Basic Information

Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000021.1:13793502-13797638[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.6e-13 1e-10 43.2 0.0 10 79 22 107 15 114 0.80
2 14 9.2e-07 0.0006 21.4 0.0 31 79 118 164 117 171 0.89
3 14 9.2e-07 0.0006 21.4 0.0 31 79 175 221 174 228 0.89
4 14 9.2e-07 0.0006 21.4 0.0 31 79 232 278 231 285 0.89
5 14 9.2e-07 0.0006 21.4 0.0 31 79 289 335 288 342 0.89
6 14 9.2e-07 0.0006 21.4 0.0 31 79 346 392 345 399 0.89
7 14 1e-06 0.00067 21.3 0.0 31 79 403 449 402 456 0.89
8 14 9.2e-07 0.0006 21.4 0.0 31 79 460 506 459 513 0.89
9 14 9.2e-07 0.0006 21.4 0.0 31 79 517 563 516 570 0.89
10 14 9.2e-07 0.0006 21.4 0.0 31 79 574 620 573 627 0.89
11 14 7.8e-07 0.00051 21.6 0.0 31 79 631 677 630 693 0.89
12 14 9.8e-05 0.064 14.9 0.0 48 79 699 730 687 737 0.76
13 14 9.2e-07 0.0006 21.4 0.0 31 79 741 787 740 794 0.89
14 14 8.1e-07 0.00053 21.6 0.0 31 79 798 844 797 860 0.89

Sequence Information

Coding Sequence
ATGAGGTGTGCCGGGGAAGGGGGAAAGATAATAGAAACGCGACTGTACTCTACGAGAGAACGTTTCTGCGACGTGACACTATACTGCTCGCCGAGCTTCGCGACGCAAGTGCCGAATAAGGACACGGTCGAGCCGCAGAACATTCGCGGGGTGTCACTCAGGGCGCACAGAGTGGTGCTGGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCAACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGCGCACGAGGCGCACGGCGAGCCCGTGCTGGTGATCGACGGCGCCGAGCCGCGCCACCTGCGCGCGCTGCTCGACTACATGTACACCGGCGAGATGAACGTGCACCACGTGAGTGTTTACTGTCAGAGCGGTGCTGGCGGCGTGCTCGGAGCTGCTGGGCGCGCTGCTGGGCGACTAGGGGACGCCGCGCTAACGACTAGGGGACGCCGCGCTAACGACTAG
Protein Sequence
MRCAGEGGKIIETRLYSTRERFCDVTLYCSPSFATQVPNKDTVEPQNIRGVSLRAHRVVLAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLNYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAAACSELLGALLGAHEAHGEPVLVIDGAEPRHLRALLDYMYTGEMNVHHVSVYCQSGAGGVLGAAGRAAGRLGDAALTTRGRRAND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-