Ofas018852.1
Basic Information
- Insect
- Oncopeltus fasciatus
- Gene Symbol
- bab2
- Assembly
- None
- Location
- Scaffold514:240531-289365[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.9e-17 1.5e-13 50.2 0.0 2 40 347 386 346 389 0.90 2 4 5e-13 1.6e-09 37.4 0.0 1 39 400 438 400 441 0.95 3 4 9.2e-17 2.9e-13 49.4 0.0 2 45 456 500 455 500 0.98 4 4 1.3e-17 4e-14 52.1 0.0 2 42 508 549 507 551 0.95
Sequence Information
- Coding Sequence
- ATGGCGGGGCAGCACTACTGTTTACGTTGGAATAATTATCAGTCTAATATGACTTCAGTTTTCCATCATTTGCTGAAAACGCAGGCATTTGTGGATGTCACACTTGCCTGCAATGATCAATCACTCAAAGCTCACAAGGTTGTTCTCTCAGCATGCTCATCATATTTTCAAAAACTACTCCTGGAAAATCCTTGTAAGCATCCAACCATAATAATGCCTCAAGATGTGTGCTTTACTGATCTCAAATTTATTATTGAGTTTGTGTACAAGGGTGAAATTGATGTTTCACAAGCTCAATTACAGTCTGTATTAAAAACTGCTGACCAGCTGAAGATAAAAGGACTCTGTGAAGTTCCGGAAGGTAAGGAAGGTGCTGAAGTTACTCCACTCCCTCATAGAAGAACAATTTCCAGAGTAAGACAGAGGCGAATAGCAAAGAGAAGACTTCAGTATAGGCAGAGGCTTGCTCGGCAGGAAGCTACCATAATGCAAGCCCAGGAAGCTCCTCTTGTTTCATCTAGTGAAGTATCTTACAGTACAGTCCTTCCTCATACTCCTGGTAGTACTACTGATGTGGGGACCTGTACTGAAGAAACCAAAGAAATGGTTGTTGTGGCTGAAACTGCTTTGGTAATGACTTCCTCAGAATTAGTCCAACATCAAGTTACTGCTGAGATCGGGACTGAACCTGATGCAGAATTAACAGAACCATCTCCACCTACAGCTACATTAGTTGGTACACTTGATATGTCTCATACTGCTACTCATCGTGACATAGCAGTTGATGCTAGTGATCTAGGTGTGGATGTTGATGATGATGATAGTGTAAAAGTGAAGTTCGAAACATTAAGAGCAATGGATCAGGGTGATGCGATGGACATGGATCATCATATGCAAGATAGATCTTGTGGAGAAGATGGTATGCATACCATGATGATAACACCAGAATTGCTTGGATTAATACCCTCATCCCAATCAGAGACAAGTGATAGCAGCATCTCAAAGAATAATATAAATGGGAATGGTAAGTCTTGGAGACAAGAAGATATGGATGCAGCATTGGAAGCTCTTCGATCGGGTACCATGTCATTGAGTAAGGCATCATCTATTTATGGAATACCTTCTACCACTCTTTGGCAGAGAGCTCATAGGCTTGGTATTGAAACACCTAAAAAAGATGGACCTTTAAAAACATGGACTGAAGATAACCTCAATGTTGCATTGGATGCTTTGAGAACTGGTTCTATATCTGCCAACAAAGCCAGCAAGACTTATGGTATTCCAAGCAGTACATTGTACAAAATAGCTCGGAGGGAAGGTATCAGACTTGCAGCTCCATTCAATGCAGCTCCAACCTCTTGGGCTCCTGAAGATCTTGAGCGTGCTCTTGAATCTATCAGATCTGGACAGTCAACTGTTCAAAAAGCAGCAGCAGAATTTGGAATTCCTTCAGGAACACTTTATGGTCGATGCAAACGAGAAGGAATAGAACTTTCTCGAGCAAATCCAACTCCATGGTCGGAAGCTGCTATGAATCAAGCATTAGATGCTGTTAGAATTGGTCAGATGTCAATAAACCAAGCAGCAATTCACTTCAATTTGCCTTATTCATCATTGTATGGGAGGTTCAAACGGGGCAAATATGACAGCAATGGAGTCGACGAGAATGTTCCAACAGCAGTTGAAGCTAGCACAACTACAGAACCACCACCACCTCCACCCCCATCTAATGATCTCCTTTCCACAGCAAATGCGGGAAAGGTCTTCAGATGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHHLLKTQAFVDVTLACNDQSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFTDLKFIIEFVYKGEIDVSQAQLQSVLKTADQLKIKGLCEVPEGKEGAEVTPLPHRRTISRVRQRRIAKRRLQYRQRLARQEATIMQAQEAPLVSSSEVSYSTVLPHTPGSTTDVGTCTEETKEMVVVAETALVMTSSELVQHQVTAEIGTEPDAELTEPSPPTATLVGTLDMSHTATHRDIAVDASDLGVDVDDDDSVKVKFETLRAMDQGDAMDMDHHMQDRSCGEDGMHTMMITPELLGLIPSSQSETSDSSISKNNINGNGKSWRQEDMDAALEALRSGTMSLSKASSIYGIPSTTLWQRAHRLGIETPKKDGPLKTWTEDNLNVALDALRTGSISANKASKTYGIPSSTLYKIARREGIRLAAPFNAAPTSWAPEDLERALESIRSGQSTVQKAAAEFGIPSGTLYGRCKREGIELSRANPTPWSEAAMNQALDAVRIGQMSINQAAIHFNLPYSSLYGRFKRGKYDSNGVDENVPTAVEASTTTEPPPPPPPSNDLLSTANAGKVFR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01095913; iTF_01309542; iTF_01309286;
- 90% Identity
- iTF_01095913;
- 80% Identity
- iTF_01095913;