Basic Information

Gene Symbol
lilli
Assembly
GCA_000648695.2
Location
NW:2638905-2839129[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.2e-05 0.16 10.8 18.1 4 160 22 186 20 195 0.57
2 6 7.5e-15 1e-10 41.1 22.1 341 504 273 445 231 461 0.75
3 6 0.7 9.7e+03 -5.0 11.5 89 222 547 671 496 689 0.49
4 6 1 1.4e+04 -16.0 32.8 125 242 701 823 678 841 0.31
5 6 1 1.4e+04 -8.3 27.1 75 213 878 1003 861 1048 0.33
6 6 1 1.4e+04 -5.5 14.5 87 193 1033 1126 1006 1143 0.34

Sequence Information

Coding Sequence
ATGGTAGGAGGCGGTTACAATGCGCGATACAACCCCATGATAAAAGGGACGTTGTCTAGtgTGGATAGGGACAGGCTCCGTGAGCGTCAACGTCAAGCAAGGGCTCAAATGTCCTCGCAGGTTGCCGAACAGGATGGTGGACCAGGTGGACAGCCCCTTTTCGGAGCTCCAGTCCGGgTAAATCCATCCTCAAGCGATccattaacacaaaaaataatcagCAAATTTGGCGAATACCAACGAGTGGTACCATATGTGGAAAGTACCTTATTAAAAGGAGGTGGGGCGTTGCTCACGGGTATTCTATCGACCCCTATGATagaaaattcacaaaaaagcCCCGTCGGAACCACAAACTCGGTTTCCTCATCTTCGCCATCTTCATCTTCAAGACCTAATCAACAGCAACAACAACACCAAAGTTCCTCATCCTCTTCCACGTCCTCTTCAAATCCGCCGGTTTCATCGCGACTCCAACCTCCACCTGAATTCAAGAAGCCGCAGCAACAAAGCAATAGCCGACCACCTCCTCCAAGTCATCATCAACAAACGCACCAACGAGGTGGGGTTTTTATTAAACCTTCGGATGGAAAACCACCATATGAAGGACGGGGTGGATACCCTGGACAACCTGGAAAACATGGGAATGGAAACCATCGGTCTAACGGGATACATCCACCGAAAGGACCTCCCAATGGGGGGAATGGGAGTTCTACGTCACCGATGCCTTCCAATCGCCTGCACAATGTAGCACGTACTTTACCGAGGATACCTCTCGATCAgCACCATTTGTCGAGTAGTAGAGATGAAAGATCGTCAAATCCACGTGGTTCCGAAGAAGTTCAAAGTATATTTAAGgaaatgatcgacaatcgGCCGCCAGTAACCGCAATAGCAGCAACGCCACGTAATAACGACcaagaaaaatttcttttccatCACACTaagccTCAGGAAATATCAGTTCCAACATCATCGTCTTCAACATCAAATCAAAAACGTTTGGATAGGCCACAAACAGCTCGTGAATCGGcGGGTTTGCAGAGCGACCTCGAGATATCGGATAGCGATGATGAGCAGAAGAGGAGGGGTATTCTTCATCCGCACAAACCTATTATAAGaaTGTTATCACCAATTGCACAAACACCAGCTCCTCATTCTTCATCCAGTATGCACCAAGACATACCTGATCCACAAGAAGTTCGTTCTCCTCAAGGAACATCAAGTGGTTCGGATTCATCGGGTTCGGATAGCGATTCGAGTAGTGATGATTCTTTGGATGAAGTGGCGCCGTCCCTAAAACACTCGCCTCCTCCACCTGAACCAAAAGTTGAAGAGGAAAAGGAGGGTCGGTACACGTGGAATTTAAGCTCTTATTTACCACAACCAAACAACCCTCAACTCGGCCGAAGAACGGGGCAAAGTCCAAATCAACCGAGTCCAAATAATGCTGAATCGGATGATGaagaaatggttaaaaatttagatataaaaGAGGTGATAAATGAAGTGAGGACGGTACCGTTATTGGCTAATTTATCCGATACGGATGAAAGTgataaattaagtaataataataatgttaatagtgggaatgttaaaaagaaaagtggTTTGGTGGTGTTAAGTGATAATAGTGACAGTGAAAATGATACGGGGAGGACACCGAAGGTAAAACCGTCGAATCGAGCGACGGTTAGGGCTAAATTGATCGATAGTGATTCCTCAGAAAAAGAGGAAGTGATTGATAAAGAAGCTGAAGTACGGACTAGTACTGTTCAGTTACCGAAAAATAATAACGCGGTTGAATCTTCACCAAGCAAAAAACAACGAGGTAGACCGAAAAAGAACGTAGATAACAATGTTGTGGGTAGTAAACCGAAAAGAGGGCGACCCCCTAAAACACCTGCTGATTTAAGCGGATCTGAAAAGAAGAGAGGAAGACCACCATCAAAACCAAAACCACCTCTATCTCCATACAGTTCCGACGACGATGATAACAGCAATAAACCACCAAATCAAGTGTTTGGAAAACCTCATCCTGGGAGAAGAAGAAGGAAAGATTCTAGAGGTATATCAAACAGTTCATCGGATGAAAGTTATTatcacaataaaaaagaatcctCAAGAAAAACGCAAAAATCCTCAAATTATTCCGATAGCGATGAAGAGGTTGAAAATCGTAATCGGGCgcctttaaaagaaaatcaatcgTTACGAAATCAAAAACATATAGAATCTCAAAAGAAGAAACGTTCGGTACCGAAAAAACCACCGAAAAGTGATGCGATTGTAAAAACATCGGATTCGGATAGCGATTCGGATGTAACCAATAAATCGTTACCGAAAAAATTACCACCTCAGCGAAGTAACCGTACGATAAGTTCGAGTAGTGATAGCGATGACTCAAGAAGAAGTGATTCTTCAGATCGTGaacgaaaaaatattaaattagacATCGATTCAAACACAGTtcaagataaaaagaaaagtgatACGATAAGAAAACTCTTTCAACCGCCGAAAGGTGGTGGAAAAGGTGGCGGGAAAGGTGGTAAAGGTGGAAAAGGCGGTAAAGGAGGTGTTGAGGTGATAATCAAAGATGAAACGTACCAAAGGAGCAGTTCGTCGGTTGAAGACGAAATTGTCCCAATTAGgaccaataataataataacaattctaCAGAAACTAAAACGACCACAAAGACTGAGTTAccagaaaaatcaaaaacattaattaaacgaTTACCCGTACGCATCGAATTGAGCCGTTTAAGCAACTTAAccaaacaattaattaataagaaaaaatctgaagaattaagaaaatggTCTTCGTTATCAAACACCAGGCAACAGCAGccgcaacaacaacaacatcaacaacaaaatcaatCCAACCAAAATAATAACTCCAATAATAATAGCAACAACACCACCTTTGAGTTACCGAACGataataattctaataattCAAGACAATCGAGTACCTTAATTCAAAGTGATTGTGATCGACggactaaaaatttaaatgaaaatacaaatgataaatttaaaaaaatcccatTGGCGACGAAACCTCccgtttataataataaaatcaacgaGAATAGTGATGTTGAATCGACGAAAAAGTCGTCGTCGTGGAAGATGGATTTGCTAGAACCGATGGaccaaaaaatcaaaaaacgtAAACGGCACAATAGCAGTAGCTCATCGCTATCGACGACGAGCAATTTATCGCACAATAGTAGTGGGAGACGAAGAGATAAAGTCGATCATAAAAGTAAACGAAGAAAAGAGGAATGTATTAGTAGATCTCAGGATACATATCATCAAATCGGCAACGCTCCTTCGTCAAACCACGAAATGGAAGAGTACAAAATGAATATTCACGATTTGGGTGGTGATAGTCATGAGGAAAGGAATTGGCCACATCGATCTAGGGGGGAATATAATCCTTATTTTGAACCGCCAGACGAGGAAGATTCAGATAGggataaagatcgatttttaaatgaagctaaaagattgaAACATCTCGCTGATAGTGAAGCGGATGCTATACAACAATGTATGTTGTATTTAGAAGCAATACTTTACTTTATTCTAACCGGAAACGCCATGGAACAAGAAGCCCAATCGGACACCGCTGCCTTTACAATGTACAAAGATAcccttaatttaattaagtatatatcatcaaaatttaagaacCAACAAAATCCGTCGTTGACTGGGACCAAATTAGTTGCTTTAAGtttacgGTGCCAAGCACTGTTATACTACAAACTATACAAAATACGTGCTCAGGACGTAAAAGAAACTGAACGTCAAATATGGGAATTCCTGCAGAAGGTAAAACGCGACTCTAACCCTTTCTACACGATCTCAATGTCGAATACTGTGTGCCACCAGAACTCCGGGGCATTGGTGCACGCAGATGCGGCTTCCGTTGCTGTTCCTTCATCGACTGGCGGCGGTGGCCACGGTGGCGGTCAAGGGACGCCTTCACCTCTTTCACCGACGCCGTCACCGGCGAGCAGCATAGGAAGTGTCGGGGGTAGCAGTCAATCCTCCGGATATAGCAGCGGGGAATTAGCGGGACCGCCGCGGCATCATCACCATCCTGTGGTCGCTCCTGTACCACCTCAACAAGGAGGTGTTGGTCCACAACAACCCACTGTGGGACCACCACAACCAGCCCCAACGCCTTGTGTGCTAGTTCCTTTACCTATTTATACgttgattcaaaaacaaaCGCAGAATATttcgtattttattaattatcaagATTTATGGGAACAGGCTGAAGAACTTACTAAAAAACATCATTtagatatttttcatcatttggATCGGACATATAAGCCTTTATCGCTACATAGTTCTTTATCGGATTTGGTGGCGTATATGCAAGCTGggattaaatttgttagagAAGAGAATCGAAATAGTACGAATTATAGtcgataa
Protein Sequence
MVGGGYNARYNPMIKGTLSSVDRDRLRERQRQARAQMSSQVAEQDGGPGGQPLFGAPVRVNPSSSDPLTQKIISKFGEYQRVVPYVESTLLKGGGALLTGILSTPMIENSQKSPVGTTNSVSSSSPSSSSRPNQQQQQHQSSSSSSTSSSNPPVSSRLQPPPEFKKPQQQSNSRPPPPSHHQQTHQRGGVFIKPSDGKPPYEGRGGYPGQPGKHGNGNHRSNGIHPPKGPPNGGNGSSTSPMPSNRLHNVARTLPRIPLDQHHLSSSRDERSSNPRGSEEVQSIFKEMIDNRPPVTAIAATPRNNDQEKFLFHHTKPQEISVPTSSSSTSNQKRLDRPQTARESAGLQSDLEISDSDDEQKRRGILHPHKPIIRMLSPIAQTPAPHSSSSMHQDIPDPQEVRSPQGTSSGSDSSGSDSDSSSDDSLDEVAPSLKHSPPPPEPKVEEEKEGRYTWNLSSYLPQPNNPQLGRRTGQSPNQPSPNNAESDDEEMVKNLDIKEVINEVRTVPLLANLSDTDESDKLSNNNNVNSGNVKKKSGLVVLSDNSDSENDTGRTPKVKPSNRATVRAKLIDSDSSEKEEVIDKEAEVRTSTVQLPKNNNAVESSPSKKQRGRPKKNVDNNVVGSKPKRGRPPKTPADLSGSEKKRGRPPSKPKPPLSPYSSDDDDNSNKPPNQVFGKPHPGRRRRKDSRGISNSSSDESYYHNKKESSRKTQKSSNYSDSDEEVENRNRAPLKENQSLRNQKHIESQKKKRSVPKKPPKSDAIVKTSDSDSDSDVTNKSLPKKLPPQRSNRTISSSSDSDDSRRSDSSDRERKNIKLDIDSNTVQDKKKSDTIRKLFQPPKGGGKGGGKGGKGGKGGKGGVEVIIKDETYQRSSSSVEDEIVPIRTNNNNNNSTETKTTTKTELPEKSKTLIKRLPVRIELSRLSNLTKQLINKKKSEELRKWSSLSNTRQQQPQQQQHQQQNQSNQNNNSNNNSNNTTFELPNDNNSNNSRQSSTLIQSDCDRRTKNLNENTNDKFKKIPLATKPPVYNNKINENSDVESTKKSSSWKMDLLEPMDQKIKKRKRHNSSSSSLSTTSNLSHNSSGRRRDKVDHKSKRRKEECISRSQDTYHQIGNAPSSNHEMEEYKMNIHDLGGDSHEERNWPHRSRGEYNPYFEPPDEEDSDRDKDRFLNEAKRLKHLADSEADAIQQCMLYLEAILYFILTGNAMEQEAQSDTAAFTMYKDTLNLIKYISSKFKNQQNPSLTGTKLVALSLRCQALLYYKLYKIRAQDVKETERQIWEFLQKVKRDSNPFYTISMSNTVCHQNSGALVHADAASVAVPSSTGGGGHGGGQGTPSPLSPTPSPASSIGSVGGSSQSSGYSSGELAGPPRHHHHPVVAPVPPQQGGVGPQQPTVGPPQPAPTPCVLVPLPIYTLIQKQTQNISYFINYQDLWEQAEELTKKHHLDIFHHLDRTYKPLSLHSSLSDLVAYMQAGIKFVREENRNSTNYSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-