Oqua021653.2
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- -
- Assembly
- GCA_949316235.1
- Location
- OX438752.1:8941810-8957991[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0041 0.39 12.2 1.0 3 23 210 231 209 231 0.96 2 22 0.42 39 5.9 0.2 1 21 610 630 610 631 0.96 3 22 0.0056 0.52 11.8 0.8 3 21 707 725 705 726 0.94 4 22 0.23 21 6.7 0.1 3 23 735 756 733 756 0.89 5 22 0.0089 0.83 11.1 0.4 3 23 776 797 774 797 0.96 6 22 0.0043 0.4 12.1 3.6 1 23 803 826 803 826 0.95 7 22 0.11 10 7.7 0.0 1 23 852 875 852 875 0.90 8 22 0.016 1.5 10.3 3.4 1 23 880 902 880 902 0.97 9 22 0.1 9.4 7.8 0.6 1 23 908 931 908 931 0.95 10 22 0.00089 0.083 14.3 1.3 1 23 944 966 944 966 0.98 11 22 0.00015 0.014 16.7 1.8 1 23 1018 1041 1018 1041 0.97 12 22 0.0011 0.1 14.0 3.3 1 23 1099 1122 1099 1122 0.96 13 22 0.00095 0.088 14.2 2.1 2 23 1148 1170 1147 1170 0.95 14 22 0.075 7 8.2 0.1 2 23 1176 1198 1175 1198 0.93 15 22 0.0083 0.77 11.2 0.2 1 21 1241 1261 1241 1262 0.95 16 22 0.0011 0.098 14.1 0.6 1 23 1272 1294 1272 1294 0.93 17 22 9.6e-05 0.0089 17.3 0.3 2 23 1381 1403 1381 1403 0.93 18 22 2.8e-07 2.7e-05 25.3 1.4 3 23 1410 1430 1409 1430 0.98 19 22 0.034 3.1 9.3 1.1 1 23 1449 1471 1449 1472 0.94 20 22 0.1 9.6 7.8 0.0 1 23 1494 1516 1494 1516 0.97 21 22 0.018 1.7 10.2 0.5 1 23 1522 1545 1522 1545 0.95 22 22 0.00045 0.042 15.2 0.6 1 23 1551 1574 1551 1574 0.95
Sequence Information
- Coding Sequence
- atgaaCGTGAAATATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTAGTGCCTATTTTTCCTACCACCAGTTCGGATGACTCGGGACCTCCCGTCCTAGCCTCGAAAATAAAGGATTGCGTGTCCGTGCAGATAAGCGAAAATGATGACCTGCCATCAAATGTCTGCAGGAAATGCATGAACAATGTAAATAACTGGCATATATTTAAGGGAATATGTGAAAGGACACAAAACAAACTACAGTCTCTAAAGGATGGCAGCCAACTAGAAGAGGTGAAAGTAAAAAGTGAACCTTTGTCTGATGAAGCCTATGAAGAGGGAGTGGTTATTGATGGTTCATATCCTGAGTCAGAGaATGCCGTCCCATCCTCAAGTAAAATACAAGCTGAAGGCCCACCAATCTTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGGGTATGGAGAGCGAAAAAGAGGAAGACGCCGATGAAGAAGCGGAAGAAGAAGAGATTAATGATACGACCCGGTCGTTCGCGAAAGTCCCCAACATGCCCGAAGTGTCAATTACCGTGATGCGTCCCACTGGTGAGACCCTCCAGTCACGTCAAGGTATCCAGCAGTTGGCGTCCAAGGATTGCCTCGTATGCGGCCGTTCATACAGATACTCGCATAACGCTAGGCGACATGAACTCACTGCTCATAGTTTCGAcagatatacaaataaaataatgcacaAAAAACCACATACTCACATGCAACCAAAACTCAGACCCAACCCATTCAATCCTAAAGCACGGCTCATGCCTAACCCGATAAGTCACAAGATGCAATTAATTCCTAAGAGTATGTCATCTAAAGTTGCAATGCCGCAAAAGGTAGTGGCTTCACCGAAACCTATACCAATAAAACCGTCGAAGACGCCACATAACAATTTACCGTACCCTCTTCGCATTAAAGCTCTAAAGGACTTGCAAATAAGAAAGAAGGAGCCACAAATTTTGAAGACCCTTCTTACTTCGAAACCTGAAGTCCTGGTATCTGAACCGGAAATCATGAATTCTGCCCCCGAAAGTCCTGAAACATTAATATCCGAACCGGAAATTGCATCATTCCAAGTAGAAACCATTTTATCAGAACCTGAAGGCTATGATCAACAGAATGACGAAATGGATGGGGAAGTGCATAACGATCAAAGTCAAAACTATGATACTGTTGACATGGAATCTGACAATGAGATAGAGATCGCGCGACAGAAAGAGATCGAATCAGAAAGCAAAGACAATCATGAACATGACACAGAAGAAAACATTCTTCCTGATATAGTCGACAATATCAGCAACGAAAATGAAGAGAAGGAACACATTGACGAACTAAACgaagaaaatgataaaattgatGAGAATCCTGATGTTGAGGAAAAAGACGATGAAGAAACTATGGAGGAAGGAGATAATCCAGAACAAGATGATCATTTGGAAGAGGCAAATCACGATGAAAATGATGAGGATGATGAAGATGAGCTCCCTCTAATGCCAATAGCTCccgttgttgaaataaatgagcTGCAAGCCAATTCgtacaataatgaaaataacGAAGAAGAGGAGCTAGATGAAACAGCCGAAGCTAATGATAGTGTGGATACTGAAGAGACTGCTAAGGAACTAGACCCTGACAAATTGTATGTTACAAAGACTCAGAGGGACTTTATTGCTAAGTATCGTGATGTTATCGAGCAGATCAATACTAAGCGCTGTCTTTGCTGCGATCGAGAACATCCTCGTAGGAAAGCAGTTATTCAACATTTACAGAAAAATGGTCATAAAGTTCCGAAGCATACATGTTACAATTGCGTGGTTACCTTCGGACATATTGGCGCTTTACTCAGTCACATGAGAGCTAACACTTGTACTGATTTAtggaaaattatttacaatgagAATGGTATAACCGATGATTTGGTTCTCGAAGATGAGCCCAAAGATTCCAAAGTTCAGTACAAAGACATTTTCAATGCTAGATCTTATGCTTGTAAATTGTGTCCAGCTAAATATCAGCTGAAACAGTTTATAATGAAGCATGTTTTGGATGTTCACGAAGATGGTCAATCTAGAGTGACACTCGCTTGTGTCCACTGCAGGGCCAGATTTAAGGACAAATCTATGTGGAAGAAACACATTCGTAATGGGGAATGTACCGTCTACATCGCTTGTGACCTATGTTCAGAAAAATTTAAGAACATGCAGGATTTTAATGATCATGCTTTAGCTGTTCATGCGGGTAGCTTCGATCAAGACAGTCAGAGTAAATGTGTCGACGGCAGAAGGACCGATTGCCCTATATGCGGTAAGAATAACAGTAACTATCCGCATTTGGTGAagcatttaaaaattatacacaaTGAAGAGAGACCTCATTATTGCCGCCATTGCGACTCCAAATTTGAACAATCTGCTgacttaaataaacatatttacatGGAGCATTCCGACAAAGCCATGGGTGACCAAAGTTCTGAAGTGGATATGTCACTTGTGAAAGAAGAGGCTGAAGAGTATCATTACTCTTGTACAGAGTGCAATGCCATATTTGAAACCGTGGACGCATGGACTGACCATCAAGTGGCTGAACATAACCAGGTAGCCCATCATTGTGATCAATGTGAGAAAAAGTTCCTGAGACCGTCCGAACTTGCAGAGCACAAAAATACTCACTTACGAGTTAAATTCTATCCTTGCAGTGTCTGTGCTAACTCATATAGCACCCCTCAGAAACTTTCGGAACATGTTCAACATTCGCACCCTGGAGTAGGTTCGAACACTTCAGCTGATTCTGAGTTTTATTGCGACATATGTATCAGATCTTTCAAGAGTCGCCAGGCATACTCCAATCACATGCGTATACATGCTAAAGTACCAACTACAAATAGAAAGCCAGGAGATCCGAAGGGATTTGCTCCACAAATTGTTGGAAAACCTATTAAACAGTACAATGTGTCCCAAAACATGCCTCAACAAGGTTTCGTTTTCAAACCAAACTGTAATGTCCCAAACGCTCCTTACTCGTGTGATATTTGTGGCAAAGGATTTATGCACAAGAAAAACATTTGGAAACACAAGAAGGTCCTACATGCTGACCTGCTAAATGATAGAAATGATAGCGAGGAAAATACCATGCATGCATCTACGGAAGAAGACGAGTATAACGTTGACGAGAATGGCACTACGCTATCGACGCCACAGTTCAATAGTTTCAACTTTACTAACTTTTCGAATAATGTGCAACAAAATCAAGCTGAGGTATACACCTGTGATCTTTGCTACCAGCGATTCTCATTCAGAGACAGCTTGAGAAAACACAAACGTGCTAAACATGGAATTATAAATGCCAATACTAGTAGCAGCTCTGAAACTCAGCCGCATACCACGACGAGTGATGGTAGTAGATCTAGTTGTACCATCTGCAAAATAACTTTCTCGGACAAAAAATCTTACTATCGCCACAGAAAGAACGTTCACAAATCTAGCGTACAAATGTGTAAAATATGCGGTAAACCTTTGAACTCTACATTGGAGCTGTATGAACATTTGAAAGCTGCTCATGCACGCGAGTTACTTGGATATAACGCTAATCAAGGTTCCAGTAAACAAGAAATGGCGCAGGACATGGAACTGGATTATGAGGGCGATCAAGATTCCATTGACCCCAGCGTTGATTATCAAGCGCGATACCCATGTGACACGTGTGGTAAGCAATTCGTCGGTCTATTGGCCCTACAGAATCATCAGTGCGTAACACAGCTTTCATCACAGCCACAAACGTTTGATTGTGAGATTTGTCACAAAAGTTACACTTCTATCGCTGCGCTAAAGAGCCATCGTGGCTGGCATTTGCGTTCGCCGGATGGAAAAGCGGCTGCTAACAATACCGGCCTATGGATGCCACAGCACAAAGTGACGAGTAAGGTTAGTAAACATGAAGTGGTCGATCCAGTTCAACTCGCCCGAGTTCAACATACAACTCCGCCAGCCGTCGTAGCTAAGAGAAGACTTCCTCCAGAAGTTGAAGTCACAGTTGTTAATCCGAATAAAAAGTTGCGCTCTGATGACTCGGTCGAGATGGATCAACAGTCTGGTGTGGAAGACAGATATTGTACGATTTGTGACAAGGAGTTTACTAAGCGGGCTGCGTACCAGCGCCATATGGACGAGGTTCACCAGCCGAACTCTGTGTTTTGTCCAGTCTGCGACAAGAGTTTCACAAGGAAGTCTACCCTGCTTGTTCATATGAAGAAGCACTACGAAGGCGGTGAAGGTAGTTCATCTGCTACCGGCCAAATGGATGATGAAATGCATTCTTGCGACTTATGTGGTGCTCAATACGACAACGAGCAGGCTTTGAGAGCTCATCGCGTAAGGCATCACGGGGAGGAGTCGGATCATGActctgatgatgatggttccGTCAATGTTGCCCAGCCAGGGGAGTTCACTTGCGGCCAGTGTGGGGATGGTGTGGCCACACCCCGCGACTTGATCGCACATCGCACAATGCACGCTACTCCTACCAAGTACTTCTGTAACATTTGCAAAGTTTACTTCGCGAGAGCTCTAGACCTGTCTTCCCATACTAGAGCAAGACACGCAGAGAGTAACATGTATCCTTGTGCTATGTGTGATCGGTTCTACATGAATAAGAAGAGTTTACAACGGCACATCGAGTTGTCACATTAA
- Protein Sequence
- MNVKYDRVCRLCLSSRGELVPIFPTTSSDDSGPPVLASKIKDCVSVQISENDDLPSNVCRKCMNNVNNWHIFKGICERTQNKLQSLKDGSQLEEVKVKSEPLSDEAYEEGVVIDGSYPESENAVPSSSKIQAEGPPILASLGLTPRSDKGMESEKEEDADEEAEEEEINDTTRSFAKVPNMPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKIMHKKPHTHMQPKLRPNPFNPKARLMPNPISHKMQLIPKSMSSKVAMPQKVVASPKPIPIKPSKTPHNNLPYPLRIKALKDLQIRKKEPQILKTLLTSKPEVLVSEPEIMNSAPESPETLISEPEIASFQVETILSEPEGYDQQNDEMDGEVHNDQSQNYDTVDMESDNEIEIARQKEIESESKDNHEHDTEENILPDIVDNISNENEEKEHIDELNEENDKIDENPDVEEKDDEETMEEGDNPEQDDHLEEANHDENDEDDEDELPLMPIAPVVEINELQANSYNNENNEEEELDETAEANDSVDTEETAKELDPDKLYVTKTQRDFIAKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANTCTDLWKIIYNENGITDDLVLEDEPKDSKVQYKDIFNARSYACKLCPAKYQLKQFIMKHVLDVHEDGQSRVTLACVHCRARFKDKSMWKKHIRNGECTVYIACDLCSEKFKNMQDFNDHALAVHAGSFDQDSQSKCVDGRRTDCPICGKNNSNYPHLVKHLKIIHNEERPHYCRHCDSKFEQSADLNKHIYMEHSDKAMGDQSSEVDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQHSHPGVGSNTSADSEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIVGKPIKQYNVSQNMPQQGFVFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDEYNVDENGTTLSTPQFNSFNFTNFSNNVQQNQAEVYTCDLCYQRFSFRDSLRKHKRAKHGIINANTSSSSETQPHTTTSDGSRSSCTICKITFSDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKQEMAQDMELDYEGDQDSIDPSVDYQARYPCDTCGKQFVGLLALQNHQCVTQLSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPVQLARVQHTTPPAVVAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQQSGVEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSATGQMDDEMHSCDLCGAQYDNEQALRAHRVRHHGEESDHDSDDDGSVNVAQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKYFCNICKVYFARALDLSSHTRARHAESNMYPCAMCDRFYMNKKSLQRHIELSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00027074;
- 90% Identity
- -
- 80% Identity
- -