Basic Information

Insect: Oligia latruncula
Gene Symbol: Kr
Assembly: GCA_948474745.1
Location: OX419712.1:9043684-9069889[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.7e-05 0.0026 18.5 4.4 1 23 282 304 282 304 0.98

2 11 0.11 7.6 7.5 1.4 1 23 311 333 311 333 0.97

3 11 0.33 23 6.1 0.1 1 23 337 360 337 360 0.97

4 11 0.12 8.4 7.4 7.3 1 23 367 389 367 390 0.96

5 11 1.6e-06 0.00011 22.8 0.5 2 23 396 417 396 417 0.98

6 11 2.3e-05 0.0016 19.1 3.8 1 23 423 445 423 445 0.99

7 11 1.1 76 4.4 1.9 1 22 451 480 451 484 0.84

8 11 0.0047 0.32 11.9 0.0 1 23 492 515 492 515 0.92

9 11 0.0052 0.36 11.7 0.3 1 23 521 544 521 544 0.92

10 11 3.4e-06 0.00024 21.7 1.0 1 23 553 575 553 575 0.98

11 11 2.7e-05 0.0018 18.9 0.4 1 23 581 604 581 604 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.7e-05	0.0026	18.5	4.4	1	23	282	304	282	304	0.98
2	11	0.11	7.6	7.5	1.4	1	23	311	333	311	333	0.97
3	11	0.33	23	6.1	0.1	1	23	337	360	337	360	0.97
4	11	0.12	8.4	7.4	7.3	1	23	367	389	367	390	0.96
5	11	1.6e-06	0.00011	22.8	0.5	2	23	396	417	396	417	0.98
6	11	2.3e-05	0.0016	19.1	3.8	1	23	423	445	423	445	0.99
7	11	1.1	76	4.4	1.9	1	22	451	480	451	484	0.84
8	11	0.0047	0.32	11.9	0.0	1	23	492	515	492	515	0.92
9	11	0.0052	0.36	11.7	0.3	1	23	521	544	521	544	0.92
10	11	3.4e-06	0.00024	21.7	1.0	1	23	553	575	553	575	0.98
11	11	2.7e-05	0.0018	18.9	0.4	1	23	581	604	581	604	0.96

