Ostr009047.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- foxo
- Assembly
- GCA_951800025.1
- Location
- OX637544.1:11513478-11522055[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-14 4.5e-11 43.7 0.0 4 47 98 145 96 150 0.85
Sequence Information
- Coding Sequence
- ATGTCTATACAGGGGAGCGGTGGTTACCAGAGCCCGTGGTCGTCTCAGGGAGGGCACTCGGAGTTGGACGGCACGATTGAATTGGAACCTTTGGGCGAACTGACAGAGGTCGGTTTCGAGCCACAGACGCGCGCGCGGTCCAACACGTGGCCGCTGCCAAGGCCAGACAACTACGTCGAAGCGGCTGACGACACCGGCTCCAAGAAGAACTCCAATCAGAATCTGAGTGGTGCGCCACCCCTACCTTCAGTAGGTACCAAGAAGAATTCCTCCCGTCGGAATGCCTGGGGAAACCTATCCTACGCTGATCTCATCACCCAAGCCATCACCTCCGCACAGGACAACAGGCTCACGTTGTCCCAGATATACGAGTGGATGGTCCAGAATGTGCCATATTTTAAGGATAAGGGGGATAGCAACTCTTCGGCTGGATGGAAGGTTCACTCTTTGATACGAGAAGGTGGCATCATGCCATTTTGTCTGTTATATCGTGGTGTCTTATCTCAACGCCTATATTGCGACGAACAAATGAGCCTTTATTAA
- Protein Sequence
- MSIQGSGGYQSPWSSQGGHSELDGTIELEPLGELTEVGFEPQTRARSNTWPLPRPDNYVEAADDTGSKKNSNQNLSGAPPLPSVGTKKNSSRRNAWGNLSYADLITQAITSAQDNRLTLSQIYEWMVQNVPYFKDKGDSNSSAGWKVHSLIREGGIMPFCLLYRGVLSQRLYCDEQMSLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00185960;
- 90% Identity
- iTF_01029037;
- 80% Identity
- iTF_00123170; iTF_00121217; iTF_00373731; iTF_00172551; iTF_01439715; iTF_00363847; iTF_01440808; iTF_00905933; iTF_00374996; iTF_00038517; iTF_00120309; iTF_00830986; iTF_01092886; iTF_00726105; iTF_00036443; iTF_01526838; iTF_00037596; iTF_00906880; iTF_00147120; iTF_00071223; iTF_01525752; iTF_00122176;