Olat007946.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- clz9
- Assembly
- GCA_948474745.1
- Location
- OX419685.1:393576-395825[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-08 2.5e-05 24.2 0.0 4 41 21 59 18 61 0.87
Sequence Information
- Coding Sequence
- ATGCCATCCGTGTACAGACGACAGCCTGGCAGTCGTCGATATGTCGACTACACCCAGGCAGATTTAAAAAAATGTCTGGATGCAATCCAATCAAAAGTGCTCACACAAAGAGCGGCTGCAGAGTTGTTTAACATTCCTCGCAGCACTTTGaaaaataaattaactcggaagcaccctaacaaaccaggtaaacctacaatttttactgaagaggaagaaaaggcgtttgaagctcacataacagcgctttcggaatatgggtttccgctgacagcattcgacctaaaaattataataaaaaattaccttgcatcccagggaagagttgtgaaaatttttaagaacaacattcctggtaaagactgggtggcttcttttctttcacgacatcaatctctttcacggcgacttgctaacaatatcaaaagagtccgagctcaagtgtcggaagatgtaatttccaattttatagaaaacatcgacaaagaactagaaagcgttccacctgaaaatatattcaactacgacgaaagcaacctttgtgatgacccaggaaaaaagaccatattatgcagaagaggaacaaaatatcctgaaacaatagtaaacgctacaaaagttaattttactgtcatgttctgtggcaatgccgctggggaagtagttccaccgttcatcgtttataagtcggatcacctctggTCGACTTGGACTGAAAATGGTCCCGAAGGTGCTCGATACAATAGAACAAAGAGCGGATGGATGGACAGCGCAACTTTTGAAGATTGGTTTCTCAATCATCTTATGCCAGTTCTTAAGAAGAAAAATGGAAGAAAAGTGGTGATTGGAGACAACCTTGCTTCACACATTAATAAAACAGTTTTGAAGGAGTGTGAGAAGCACAACGTTAGTTTTATTTGCTTGCCACCCAACGCAACACATATACTTCAGCCCCTAGACGTGGCATATTTTCGACCTTTGAAGTGCAAGTGGCGGCAAGTATTGCTTCAATGGAAGAACAGTCAACTGGGTAGGAAACTGTCGACTACACCTAAGGATCAGTTTCCACGACTATTAAAAACCGCTTTGGATTCTTTGACCGAGACCAAGGTGAATCTGATTGCTGGTTTCAGAAAGACAGGCATATACCCCGTTGACAAAGAGGAACCATTAGCTAGATTACCTAAACAAGATCGAATTATAAACGCAGGTCTTATCGGAAACTCTTTTATGCAAACATTAGTACAGAGCCGAGCTGAGGCGTGCCCAGAACAGAAAACAATTAGGAAAAAGAAACTTAATGTACCACCTGGAAAATCAATCTGTGCCACTGACCTTGCAGAAGCAGGTCCATCGGGTTTACAGCAGGCTAAAACTATAAAAGAAAAGAAAAGGGCAACAAAACGAAGACAACGCAACGTCTCTTCATCTTCAAGTTGCAGTGACAGGACCATCAGTCTAGCTTCCTCCACTGAAGACCACATAATGCCTTATGACTCTGAGGATGATGTTCTTCTGGCCAACTATATAAGTCACATTAGTGATGCTGATGCACCTGCATTTCGTGGCGGATTTTTTCTCCATTCACCTGTTCTTCAGGGAGATGTCATACCGCAGATGGAGTATGAGAGTGAATTAGAAGAGGGATGTGGCTCTCCTGTTCTTCAATTAAGAGATGTAGACCAACAGCTGCTTGATGGTTTTGAAGACTTCACTCCCCTTCAATCCATAGAGGATGTAAAGATCGTTGAAGAAAAATGTAGTGAAAGAGAGAAAAATCTAGATTTACCCGTCTTTGAACCTGAATCCAAACTGCAAGTTGACGATACCGTTGCAAAGAATAATAGAGCCCATTCTGCTCTTCATCTGGGAGAGAAAATGCAGGTGATTGTAGAAAGTTGTCGAGACAAAGACTTGCGGGTCTCGCCCGTACGTCAAATCGAAGAGTTACCGCAGGATACAATAGAGCCACCAGCTTTTCGTGGAGCTTCACGTCCTCGACTTGATCTAGACCTTGTTGTAGGCGACCATGTTCTAGTAACTTGGAACTCACGCAAATACCCAGGTCAAGTCTTATCAGTATCCGAGGAAGGAGCCTTTATAACATGTATGAAAAGAGGTAAGACGTACTGGCGGTGGCCCATGATTAAAGATGAACAGCTTTATAGTTGGGACCATATAGTGTGTAAGATTGGACCTCCTAAATTTGAAAAAAAGGGTTCTTTCTCTGTTCCAGAAATGAACGAGTGA
- Protein Sequence
- MPSVYRRQPGSRRYVDYTQADLKKCLDAIQSKVLTQRAAAELFNIPRSTLKNKLTRKHPNKPGKPTIFTEEEEKAFEAHITALSEYGFPLTAFDLKIIIKNYLASQGRVVKIFKNNIPGKDWVASFLSRHQSLSRRLANNIKRVRAQVSEDVISNFIENIDKELESVPPENIFNYDESNLCDDPGKKTILCRRGTKYPETIVNATKVNFTVMFCGNAAGEVVPPFIVYKSDHLWSTWTENGPEGARYNRTKSGWMDSATFEDWFLNHLMPVLKKKNGRKVVIGDNLASHINKTVLKECEKHNVSFICLPPNATHILQPLDVAYFRPLKCKWRQVLLQWKNSQLGRKLSTTPKDQFPRLLKTALDSLTETKVNLIAGFRKTGIYPVDKEEPLARLPKQDRIINAGLIGNSFMQTLVQSRAEACPEQKTIRKKKLNVPPGKSICATDLAEAGPSGLQQAKTIKEKKRATKRRQRNVSSSSSCSDRTISLASSTEDHIMPYDSEDDVLLANYISHISDADAPAFRGGFFLHSPVLQGDVIPQMEYESELEEGCGSPVLQLRDVDQQLLDGFEDFTPLQSIEDVKIVEEKCSEREKNLDLPVFEPESKLQVDDTVAKNNRAHSALHLGEKMQVIVESCRDKDLRVSPVRQIEELPQDTIEPPAFRGASRPRLDLDLVVGDHVLVTWNSRKYPGQVLSVSEEGAFITCMKRGKTYWRWPMIKDEQLYSWDHIVCKIGPPKFEKKGSFSVPEMNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00375140;
- 90% Identity
- iTF_01525962; iTF_00375141; iTF_01527105; iTF_01527106; iTF_01527107; iTF_00375140; iTF_01527108; iTF_00375142; iTF_00038698; iTF_00036620; iTF_00036621; iTF_00036622; iTF_00036623; iTF_01527103; iTF_01527104; iTF_01064599;
- 80% Identity
- -