Sequence Information

Coding Sequence: ATGGAAACGATGAGTTTAGGCAATGAGGAAGATATTAAATTTGATTTTGAACCGGCGAAAGCTATTTGTAGGTGTTGCTTGATGACGGAAAGACGAATGCTTGGCGCTGTTATGTTCGAAGCGTATTTTAAAGATCTTGCCGGGATTAACTTAACAGAGTCCGATGGTCTACCGCAGTGGTTGTGTTACGAATGCGCGACTCTCCTGCAGAAGTCGGTGAGGTTCAAGCATAAAGTGTTGCGAGCTCACACGATGCTGTACGAATATCTCACACGATGCGCTCCCTTCCCGATAGAGGCTCAAGATGAAGAGTTGTCCAAATACGCCAGTCCTCACCTGAGTACCACGAGTGTGCTGACCATAGATATAGTGGGCAAAGGCAGGGCCGGGTACCACCAGGTTCTAGAGCATGAAAAGCAAGTTCAGTCTTCAGGACTAGATGACATTGACATTCAGATGATCAGTAAGATGGAAGACGACGACATCGTGAAGGAGGAGAACGGCTTCTCAGACTACGAAGATAATATTACCTTAGAAGAatttagATCCGTAGCAACGAAGATGACAGAGGATGACATAGCGTCGTTGTTACAAGAGGTTCCCGCGCCCGTGGAGATCAAAGAAGAACGCCCCGCCAAGAGGAAGAAGACTAAAGAAGTTAAGGTTAAAAAGAAGAAAAAGGAAATTGAGTCAACTCCTGAAGATGGGATGATAGTTGAATCTAAATCTTCAATTAGAAAACCTATAGAACTGGACCCTACTAAGATAAGAATAGTCACCTTGAACCCTGAGGAGCAGATTAAGCATAGAGAGGAAGAAAGTAAGGCAGGCTTGAAGTTCCCGTTCCAATGTAATTTGTGCCATAAAGGATTTAACTTTGAGTCTAAATTACAAAATCACATGAGCAAACACAGCCCGTCTCGGGGCCCGTACGAGTGCAAGCTGTGTCGCATGCACCTGCCGACGTCGTACAGCTACAACGTGCACTCACTCATACACAACCGGCGCTACGAGTGCGTCGCGTGCGGCCGGCGCATGATCGACCGCGCCTCCATCATAGATCATTACAGAACTCAACATGAAGGATTCCTGACATTATTCACTTGCCATCTCTGTGGAAAAGTTTCAAATAACAACAAAACGCATAGAGGTCACATGCGGAACCACCACAGCGGCGACAGGCCCAAGTGTGACCAGTGTGGAAAAACTTTCATTAACAAAGACTCCTTAGTGGAACATCAGCAAATACACCAGGGGATCAAGAACTATGAGTGTGCAATATGCAACAAGCGCTTTAGAACGAGAACTCAAATCAAGCACCACCAGCTCACACACACGGACGTGAAGGACTACTACTGCGTCGAGTGCGATGTAAGCAGTGCTAGTTATTCTGTTTTTAGATTTAAATCAGCGCACAGTCTCAGGCAGCATCTGCAGAAGAGTTTAAAACACCGAGACAAGCAGAGTTTAAAATTCTCGTGCCCGCGCTGCCCCGCGCGCTTCCCGTCGGCGCGCGCGCTGGCGGCGCACGTGGGCGTGCAGCACGACGGCGTGCGCGCGCACGTGTGCGGCGAGTGCGGCGCCGCGCTCGCCTCGCGCTCCTCGCTCAGCAAGCACACGCACGCCGTGCACCGCGGCCTGCGCCCGCCGCCGCGCCACGTGTGCGACACGTGCGGGAAGGCCTTCCGGGGTAAGAGCGTGTTAACAAACCACGTGCGCACACACACGGGGGAGAAGCCATTTGAATGCGGCGAGTGTGGGCGCAGGTTCACGCAGCGCACGGCCATGCGCACACACGTCAAACTAGTGCACCTGAAGCTGAGGAAGTGTGCCAAGGTGAAGCCCGAGGTTCCCTTAGGGGCGCAGTCTCCGAAACTAGATGTGTTCAAACCTGAGCCGCTACTGGAGCCCTGGAGACAGCCTTGCGATGTCTACTTCCACGTCACCGCAGGCCCCTGA
Protein Sequence: METMSLGNEEDIKFDFEPAKAICRCCLMTERRMLGAVMFEAYFKDLAGINLTESDGLPQWLCYECATLLQKSVRFKHKVLRAHTMLYEYLTRCAPFPIEAQDEELSKYASPHLSTTSVLTIDIVGKGRAGYHQVLEHEKQVQSSGLDDIDIQMISKMEDDDIVKEENGFSDYEDNITLEEFRSVATKMTEDDIASLLQEVPAPVEIKEERPAKRKKTKEVKVKKKKKEIESTPEDGMIVESKSSIRKPIELDPTKIRIVTLNPEEQIKHREEESKAGLKFPFQCNLCHKGFNFESKLQNHMSKHSPSRGPYECKLCRMHLPTSYSYNVHSLIHNRRYECVACGRRMIDRASIIDHYRTQHEGFLTLFTCHLCGKVSNNNKTHRGHMRNHHSGDRPKCDQCGKTFINKDSLVEHQQIHQGIKNYECAICNKRFRTRTQIKHHQLTHTDVKDYYCVECDVSSASYSVFRFKSAHSLRQHLQKSLKHRDKQSLKFSCPRCPARFPSARALAAHVGVQHDGVRAHVCGECGAALASRSSLSKHTHAVHRGLRPPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECGECGRRFTQRTAMRTHVKLVHLKLRKCAKVKPEVPLGAQSPKLDVFKPEPLLEPWRQPCDVYFHVTAGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01533326;
90% Identity: iTF_00425742;
80% Identity: -