Basic Information

Insect: Oncopeltus fasciatus
Gene Symbol: -
Assembly: None
Location: Scaffold1114:138347-154133[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0019 0.12 13.0 3.2 2 23 67 89 66 89 0.96

2 14 0.2 12 6.7 3.8 1 23 95 118 95 118 0.94

3 14 0.0021 0.13 12.8 2.8 1 23 124 147 124 147 0.97

4 14 0.00038 0.023 15.2 3.1 2 23 154 176 153 176 0.96

5 14 9.3e-05 0.0057 17.1 1.7 1 23 182 205 182 205 0.97

6 14 0.00058 0.036 14.6 1.2 1 23 211 234 211 234 0.94

7 14 1 63 4.4 0.2 4 23 243 263 243 263 0.89

8 14 4.8e-05 0.003 18.0 4.1 1 23 269 292 269 292 0.97

9 14 8.6e-06 0.00053 20.4 0.6 1 23 298 321 298 321 0.98

10 14 0.0028 0.17 12.5 2.3 1 23 327 350 327 350 0.93

11 14 5e-06 0.00031 21.1 3.4 1 23 356 379 356 379 0.98

12 14 2.9e-07 1.8e-05 25.0 1.7 1 23 385 408 385 408 0.96

13 14 0.0012 0.077 13.6 2.0 1 23 414 437 414 437 0.95

14 14 0.0031 0.19 12.3 5.1 1 23 443 466 443 466 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0019	0.12	13.0	3.2	2	23	67	89	66	89	0.96
2	14	0.2	12	6.7	3.8	1	23	95	118	95	118	0.94
3	14	0.0021	0.13	12.8	2.8	1	23	124	147	124	147	0.97
4	14	0.00038	0.023	15.2	3.1	2	23	154	176	153	176	0.96
5	14	9.3e-05	0.0057	17.1	1.7	1	23	182	205	182	205	0.97
6	14	0.00058	0.036	14.6	1.2	1	23	211	234	211	234	0.94
7	14	1	63	4.4	0.2	4	23	243	263	243	263	0.89
8	14	4.8e-05	0.003	18.0	4.1	1	23	269	292	269	292	0.97
9	14	8.6e-06	0.00053	20.4	0.6	1	23	298	321	298	321	0.98
10	14	0.0028	0.17	12.5	2.3	1	23	327	350	327	350	0.93
11	14	5e-06	0.00031	21.1	3.4	1	23	356	379	356	379	0.98
12	14	2.9e-07	1.8e-05	25.0	1.7	1	23	385	408	385	408	0.96
13	14	0.0012	0.077	13.6	2.0	1	23	414	437	414	437	0.95
14	14	0.0031	0.19	12.3	5.1	1	23	443	466	443	466	0.95

Sequence Information

Coding Sequence: ATGGACTTCTCTTCTCTGGTAACTGTGAAAGTTGAGTCACCTGTCAACATCCCTAATGAGGGAGACCAGTGTTCTACAGTGATCGAGACAAAGTATATTAAGATGGAAGATGAATTCTCCCAAGTATTACAAGAAGATGAAGACGACATCAAAAGTGATGAGCAATCTCCAAACTCAGCACCATTTGACGAATTAAAATATTGTGAGCACTGCAATTATAAGTCAACTTCTTCTGGCGATTTGAAATTACACTTGAAATCCAAACATTCTAGTAAAACTTTTTATCACTGTCTCTACTGTGATTATAATTCTCCTTATTCTAGGTGCTTGAAGAGTCATATAATTGCTAAACATACTAGCGAAAGACCATATTCCTGCCCCCATTGCGAGTACAGTGCAAAACTGTCAAACACTTTAAAGAAACACATATTTACGAAACATACAGGACAAAGATCACAATCCTGTCCTCATTGTGAGTTCACTGCATTTCACCCTAGCAATTTAAAAAGGCACATATTGACCAGACATTCAGGACTAAGACCCTATTCCTGTCCCCATTGTGACTATAGTGCAACTCAGTCTTTCACTTTAAAGGATCACATATTGTCAAAACATACAAAACAAAAACAACATTCCTGTCCCCACTGTGAGTACAGTGCAGCACAGTCACAAAATTTACAGAGTCACATACTGGCCAAACATTCAGAACAAAAACCATATTCCAGCCCCCATTGTGAGTTTAGTGCTGTTGAGCCTTATCATTTAAAGACACATTTATTGGCCGAACATACAGAACAAAGACCGTATTCCTGTCCCCACTGCGAATACAGCACAACTCACTCTTCCAAATTAAAGGCACACATATCGTCAAAACATACGGAACAAAGACCATATTCCTGTCCCCATTGCGATTACAGTGCAACACAGTCAGGCGGTTTAATGAGACATATATTGACTAAACATTCAGAACAAAGACCATATTCCTGCCCCCATTGTGAGTACAGTGCAGTACAGTCACGCTGTTTAAAGAGACACGTATTAGCCACACATTCAGGCCAAATATCATATTCCTGCCCCCACTGCGAGTTCTGTACAGTTCAGGCAAGCAATTTAAAAAGGCACATAATGACTCAACACTCAGGAAAAAATCCATATGCCTGTCCCCATTGCGACTACAGTACAACTCAGTCTTCCAATTTAAAGAATCACATGTTGTCTAATCATACGGATCAAAGACCATATTCCTGCCCCCACTGTGAGTACAGTGCAGAACAGTTATTCAATTTAAAACATCACATATTAGCCAAACATTCAGAAAAAAGACCATACTCTTGCCACCATTGTGAGTTCAGTACAGTTCAGGTGGGCCATTTAAAAAGGCACATAATAAACAAACACTCAGGACAGTAA
Protein Sequence: MDFSSLVTVKVESPVNIPNEGDQCSTVIETKYIKMEDEFSQVLQEDEDDIKSDEQSPNSAPFDELKYCEHCNYKSTSSGDLKLHLKSKHSSKTFYHCLYCDYNSPYSRCLKSHIIAKHTSERPYSCPHCEYSAKLSNTLKKHIFTKHTGQRSQSCPHCEFTAFHPSNLKRHILTRHSGLRPYSCPHCDYSATQSFTLKDHILSKHTKQKQHSCPHCEYSAAQSQNLQSHILAKHSEQKPYSSPHCEFSAVEPYHLKTHLLAEHTEQRPYSCPHCEYSTTHSSKLKAHISSKHTEQRPYSCPHCDYSATQSGGLMRHILTKHSEQRPYSCPHCEYSAVQSRCLKRHVLATHSGQISYSCPHCEFCTVQASNLKRHIMTQHSGKNPYACPHCDYSTTQSSNLKNHMLSNHTDQRPYSCPHCEYSAEQLFNLKHHILAKHSEKRPYSCHHCEFSTVQVGHLKRHIINKHSGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01096282;
90% Identity: iTF_01096282;
80% Identity: iTF_01096282;