Osag004765.1
Basic Information
- Insect
- Onthophagus sagittarius
- Gene Symbol
- lrrfip2
- Assembly
- GCA_036711965.1
- Location
- JASERS010000001.1:71886250-71908653[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-107 1.7e-102 344.2 37.1 1 300 186 483 186 483 0.94 2 2 0.017 8.8e+02 0.4 5.1 120 171 481 529 480 557 0.79
Sequence Information
- Coding Sequence
- ATGGTCGCTGGACCTAAAAGTTCTTTGGCCGGTGCTTTTGAAGCGTTTGGGAAGTGTGCAAAAAGTTCGTCTTTGGCCGATTGTCTTCCCGATGTTGATTGTAATGGAATGGAGCATGTTGTTTTTAATTCCGCTGTCTATGCAGCCAAAAAATTTGTAAGTTTAACAATCTCTTTACTATTAACATATTGGTGTAACCGAAATATGGAGCGAAGTTCCAGTACTGATTCATTAGAGGATCTGTTGAATACTTTAACTCCTGATACGGacgaaaattttaatattgagTATAGAAATGGATTACAAAGGTCAAGGGAACCGACAAAATCACCTGTAttagaagaaaatgaagaaaacattcttgatttagaaaaaaagaaCATTGATACGTGCGAGGCGATTAATCCAAATGTAATTGGTGATTGTGAAAAGCGTGATATCGTTGATTCAACTGGTGGTTGTTCAAAACAACTTAAAACGAGCCGATCGCAAAGTGTTTGTTCTTTCGTTGAGGACGatgttattaatcaatttttggatAAAACCAACGAAAATGCTGAAGCTCGTATGTTGGCAAAAAGACAAGCTCGCGCTGAAGCCAGAGAATATCGCATGCGAGAGCTTGAAAGACAACAAAAGGAACAAGAGGAAAACGCTGATAGACAATTTGATATGCTTACCGAACCCATTGCAAGAGCCGCCAGAACTACAAGTTCACGGTACATGTCCAGCAGGAGGAGTTCGGAGGATTCACTTGAAGACGCCGGAAGCATTCGCGAATTAAAACATGAACTCAAAGAAGTTGAAGAAAAATTCCGCAAAGCCATGGTGGCTAATGCGCAGCTTGATAACGATAAAGCGGCGCAAACTTATCAATTAGAACTACTTAAAGacagattagaaGAATTGGAGGAAGAACATTCGCAATTACGTAGAGAACATAGGGACAAGTGTCGAGAACACGATCAATTAAAACGATTGAACGGAAGATTAAACGACGAATTGGCTGTGACGAAAGCGGAGCTGGAAGAGCGAGATAGATTAATTACCGAAAAAGGTTTAATTATCGTTGGCGAAGAGGAAGTCCAAGTGAACGAACAACCTGTGACTTCTGATGCTGCTACTTGTAACGGTCTTGGTACGCCAAAACGGGCTTTGGTGAGTGTGGAGAATGCACAACTTTTGGAGGCAGCCGGTGAAGGTAGTTTAGatgtCCGGTTGGCTCGTTTTGCCAAAGAAAAAAGCGAACTTCAAGATCAAATAAGTCATCTACGTTTAGAATTGGAAGAAGAAAGGAGTAAAAGAAGGAAATCAAACGCATCCGGCATAACATTAAACGGCCCAACATCCGAGGCAGATTTTGACATGATGGACATGCAAAGGGAAGTCTCAAAACAACTTGCTGAATATAAATTTCGTTCGCAAAAAGCGGAACAGGACGTCGCAACTCTTCAGGCGAACGTTGCGAGATTAGAAAGTCAAGTGATTCGGTATAAAGCCGCGGCGGAAATGTCCGAAAAATCGGAAGAAGCGCTCAAATCGGAAAAACGGAAGCTTCAAAGAGAGGCTCGGGAAGCTATGAATAGAGCGGAGGAGCTGGAAACGTCGAATACGCACTTGTTAAAGCGACTAGACAAACTAAAAAATGCGAAATCTGCACTTTTGAAAGAGCTTTGA
- Protein Sequence
- MVAGPKSSLAGAFEAFGKCAKSSSLADCLPDVDCNGMEHVVFNSAVYAAKKFVSLTISLLLTYWCNRNMERSSSTDSLEDLLNTLTPDTDENFNIEYRNGLQRSREPTKSPVLEENEENILDLEKKNIDTCEAINPNVIGDCEKRDIVDSTGGCSKQLKTSRSQSVCSFVEDDVINQFLDKTNENAEARMLAKRQARAEAREYRMRELERQQKEQEENADRQFDMLTEPIARAARTTSSRYMSSRRSSEDSLEDAGSIRELKHELKEVEEKFRKAMVANAQLDNDKAAQTYQLELLKDRLEELEEEHSQLRREHRDKCREHDQLKRLNGRLNDELAVTKAELEERDRLITEKGLIIVGEEEVQVNEQPVTSDAATCNGLGTPKRALVSVENAQLLEAAGEGSLDVRLARFAKEKSELQDQISHLRLELEEERSKRRKSNASGITLNGPTSEADFDMMDMQREVSKQLAEYKFRSQKAEQDVATLQANVARLESQVIRYKAAAEMSEKSEEALKSEKRKLQREAREAMNRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01098494;
- 90% Identity
- iTF_01098494;
- 80% Identity
- -