Ostr026716.2
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- sip1
- Assembly
- GCA_951800025.1
- Location
- OX637561.1:12013436-12022602[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-35 2e-31 110.6 2.0 1 173 365 518 365 524 0.95 2 2 8.4e-11 1.6e-06 29.0 0.3 125 181 556 608 552 610 0.87
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAAGTAATGCGGTTTGAAATCACCGACTATGATTTGGACAATGAATTCAATCCAAACAGAACCCGAAGAGCTAAAAAAGAGCACCAGATTTACGGTGTCTGGGCCAAGGACAGTGACGAGGAGGATAATGAAGATAATGTTAGACAAAGGTCTCGCAAACCCAAAGACTTCACGGCACCCATTGGTTTTGTGGCTGGTGGAGTACAACAGGCTGGCAAGAAGAAGGAGGAAAGTAAAGAAATTGAATCATCAGAAGCATCCACCTCCCGCCCCAAGTTTGCTGATAGCTCTGACGAAGATGAACAGAATGCCCCAGATGCTAGTGAGACTGCCGGTATTAGAAGACAGGGGCAGGGCATGAAGTCAGTCAACCTCGGAGGCAATGTGGGGACTTGGGAGAAGCATACTAAGGGTATTGGAGCAAAGTTACTGTTGAAGATGGGTTACCAACCAGGCATGGGTCTAGGTAAAGACCTGCAGGGTATCTCTGCACCTGTGGAGGCCACTGTCAGAAGAGGAAGGGGAGCTATCGGTGCCTATGGACCTGAGAAAGCTGCTCAAAAAGCCAAAAAAGAAGAGGAACTCCGTCGTCTGAAAGAGAAGGGAGATGAGAAAGAGACAAAAGAAAAGAACTACAACTGGAAGAAGTCGCACAAGGGTCGCTACTTCTATCGCGATGCCGCTGACGTCATACAAGAGGGTAAACCCACGATGCATACTATTACCAGCAACGAGCTCTCCCGCGTGCCTGTAATAGACATGACAGGGAAGGAGAAGCGAGTGCTGAGCGGCTACCACGCGCTGAgggccgccgcgccgcgcttcGAGCACGAGCCGCGACGCAAGTGTGACAACTTTGCCGCGCCGCAGCTGGTGCACAACCttgagctgatggtggaatgcTGCGAACagGACATCATCCAAAACGCCCGCGAGCTTCAAACAGCGGAAGACGAGATAGTTGTCCTAGAGAGAGACCTAGAGGAATGCAACATTAAGTTGTCTGAACAAGACAAGGTGATCTGCAAGGTGGAAGGTATACTAGAGCGCGTGGAGATGCTCAACAAGCCGGATGTGTCGCTGGAAAGGGCGCACGATGTGCTGGCAGAGTTGAAGGACACCTACCCCGTAGAATACGAGATGTTCGGTCTGGGCACCATAGCGGGTAACATAGTGAGCCCGCTGCTCAGCTCCTTACTCGCCACCTGGGAACCCCTCTCGGCCCCCGACGAGCACATCCCTACCTTCCTGAAATGGAGGAAGTTGTTGACTGAAGAGGCGTACAACAGTCTGCTGTGGCAACACTTTGTGCCTCAACTTACTGCGGCTGCTGAAACGTGGAACCCACGCATGCCAACTGCGATGCTCCGCGCCGTATCTGCATGGCAGGCCGCGTCACCCCCCTGGCTGTCCCGCGCATGCGTCACACGCTGCGTGGTACCACGAGTACTAGCGGCCGTGAGGGCCTGGGACCCCACCAACGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCATGATATGGCAGGTCAGTGCATGCGTCACACGCTGCGTGGTACCACGAGTACTAGCGGCCGTGAGGGCCTGGGACCCCCACCAACGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCATGATATGGCAGGTCAGTGCATGCGTCACACGCTGCGTGGTACCACGAGTACTAGCGGCCGTGAGGGCCTGGGACCCCACCAACGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCATGATATGGCAGGAGAAGCCTTAGCAAGCTCCGTATACCCTCTCATCCGCTCCCCGCCTGGCGGCCGCGCTGTCGGCGTGGCACCCGGCGGACGGGTCCGCGCGCGGGGTCCTGCGCGCCTGGCGCGGGGCCTGGGGGCCCGCCCTGCAGGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCATGCGCCACTTGA
- Protein Sequence
- MSDDEVMRFEITDYDLDNEFNPNRTRRAKKEHQIYGVWAKDSDEEDNEDNVRQRSRKPKDFTAPIGFVAGGVQQAGKKKEESKEIESSEASTSRPKFADSSDEDEQNAPDASETAGIRRQGQGMKSVNLGGNVGTWEKHTKGIGAKLLLKMGYQPGMGLGKDLQGISAPVEATVRRGRGAIGAYGPEKAAQKAKKEEELRRLKEKGDEKETKEKNYNWKKSHKGRYFYRDAADVIQEGKPTMHTITSNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCDNFAAPQLVHNLELMVECCEQDIIQNARELQTAEDEIVVLERDLEECNIKLSEQDKVICKVEGILERVEMLNKPDVSLERAHDVLAELKDTYPVEYEMFGLGTIAGNIVSPLLSSLLATWEPLSAPDEHIPTFLKWRKLLTEEAYNSLLWQHFVPQLTAAAETWNPRMPTAMLRAVSAWQAASPPWLSRACVTRCVVPRVLAAVRAWDPTNDTQPLHQWVLPWHDMAGQCMRHTLRGTTSTSGREGLGPPPTTRSRCTSGCCPGMIWQVSACVTRCVVPRVLAAVRAWDPTNDTQPLHQWVLPWHDMAGEALASSVYPLIRSPPGGRAVGVAPGGRVRARGPARLARGLGARPAGHAAPAHRAQAGPLSAACAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -