Ofas013313.1
Basic Information
- Insect
- Oncopeltus fasciatus
- Gene Symbol
- -
- Assembly
- None
- Location
- Scaffold809:295579-319269[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.077 1.5e+03 -1.8 0.0 4 37 15 47 13 50 0.75 2 2 3e-09 5.7e-05 22.6 1.8 41 151 124 238 109 282 0.55
Sequence Information
- Coding Sequence
- ATGCCCCCATCTCGTAGTGTGCTTTCCATATGTTCCAGCGTTGAGCGGGACCGACTTCGCGAGCGGGATCGGCAGGCCCGAGCGCTCATGAACTCAGAGCCAGCGGCCACTCCAGGCGGCGGCCCACTCTTCGCCGCGCCCGTAAGGGTAGGAATACAGTCAATATTCGCCATTAAGGTACGCTTCGCTCCTGGTGTTTACATCGTCTGCGGAGTCGATAACCTTTGGATCCACCGACTCGTCCTTGAAGAGTTGATAGTCTCCCCTTACCCTAAGCCTCCAGAACCGGTTCTGGCAGTCCTTGTCATCCCGGGTGCTGAATTCCCAGATAAGCCCTACTCACGAGTTTATTTGTTGCAGGTGAATCCGAACCCTGGTGATCGCATGCGACAGCACATCCAGACCAAGCTAGGTGATTATGAGAAGGTAAAGCACCTCCTCGAGGAACCGAAGCAGCTGCTGGGATTCGATGGCCAGCCTCCGGCGAGTCCGGCGCCTGCCCCACCACAAACTCACTCTGCTCCCCGTCAGCATGAGTTCAAGAAGCCTCCGCATCACTCCATGCCTCAGCCGCGCCAGACCCATTCCGCCCATCACAATAGGAGCGGGGGTTTTGTGAAGCCTGCAGATGGGAAGGTCCCCTACCAAAGCCGCGGGTCTTTCCCGGTACAGCCGACGAAGCATGGGGAACAGAGGTCGAACGGGGTCGTCAACCCAGCCAAAGGACCTGGGATTCATCCTCATGCTCCTCGCCCCCCCAACAGGACCCAGCAACATCGCCCTCATCTCGAACTAATGTACAAGGATCAGCGGACTAGCGCCTCTACGAGTGATGTTGATCACATTTTGAAG
- Protein Sequence
- MPPSRSVLSICSSVERDRLRERDRQARALMNSEPAATPGGGPLFAAPVRVGIQSIFAIKVRFAPGVYIVCGVDNLWIHRLVLEELIVSPYPKPPEPVLAVLVIPGAEFPDKPYSRVYLLQVNPNPGDRMRQHIQTKLGDYEKVKHLLEEPKQLLGFDGQPPASPAPAPPQTHSAPRQHEFKKPPHHSMPQPRQTHSAHHNRSGGFVKPADGKVPYQSRGSFPVQPTKHGEQRSNGVVNPAKGPGIHPHAPRPPNRTQQHRPHLELMYKDQRTSASTSDVDHILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -