaaaaatatatccatCGACGATCAAATTTgccttttaataaattcttggtgcgaattattattattttcttgttgttttcGCTCGATGGAAAATCCGGGCGAGATTCGGATATCTTTGGGGAAATCATTGACTTTGGCACAAGCTCGCGATTTAGGCATGCAGGCATGCATCGAGCGAATGTTAAATTTTACTGAGCAATTGCGGAGGTTAAGGGTCGATAAATACGAATATGTTGCGATGaaagttattgttttgttaacTTCTGaTACATCTGAGTTAAAAGAGGCCGAAAAGGTTCGCGCCTCCCAAGAGAAAGCTTTAAAAGCCCTTCAAGATTACACCCTCGTTCATTATCCCGACTTACCAGCGAAATTTGGGGAGTTATTGTTGAGAATACCAGAGTTGCAACGAACTTGTCAGGCTGGGAAAGAGTTGTTGACGATAAAAACGAAAGATGGGGAAGGTccaagttttaatttgttgatgGAACTGCTGCGCGGTGACcactaa
Protein Sequence
MRMAADMRPPNVSVTPINMDSYPPAISNGHSRGGESRQPPGRRCQTPPGQILDPTLDASDAEVAEIEFQMSVNMRSKKQRGSDELPRPMSWEGELSDGEREMCIDETNNSQLPENLSISQSTKHNQLNCSSTDLKESPVLRLKQPITSSAHNYSIHSTPSNSPLLSQRQSNHQLPPSGIPSSMISHKELMHKALNVPPTPSPDSAVHSAYSVFSSPNQSPLTQRHVTLTPNLSRNNSDASHSSCYSCSSVSVSVSPTQQFSPTHSPIQGRHNVPNIHNSPLHHHGVLYRSVQDDQSVHYSNTEHEGLLLDEQEDKSGLVHANPLTAQTGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLKCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTGHGDLRASSQGDLRHGLGEHSHLTVKLEPPDVGISPHLSSKRLGSRHEIPPLLQEIMGVEHLWHYSESELNKLNSEGTLSREGSTIHNLSTHPLLAGTGLAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMENPGEIRISLGKSLTLAQARDLGMQACIERMLNFTEQLRRLRVDKYEYVAMKVIVLLTSDTSELKEAEKVRASQEKALKALQDYTLVHYPDLPAKFGELLLRIPELQRTCQAGKELLTIKTKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01098567;
90% Identity
iTF_01098567;
80% Identity
iTF_01098567;