Oiva011280.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000007.1:14682604-14684988[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-11 4.1e-09 37.5 0.1 1 39 13 51 13 56 0.93
Sequence Information
- Coding Sequence
- ATGGAGCCTTCTGCTAAAAAACGGCGCGGGGAATGGACAGAAACACAGTTGAAATCCGCCCTTCAAGCAGTAAAAAGCTGCCATATGTCACAGCGAAAAGCTGCTGAAACATATGGCATACCAAGGCGAACATTAAGAAACCACATAGAATCTGGTTCCATGGAGAAGATAACTGGTCGTGTCCCTATTCTTAATAAATCACAAGAAAAGGATTTATGCAAAAGGATAATTAGACTGTCTCAGATAGGAATGCCATTAACTCCCAAAATTGTTCGGAAGCAGGCTTACGAATTTTGTAAAGCGAATAATGTACCGAATCTTTTTAGTGATAAAAAGAATATTGCTGGGAAAAAATGGCTCACAAATTTTGTGAAACGCAATCCAGAAATATCGCTTCGAAGGGCTCAATTGTTAAATCCCGCCAGAGCACAAAAACTCAACAAGCCAATAGTTTCAAAACATTTTGAAGCCCTAAAAGACATTTACGATGAGTTAAATATTTCCACCCACCCGGAACGCCTTTATAACATGGACGAAAAGGGATGTCGTCTAACACTACACCACCAACAGAAGGTTTTTGCAGCAAAAGGGACCAAGAGAGTGCACTTTGTCAGTCAAGAACATGCAGAAAATGTCACAGTCGCTATGTGTGTAAGTGCAACGGGCAACACCGTGCCACCTATGATTCTATTTAAGGGCAAAAGATTGAGACCAGAATTTTGTGACAATTTACCACCTGGTAGTTTAGTCAAAATGGCTCCAAAAGGCAGTATGACGACcgaactttttgttgatttcatACACCACTTAGGGCAGAATAAATCTCCAGGAAAATGCCTACTAATTTTTGATGGGGCCTCCTCACACTTAGACGCAAGAATCGTTGACGCTGCTGATGCCCATGATATTGTACTCTATTGCTTGCCTTCAAATACGACTCATGAGCTTCAACCGCTAGATAAAACGGTTAATAAGTCGTACGAACATTTTTGGGACGAGGAGGTTTTGTTGTATGCATATCAGCATCCAGAACGTAAACTGACTAAAGCTCGTTttacgaaaatttttacaaaagttTGGTCTAAGTGCATGACCAAGGACAATATAATCAGTGGGTTTAGAGCTACTGGCCTCTTCCCTTACGATCCCAGCGCAATTCCTGAAGAAGCGTATGCACCATCAGTACTTACACTAATGCCCGATCCACAGGTGGCAAGTTCCTCAAGAATGCCTGATTCAGTTTCTAATTCATCACCTTCAAGAGATTCTATTCCCAGAAGTCCTGTTATGTACCCAACATGCGACAAtcattttgatgaaaatttttcaaatcaggaAGAAGAAGACAGGAATTTATCAccattaattttaattcacgatGATGTATCCCCAAATCATGCAAATTACGTCGAAATCGTTGAATTTTATCCGCAATCTCCAACTTTTGTCAAAAAATTAGTTGATTATAGCTCCTCTTTTGAAGATTATAACGTGGACAACTTGGAGGATCAAGATCCGATTCAAAAGCTACCTGTTTTGGAGAAATATAATAGAAGTACAGAGTTTTGTTCACCTGTTCCTACTACCTCTGGCTTAAATAAGCAGCCTTTAATACCACGTTTAGGTTCAAGTACGTCTGATTTATCTGAAAATGAGGATTTTGATGAAGGCcttcaaaaaatgaaaaattctacaaagtgttttaatatttatacttCATCTTCTAAATCAGACGAAGAAAATTTAAATCCGAACCTCAGAAAACTTCCATCGCTCTCTGAGCCCAATAAAGTTCAACTTGATGATCCGGAAGATAATTTTCCTTTATCAGAACTGAAAAAACATGCTGAGAAATCACCATTCCACAAACAAATCCCCACTCCTAACTTCGCTACCATTAAATACAAACCAAGAAGAAAAGCGGTGAATTATATAGGCCAGAAAATAACTAAAGATTTGTTTGATACTGCTAAAGAAAAACCGGCGAAGAACACTaaaagaacaaacaaaaaaactaaaCCAAGCAGACGACCAAGTGACGATACAACTAAAAATTTGCAACCTACAAGAAACCAGAGACAGAAAGGAAAACAACCGAGTGAATCTAATAAAGGTAAAAAAGAACTAAACAAGAAAAAAGGTAATGAACTTAAAAAAGTACCCAGAGAAAGACGACTGAATGAAGATATTAATAAGAAGGTGACAAAAGCAAGTAAGAAGGAATCTAAAACACTCGAAAAACATGGTTGGTATTGTCATGGATGCAAGGTGGATAGACTTGATGATATGCGTCAATGCCAAAAATGTCAAAAATGGTATCATGAAGTCTGTGTGGGTTTAACCAAAGACGATGAGGAGCAATTCATATGTCCAGAGTGCAATTAA
- Protein Sequence
- MEPSAKKRRGEWTETQLKSALQAVKSCHMSQRKAAETYGIPRRTLRNHIESGSMEKITGRVPILNKSQEKDLCKRIIRLSQIGMPLTPKIVRKQAYEFCKANNVPNLFSDKKNIAGKKWLTNFVKRNPEISLRRAQLLNPARAQKLNKPIVSKHFEALKDIYDELNISTHPERLYNMDEKGCRLTLHHQQKVFAAKGTKRVHFVSQEHAENVTVAMCVSATGNTVPPMILFKGKRLRPEFCDNLPPGSLVKMAPKGSMTTELFVDFIHHLGQNKSPGKCLLIFDGASSHLDARIVDAADAHDIVLYCLPSNTTHELQPLDKTVNKSYEHFWDEEVLLYAYQHPERKLTKARFTKIFTKVWSKCMTKDNIISGFRATGLFPYDPSAIPEEAYAPSVLTLMPDPQVASSSRMPDSVSNSSPSRDSIPRSPVMYPTCDNHFDENFSNQEEEDRNLSPLILIHDDVSPNHANYVEIVEFYPQSPTFVKKLVDYSSSFEDYNVDNLEDQDPIQKLPVLEKYNRSTEFCSPVPTTSGLNKQPLIPRLGSSTSDLSENEDFDEGLQKMKNSTKCFNIYTSSSKSDEENLNPNLRKLPSLSEPNKVQLDDPEDNFPLSELKKHAEKSPFHKQIPTPNFATIKYKPRRKAVNYIGQKITKDLFDTAKEKPAKNTKRTNKKTKPSRRPSDDTTKNLQPTRNQRQKGKQPSESNKGKKELNKKKGNELKKVPRERRLNEDINKKVTKASKKESKTLEKHGWYCHGCKVDRLDDMRQCQKCQKWYHEVCVGLTKDDEEQFICPECN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01166530;
- 90% Identity
- iTF_00889105; iTF_00889106; iTF_00889107; iTF_00889108; iTF_00889109; iTF_00889110; iTF_01166530; iTF_01166529; iTF_01166531; iTF_01166532; iTF_01166533; iTF_01166534; iTF_01166535; iTF_01166536; iTF_01166537; iTF_00404645; iTF_00404644; iTF_00677544; iTF_00677473; iTF_00695410; iTF_00695409;
- 80% Identity
- -