Basic Information

Insect: Oligia strigilis
Gene Symbol: clz9
Assembly: GCA_951800025.1
Location: OX637541.1:20629627-20631510[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-07 7.6e-05 23.4 0.0 2 37 16 51 15 56 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-07	7.6e-05	23.4	0.0	2	37	16	51	15	56	0.91

Sequence Information

Coding Sequence: ATGGTTCGAAATTACAAAAGGAAAACTGACAGAGGGGGGTGGAATGAAGAACAAATGAAATTAGCCATTCAAGAAGTATTAGATGGAAAAAAGGGTTATAAATTAGCCAGCAGGGTTTATAATGTCCCTCAAACTACACTCGAGCGCAAAGTTGAACAAGCGAGAAGAAATGAGAATAGTATACAAAATGTTAAGGTTGCCTTGGGTCCAATTTCAACAGTTTTTTCTGAAGAAGAAGAACAAGTACTTGTCACTTATTTAAAGGAAATGGAAGGAAGATTATTTGGTTTATCAACCTCAGAATTGCAGAAGTTGGCCTATGAGTTAGCAGTTCGTAACAACAAACAACATAAGTTTAATGATCAGAAAGAAAAAGCTGGAAAGGACTGGTTGCGTGGATTCCTTAACCGTCATCCTGAATTGAGTCTGCGAAAGCCGGAAAACACATCAGCGGCTCGGGCTGCCGGGTTTAACAGTGTATCAGTTGGACTATTTTTCGAACTGCTAGGAAAAGCGCTTGACGATCACCCTTTTACTCCAGATAGAATTTATAACTGCGATGAGACAGGTGTTTCAGTAGTGCCAAAATCACGATCAAAGGTGATTGCTGCAACTGGCAAAAAGCAAGTGGGTGCTTTGACGTCGGCCGAACGAGGCACAACTATAACGATTGAACTTTGTTTCAACGCTGCCGGGACATACTTACCTCCTATGTTTATTTATCCCAGAAAACGCATGAAACAAGAACTACTCAATGGAGCTCCACCGAATTCATGGGCTGAATGTTCAGATTCTGGGTGGATCACCGCAGAAATTTTCTTAAGATGGTTTCAGAAGTTTCTCAAATTTACAAACGCCTCTAAAAACAATCCAGTTATGCTTCTTTTAGATGGCCATGCTTCTCACACCCAAAACTTGCAGCTAATTGATGAAGCACGTGAACACGGAGTGACAATAATATGCTTCCCCCCACATACAACTCACAAACTACAGCCAGCAGATGTAGGCTTTATGCGACCTTTAAGTATCTTTTATGATCAGGCTATAACAGCATGGTTGAGATCAAATCCTGGGAAAGTAGTGACTCAATTTCAAGTGGCTGAACTATTCGGGCAAGCGTTTATTCGCGCAGCTACTATGCCAACTGCAATGAATGCTTTTAAAGCATGTGGAATCTCGCCTTTTAATGCACACATTTTTACCGATGCCGACTTCGTTGCTGCAGAGGCTACCGACATTGCATTAAATACTGAAAAGGAACCCGAAGCTGTTTCAACTTCGACATCATCGACAGCTGTAGTTCCTCAACATACACTAATAATCACACCGTCAGCTTCTGATCCTGAAACGGCAACTTGCACCGCCATATATTCTACTACAAACACACTACCTCAACCAACTGCTGCAAGCTTCTCTTCAGCACAGCAACAAACAGCAAATGATTCTTTGGATAACACAGCATTCCATCTGGTTAGCCCGAAACAGTTAATGCCTTATCCACGAATTTCCGAAAAAAGGCCAAGACAAGTTCGAAGAAGAGGAAAAACAGCTATTATTACGGCATCTCCGTATAAAGCAGAGTTAGAGGAAAGACAAAATAGTAAGAAAATAGTACAACCTAAACCAAaggtaacaaataaaaataaaccgaaAAAAGCAAATAAAAGACCTAAAAGAACCAAGGAAGCTGATGAAGGATCTGAGAGTTCTGAGGACGAAGATACAGAATGTCTGTACTGCCACGGCTTGTATTCCGAGTCTAGTGAAGGATGGATCACTTGCCAGATTTGCGGTAAGTGGGCGCATTGTGGCTGTGCAGGAGTAGAAGACAACGATGACGAAGCTGTCCATATCTGCCCGGTTTGTGAAGACAACGACGATTAA
Protein Sequence: MVRNYKRKTDRGGWNEEQMKLAIQEVLDGKKGYKLASRVYNVPQTTLERKVEQARRNENSIQNVKVALGPISTVFSEEEEQVLVTYLKEMEGRLFGLSTSELQKLAYELAVRNNKQHKFNDQKEKAGKDWLRGFLNRHPELSLRKPENTSAARAAGFNSVSVGLFFELLGKALDDHPFTPDRIYNCDETGVSVVPKSRSKVIAATGKKQVGALTSAERGTTITIELCFNAAGTYLPPMFIYPRKRMKQELLNGAPPNSWAECSDSGWITAEIFLRWFQKFLKFTNASKNNPVMLLLDGHASHTQNLQLIDEAREHGVTIICFPPHTTHKLQPADVGFMRPLSIFYDQAITAWLRSNPGKVVTQFQVAELFGQAFIRAATMPTAMNAFKACGISPFNAHIFTDADFVAAEATDIALNTEKEPEAVSTSTSSTAVVPQHTLIITPSASDPETATCTAIYSTTNTLPQPTAASFSSAQQQTANDSLDNTAFHLVSPKQLMPYPRISEKRPRQVRRRGKTAIITASPYKAELEERQNSKKIVQPKPKVTNKNKPKKANKRPKRTKEADEGSESSEDEDTECLYCHGLYSESSEGWITCQICGKWAHCGCAGVEDNDDEAVHICPVCEDNDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01094861; iTF_00843446; iTF_00843443; iTF_00843447; iTF_00889146; iTF_01338627; iTF_01338690; iTF_01338628; iTF_01338629; iTF_01338630; iTF_01338619; iTF_00710143; iTF_00710144; iTF_01028211; iTF_01363045; iTF_01028212; iTF_00276343; iTF_01043609; iTF_01043632; iTF_01043611; iTF_01043613;
90% Identity: iTF_01094861;
80% Identity: iTF_01094861;