Basic Information

Insect: Oncopeltus fasciatus
Gene Symbol: -
Assembly: None
Location: Scaffold1114:109511-117654[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00026 0.016 15.7 3.3 1 23 66 89 66 89 0.98

2 15 0.013 0.79 10.4 1.4 1 23 95 118 95 118 0.94

3 15 0.00036 0.022 15.3 2.0 1 23 124 147 124 147 0.97

4 15 0.00012 0.0074 16.8 3.0 1 23 153 176 153 176 0.97

5 15 5.1e-06 0.00032 21.1 0.4 1 23 182 205 182 205 0.97

6 15 0.0006 0.037 14.6 1.6 1 23 211 234 211 234 0.94

7 15 2 1.3e+02 3.5 6.8 1 23 240 263 240 263 0.91

8 15 0.0011 0.068 13.7 3.9 1 23 269 292 269 292 0.94

9 15 0.00038 0.024 15.2 2.3 1 23 298 321 298 321 0.96

10 15 0.00038 0.024 15.2 3.5 1 23 327 350 327 350 0.98

11 15 0.022 1.4 9.6 4.5 1 23 356 379 356 379 0.93

12 15 9.5e-05 0.0059 17.1 3.7 1 23 385 408 385 408 0.97

13 15 2.3e-05 0.0014 19.0 1.6 1 23 414 437 414 437 0.97

14 15 0.00025 0.016 15.7 2.2 1 23 443 466 443 466 0.94

15 15 0.0071 0.44 11.2 4.5 1 23 472 495 472 495 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00026	0.016	15.7	3.3	1	23	66	89	66	89	0.98
2	15	0.013	0.79	10.4	1.4	1	23	95	118	95	118	0.94
3	15	0.00036	0.022	15.3	2.0	1	23	124	147	124	147	0.97
4	15	0.00012	0.0074	16.8	3.0	1	23	153	176	153	176	0.97
5	15	5.1e-06	0.00032	21.1	0.4	1	23	182	205	182	205	0.97
6	15	0.0006	0.037	14.6	1.6	1	23	211	234	211	234	0.94
7	15	2	1.3e+02	3.5	6.8	1	23	240	263	240	263	0.91
8	15	0.0011	0.068	13.7	3.9	1	23	269	292	269	292	0.94
9	15	0.00038	0.024	15.2	2.3	1	23	298	321	298	321	0.96
10	15	0.00038	0.024	15.2	3.5	1	23	327	350	327	350	0.98
11	15	0.022	1.4	9.6	4.5	1	23	356	379	356	379	0.93
12	15	9.5e-05	0.0059	17.1	3.7	1	23	385	408	385	408	0.97
13	15	2.3e-05	0.0014	19.0	1.6	1	23	414	437	414	437	0.97
14	15	0.00025	0.016	15.7	2.2	1	23	443	466	443	466	0.94
15	15	0.0071	0.44	11.2	4.5	1	23	472	495	472	495	0.96

Sequence Information

Coding Sequence: ATGAACTTCTCCTCTCTAGTAACTGTGAAAGTTGAGTCACCTGTCAACATCCCTAATGAGGGAGACCTGTTTTCTACAGTCAGCGAGACAAAGGATATGAAGATGGAAGATGAATTCTCCCAAGTATTGCAAGAGGATGACAACACCAAAAGTGATGAGCAATCTCCAAACTCAGCTCCACCTGACGAATTAAAGTATTCGTGTCAACACTGCGAGTATAAATCGACTTCTTCTGGCGATTTAAAGTTACACATGAAATCGAAACATTCCAGCAAAACAATTTATCACTGTCTTTACTGTGATTATAATTCTCCTTATTCTAGGAGCTTAAATAATCATATAATTGCTAAACATACTAGCGAACGGCCATATTCCTGCCCCCATTGTGATTACAGTGCAAAACTACCAAATACTTTAAAGAAACACATATTTACCAAACATACAGGACAAAGACCACATTCCTGTCCTCACTGTGAGTTTAGTGCATTTCAGCCGAGCAATTTAAAAAGACACATATTGACACGCCATTCAGGAGAAAGACCATATTCCTGTCCCCAATGTGACTATAGTGCAACTCAGTCTTCCAATTTAAAGGATCATATATTGTCAAAACATACGGAACAAAGACCACATTCCTGTCCCCATTGTGAGTACAGTGCAGCACAGTCACGCAATTTAAAGAGCCACATTTTGGCCAAACATTCAGAACATAAACCATATTCTTGCCACCATTGTGAGTACAGTTCAGCTCGTTTTTGCAATTTAAAGTTCCATATATTGGCCAAACATCTGAAACAAAAACCATATTCTTGCCCCCATTGCGAGTACTGTGCAGTTCAGCCTTATCATTTAAAGACACATTTATTGGCCAAACATACAGAACAAAAACCGTTTTCCTGTGCCAACTGCGAATACAGCACAACTCACTCTTCAAAATTAAAGGCACACATAATGAACAAACATTCAAAACAAAGACCATATTCCTGCCCCCATTGCGAGTACAGCGCAGCACAGTCACGCTGTTTAAAGAGACATATTTTGACAAAACATTCAGAACAAAAACCACATTTCTGCCCCCATTGCGAGTACACTGCGGTTCAGTCACGGTGTTTAAAGAGGCACATATTGGCCACACATTCAGGACAAAGACCATATTCCTGCCCGCACTGCGAGTTTTGTACAGTTCAGGCTGGCAATTTAAAAAGGCACATATTCACCAAACATTCAGGTCAAAGACCATATTCCTGTCCCCACTGTGAGTACAATGCAACTCAGTCTTCCAATTTAAAGAATCACATATTGTCCAAACATGCGAAACAAAGACCACATTCCTGCCCCCACTGTGATTACAGCTCAGCACAGTTATTCAACTTAAAGAATCACATATTGGCTAAACATTCAGAACAAAAACCATATTCTTGCCACCATTGCGAGTTTAGTTCAGTCTATTCGTATAGTTTAAAGGAGCACATATTGAACAAGCATTCAGGAAAATGA
Protein Sequence: MNFSSLVTVKVESPVNIPNEGDLFSTVSETKDMKMEDEFSQVLQEDDNTKSDEQSPNSAPPDELKYSCQHCEYKSTSSGDLKLHMKSKHSSKTIYHCLYCDYNSPYSRSLNNHIIAKHTSERPYSCPHCDYSAKLPNTLKKHIFTKHTGQRPHSCPHCEFSAFQPSNLKRHILTRHSGERPYSCPQCDYSATQSSNLKDHILSKHTEQRPHSCPHCEYSAAQSRNLKSHILAKHSEHKPYSCHHCEYSSARFCNLKFHILAKHLKQKPYSCPHCEYCAVQPYHLKTHLLAKHTEQKPFSCANCEYSTTHSSKLKAHIMNKHSKQRPYSCPHCEYSAAQSRCLKRHILTKHSEQKPHFCPHCEYTAVQSRCLKRHILATHSGQRPYSCPHCEFCTVQAGNLKRHIFTKHSGQRPYSCPHCEYNATQSSNLKNHILSKHAKQRPHSCPHCDYSSAQLFNLKNHILAKHSEQKPYSCHHCEFSSVYSYSLKEHILNKHSGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01096273;
90% Identity: iTF_01096273;
80% Identity: iTF_01096273;