Otau007168.1
Basic Information
- Insect
- Onthophagus taurus
- Gene Symbol
- tfip11
- Assembly
- GCA_000648695.2
- Location
- NW:222873-234332[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-93 1.3e-89 300.1 10.4 1 275 830 1101 830 1101 0.97 2 2 0.31 2.1e+03 -2.4 0.1 244 270 1115 1141 1106 1146 0.64
Sequence Information
- Coding Sequence
- ATGTCGGAGGAGGAAATAGAGAAGTTTGAGATAACCGATTTCGACATAGAAAATGAGTTCAACATAAACCGTTCGCGACGGAAACAAAccaaacaacaacaaatttatgGAATTTGGGCTGATGATagtgatgaagaagaagatgcGAGACCTTCTTTTAAATCTAAAGCTCAAAAAAGCTATTCTGCACCTATCGGATTTGTTGCAGGTGGGGTTCAACAATCTGGTAAGAAAAAAGaggaaatgattaaaaaagagGGTGATGGTTCTGATGATGATGAGGCGGGAACTTCTTATGGTGTTAAAAATAGTAGTAGTGAATCAGAAGAAGAGGGATTTTCGAAGAGAggTTTTGGATCTTCAAAAAAACAACCAACACAAGCGACTGTAACTGAAATAACAGCCGATATCGCCGGATTAAGAAGTAAAAAgggttttgttaataataagatGAAAAATGAAGGAGTTGGAAATTGGGAGAAACATACAAAAGGAATTGGGGCTAAATTATTACTTCAAATGGGTTTTAAACCAGGGAAAGGTCTTGGGAAGGATTTGCAAGGTATTTCAACTCCTGTTGAAGCACATTTAAGAAAAGGTAGAGGAGCTATTGGTGCTTATGGGCCtgaaaagaaaacaactttaataaaaaaagCTAATCTTCAGATTGAGGATCAGGAGGAAGAGCAAGAAACTAAATGGAAAAAGAATGATGGAGGAAAGAAGACTCGTTACTACTATAAAAGCGTTGATGATGTCATAGAAAAAGGTAAACGTCCTGGAGCTAATAGAAATTTGGGACCGGCAAGtGAGCTGTCTAAGGTAAAAGTAATCGACATGACGGGGCCTCAACAAAGAGTTCTCAGCGGATATCACGCATTGAGTGGTTTAAAAGCACCTCCCGGAGTGGAAAGATTCGAAGATGTTGTTCACAAGAAATGCACCAATTTTACTCTTCCAGAAATACAACATAATTTGGATTTATTAGTTGATATGTGCGAGcaggaTATTATTAGAATTGATAGAAACACAAGAAACAATCAAGATAAACTCCAATTTCTTAAACAAGATGAAATTAATGTGAAGAACACTTtgattaaagaagaagaaactgCTGAAACTTTAAGTGAAGTTTTAGAAATAGTCAACAAACTTATGGATACATCTTTAGGGTTATCACTTGGTCAAGTTGCtggtatttttaaacaattacagAACGCCAAAAAACGCATCAATTTCGTGGTGGTGAATCGTTTTGTGAATATTTTCTTGGCGTTTTATCGATTGAGGGGTTGTTTTAGTGCCATCATGTCGGAGGAGGAAATAGAGAAGTTTGAGATAACCGATTTCGACATAGAAAATGAGTTCAACATAAACCGTTCGCGACGGAAACAAAccaaacaacaacaaatttatgGAATTTGGGCTGATGATagtgatgaagaagaagatgcGAGACCTTCTTTTAAATCTAAAGCTCAAAAAAGCTATTCTGCACCTATCGGATTTGTTGCAGGTGGGGTTCAACAATCTGGTAAGAAAAAAGaggaaatgattaaaaaagagGGTGATGGTTCTGATGATGATGAGGCGGGAACTTCTTATGGTGTTAAAAATAGTAGTAGTGAATCAGAAGAAGAGGGATTTTCGAAGAGAggTTTTGGATCTTCAAAAAAACAACCAACACAAGCGACTGTAACTGAAATAACAGCCGATATCGCCGGATTAAGAAGTAAAAAgggttttgttaataataagatGAAAAATGAAGGAGTTGGAAATTGGGAGAAACATACAAAAGGAATTGGGGCTAAATTATTACTTCAAATGGGTTTTAAACCAGGGAAAGGTCTTGGGAAGGATTTGCAAGGTATTTCAACTCCTGTTGAAGCACATTTAAGAAAAGGTAGAGGAGCTATTGGTGCTTATGGGCCtgaaaagaaaacaactttaataaaaaaagCTAATCTTCAGATTGAGGATCAGGAGGAAGAGCAAGAAACTAAATGGAAAAAGAATGATGGAGGAAAGAAGACTCGTTACTACTATAAAAGCGTTGATGATGTCATAGAAAAAGGTAAACGTCCTGGAGCTAATAGAAATTTGGGACCGGCAAGtGAGCTGTCTAAGGTAAAAGTAATCGACATGACGGGGCCTCAACAAAGAGTTCTCAGCGGATATCACGCATTGAGTGGTTTAAAAGCACCTCCCGGAGTGGAAAGATTCGAAGATGTTGTTCACAAGAAATGCACCAATTTTACTCTTCCAGAAATACAACATAATTTGGATTTATTAGTTGATATGTGCGAGcaggaTATTATTAGAATTGATAGAAACACAAGAAACAATCAAGATAAACTCCAATTTCTTAAACAAGATGAAATTAATGTGAAGAACACTTtgattaaagaagaagaaactgCTGAAACTTTAAGTGAAGTTTTAGAAATAGTCAACAAACTTATGGATACATCTTTAGGGTTATCACTTGGTCAAGTTGCtggtatttttaaacaattacaggAACGACATATTGATGAATATTGTCAATATGGATTAGGTGAATTAGCTCCAGGTTTAGTAGGTCCATTATTAACATCAGCTTTGGCAAGTTGGCAACCTTTAAGTTCACCAAGACAATACACGGACCTGTTTAGGCAATGGAAGGAGATATTGGAAAAGCCGCTTCAACGTGGGACCCTTGAAGGTAATTGTATGGGAATTCAGCCATTTGATAGTCTCTTATGGCACACGTGGGTTCCTGTTGTCAGATCATGCATTAGTGTTTGGAGGGCTAGAGATTGCGAcccattaatttatttattggaagCGTGGAAACCATTACTTCCAGTCTGGTTGATGGATAACGTTTTGGATCAATATGTTATGCCGAAATTAATAGCTGAAGTTCAAAGTTGGGATCCGTTAACTGATACTGTTCCAATTCATACTTGGGTACATCCTTGGATACCTTTATTagatgttAAATTACAAGATAAAATTTATCCAATAATCCAAGAAAAATTAGGAGTTTGTTTAGCAAATTGGCACCCTTCTGATAGATCTGCTAAACCAATGTTAAAACCATGGCAAAGAGTACTTCCAGAAGGATCTTTCGTCgcctttttattaaaacatataGTTCCAAAATTACAACTATGTAtgcaacaatttattatttatcccCATCAACAACCATTagaaccATGGCATTGGGTTATGGATTGGAGCGATATGCTTTCAGTAGGGAACATgactttaattttagataaatttttctttccacGTTGGCTTCAAACTCTAGCAATGTGGTTAAATCAAAACCCAGATTATGCTCAAGTAACCGATTGGTATTCAGGGTGGAAAAGAATGATGTCCgatcaattattaaaacaaccaaccataaaagataattttcaTAAAGCTTTAGAAATAATGAATAGAGCCGCTTCGTCGGGGCACCAACCTGGGGCTAAAGAATCCGTGTCTTATTTAGCAAATATAGAAACAAATATACCTTTAGCACCTCCCCCACCGAAAATATCGTCGTTTGCAGAAACCGTTAGGACAGCTAGCCAAATTCCTCAAGGTTTTAAAGATTTAGTGGCGAAAAGATGCGAAGAAAAAGGGATTTTGTTTGTTCCTATTCCTAATAAATATCACGAAGCTAAACAAGTTTATCGATTAGGATCTAATGGAGTACAATGTTATATTGATAGAAACGTTGTTTTTTATACTCAAAATAATTCCACTTGGTTACCAACTTCATTAAATCGATTGTTAGATATGGCGTGA
- Protein Sequence
- MSEEEIEKFEITDFDIENEFNINRSRRKQTKQQQIYGIWADDSDEEEDARPSFKSKAQKSYSAPIGFVAGGVQQSGKKKEEMIKKEGDGSDDDEAGTSYGVKNSSSESEEEGFSKRGFGSSKKQPTQATVTEITADIAGLRSKKGFVNNKMKNEGVGNWEKHTKGIGAKLLLQMGFKPGKGLGKDLQGISTPVEAHLRKGRGAIGAYGPEKKTTLIKKANLQIEDQEEEQETKWKKNDGGKKTRYYYKSVDDVIEKGKRPGANRNLGPASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVERFEDVVHKKCTNFTLPEIQHNLDLLVDMCEQDIIRIDRNTRNNQDKLQFLKQDEINVKNTLIKEEETAETLSEVLEIVNKLMDTSLGLSLGQVAGIFKQLQNAKKRINFVVVNRFVNIFLAFYRLRGCFSAIMSEEEIEKFEITDFDIENEFNINRSRRKQTKQQQIYGIWADDSDEEEDARPSFKSKAQKSYSAPIGFVAGGVQQSGKKKEEMIKKEGDGSDDDEAGTSYGVKNSSSESEEEGFSKRGFGSSKKQPTQATVTEITADIAGLRSKKGFVNNKMKNEGVGNWEKHTKGIGAKLLLQMGFKPGKGLGKDLQGISTPVEAHLRKGRGAIGAYGPEKKTTLIKKANLQIEDQEEEQETKWKKNDGGKKTRYYYKSVDDVIEKGKRPGANRNLGPASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVERFEDVVHKKCTNFTLPEIQHNLDLLVDMCEQDIIRIDRNTRNNQDKLQFLKQDEINVKNTLIKEEETAETLSEVLEIVNKLMDTSLGLSLGQVAGIFKQLQERHIDEYCQYGLGELAPGLVGPLLTSALASWQPLSSPRQYTDLFRQWKEILEKPLQRGTLEGNCMGIQPFDSLLWHTWVPVVRSCISVWRARDCDPLIYLLEAWKPLLPVWLMDNVLDQYVMPKLIAEVQSWDPLTDTVPIHTWVHPWIPLLDVKLQDKIYPIIQEKLGVCLANWHPSDRSAKPMLKPWQRVLPEGSFVAFLLKHIVPKLQLCMQQFIIYPHQQPLEPWHWVMDWSDMLSVGNMTLILDKFFFPRWLQTLAMWLNQNPDYAQVTDWYSGWKRMMSDQLLKQPTIKDNFHKALEIMNRAASSGHQPGAKESVSYLANIETNIPLAPPPPKISSFAETVRTASQIPQGFKDLVAKRCEEKGILFVPIPNKYHEAKQVYRLGSNGVQCYIDRNVVFYTQNNSTWLPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -