Basic Information

Gene Symbol
dmd-4
Assembly
GCA_000648695.2
Location
NW:384553-385648[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-25 1.9e-21 75.3 10.9 1 47 8 54 8 54 0.98
2 2 0.034 2.3e+02 1.4 0.9 29 35 232 238 230 242 0.84

Sequence Information

Coding Sequence
ATGCTTCAAAGTAGATCTGCACGAGTTCCGAAATGCGCTCGATGTAGAAACCATGGGATGATTTCTACTTTAAGGGGACATAAGAAACAGTGTATTTATAAGAATTGTTCGTGTACTAAATGTGGGTTGATTAAAGAACGACAAAGGATTATGGCCGCTCAGgtCGCTTTAAAACGTCAACAAGCAGCTGAAGACGCAATTGCCCTCCATTTAGCGGCAGCAGAAAATGGCACAACCTACGATTATCTCCCACCTGGAAAAATTTTTGGGATGCAAGTTACATCTCCTATGGCGGAATCCCCAGATCTTCCTAAAGGACGTCCTGTAACACCTGAAAAACCATCCGAAGAAATTTCGGTTAGTCCTGCATCTATCGATATGCTTTGCAAGctttttccaaataaaaaaCGATCCGTTTTGGAgttagttttaaaaagatgtaatcatgatttattaaaagccATCGAACATTTCAATTTGGCCAACGCTAAGAAAACAGATGgggaaaagaaaattgttgatgaaGGGGGTGAGGATGACTACGTATCGGCTTTTAAACCGGTTTATGGGAAAATGGGTCCCCATGGGAATTTATTGGCGGGAAGTAAAGTTTACATGCATAGTATTTACCCATTTTTATCGCTTTTTAACCCCCAACCTGTTTTACCAAGTCCAGTTTATGTCCCAGGATTTTGCGATTGTAATCAATGCAGGTACAGTTTACATTCAAACCCtcgaaattaa
Protein Sequence
MLQSRSARVPKCARCRNHGMISTLRGHKKQCIYKNCSCTKCGLIKERQRIMAAQVALKRQQAAEDAIALHLAAAENGTTYDYLPPGKIFGMQVTSPMAESPDLPKGRPVTPEKPSEEISVSPASIDMLCKLFPNKKRSVLELVLKRCNHDLLKAIEHFNLANAKKTDGEKKIVDEGGEDDYVSAFKPVYGKMGPHGNLLAGSKVYMHSIYPFLSLFNPQPVLPSPVYVPGFCDCNQCRYSLHSNPRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01097484;
90% Identity
iTF_01097484;
80% Identity
-