Ofas025529.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- -
- Assembly
- GCA_963082905.1
- Location
- OY720408.1:6118519-6119187[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-11 6.2e-08 33.2 0.1 3 42 20 59 18 62 0.87
Sequence Information
- Coding Sequence
- ATGCCGCGAATATATAAAAAGAAACTGGGTACCCGTGAATACAGAAACTACTCTGAAGCGACGGTTAACGAGGCTCTAAGTCAAGTAGTTGACGGGAAGTTGTCCATCAGAGGTGCATCAGAACAGTATAATATATCTTATGGAACTATTTATAATAGATATAAAGGAATGCACATGAGAAAACCTGGCGCTCAGACAGTTTTCTCAGAATCTGAGGAAAAAGCTATCTTGAAATCAGCTGCAAAGTGTTCCGATTGGGGGTATCCTCTAACATTGCTGGATTTGAGATTTTTTGCAAAAGCTTTTCTAGATAAACAAGGGCGAGTGGTCACCAAATTCGAAAACAATCTTCCTGGAGTTGAGTGGGCATATTCCCTTTTACGTCGCCATAAAGACGAATACTCTCAAAGGGtatcaacaaatattaaaaaagcaaGGGCAAAAGTATCTCATgatagtataaataaatactttgacaaCCTTACACCAGTTATTAAAGATTTGCCGCCGTCCAATATATTTAATTATGACGAGACGAACATGAGCGACGACCCTGGAAAAAAACAAGGCATTTACAGGCGTGGGGTCAAATATCCAGAGAAGAATGTGAAATTGGAATTGCTAGTTTACAAACCTTGTATTTTCTTGGAATGTCGCTACGGCGAGTAG
- Protein Sequence
- MPRIYKKKLGTREYRNYSEATVNEALSQVVDGKLSIRGASEQYNISYGTIYNRYKGMHMRKPGAQTVFSESEEKAILKSAAKCSDWGYPLTLLDLRFFAKAFLDKQGRVVTKFENNLPGVEWAYSLLRRHKDEYSQRVSTNIKKARAKVSHDSINKYFDNLTPVIKDLPPSNIFNYDETNMSDDPGKKQGIYRRGVKYPEKNVKLELLVYKPCIFLECRYGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00356095;
- 90% Identity
- iTF_01030129;
- 80% Identity
- -