Oqua008781.1
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- sip1
- Assembly
- GCA_949316235.1
- Location
- OX438744.1:36664168-36680543[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.3e-30 2.2e-26 94.0 0.1 6 170 372 519 367 526 0.93 2 5 3.5e-06 0.06 13.9 0.1 136 170 597 626 595 633 0.89 3 5 3.5e-06 0.06 13.9 0.1 136 170 704 733 702 740 0.89 4 5 3.5e-06 0.06 13.9 0.1 136 170 811 840 809 847 0.89 5 5 1.5e-29 2.6e-25 90.5 2.7 136 275 918 1053 916 1053 0.95
Sequence Information
- Coding Sequence
- ATGTCTGATGATGAAGTTATACGGTTCGAAATAACCGACCACGATTTGGACAATGAATTCAATACGACTAGAAATCGTAAATCGAAGAAAGAATATGAAATATATGGTGTATGGGCTAAAGACAGTGATGAGGACGACAATGAGGATAACATCAGGCAGAGAGCCCGGAAACCCAAAGATTTCTCAGCACCCATCGGTTTTGTTGCCGGTGGTGTCCAGCAGGCAGGAAAGAAGAAAGAAGCTAAGAAAGAAATCGAGGCATCTGTACCATCAACTTCACATCAACCGATGGCAGTGGACAGTTCAGATGAAGAGGAACAACCTACTATGCCCGATCCACGGGAGACAGCTGGCATCAGGAGGCAGGGAATGGGCATGCGGCCAGTCAACCTTGGCGGTAATGTAGGCGCTTGGGAGAAACACACCAAAGGCATTGGAGCTAAATTGCTGCTTAAGATGGGTTACCAACCAGGCATGGGTCTTGGCAAAGACCTGCAAGGTATATCAGCACCAGTCGAAGCCACTGTGAGGAAAGGAAGAGGCGCAATAGGTGCCTATGGACCAGAAAAAGCTGCTCTAAAGGCCAAGAGAGAGGAAGAACGCCGGCTTAAAGAGAAGGAGGAACAAGATAAGGATGCGACGGAGAAGACTTACAACTGGAAAAAGTCACACAAAGGCCGCTACTTCTACAGAGATTCGGCAGATGTCATACAAGAGGGTAAACCCACCATTCATACTATTGCCAGCAGCGAGCTGTCTCGCGTGCCCGTGATCGACATGACGGGCAAGCAGAAGCGCGTGCTGAGCGGGTACCACGCGCTGCGGGCGGCCGCGCCCCGCTTCGAGCACGAGCCGCGGCGGAACTGCCAGAACTTCGCCGCGCCGCAGCTCGTGCGCAACCTCGACACTATGGTCGAGTGCTGTGAGCAGGACATAATCCAGAACGCCCGCGAACTCCACACCGCGGAGGACGAGATAGTGGTCCTGGACCGAGAGCTTGAGGAGTGTGATAAAACGCTACTGGAACACGACGTGGTCATCGCCAAGGTCCAGGGCATCCTCGAGAGGGTTGAGGAGCTGAATAAGCCTGATGTGTCGCTGGAGATGGCTTATGAGGTGTTGTCGGAACTAAAGGAATCATATCTGTATGAATATGAAATGTTTGGCCTTGGCACGATAGCGGGCAACATCGTGAGCCCACTGCTGAGCGCCCTCATGGCAGCTTGGGACCCTCTCCAGAATCCAGAGGAACCGATCCCCACGTTCCTGAAATGGAAAAATCTCCTCGCCGAGGAGTCTTACAACAGTTTGCTATGGCAACACTACGTGCCGAGTCTCACCACCGCTGCTGAGGTGTGGAACCCTCGCGTGCCGGGCCCCATGCTGGCGGCGCTGGGGGCGTGGGGCTCGAGCGGGGCGTGTCCCCCGTGGGTGGCGGGGCTGTGCGCCGCCCGCTGCGTGGCCCCGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCTTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCTTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCTTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTCAGTACCGTCACACATGCGCCTGCTGGCCGCCGTGCGGGGCTGGGACCCCACCGGGGACACACAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTGGCCGGTGATGCGCTCGCCACCTCCGTGTACCCGCTGATCCGGTCGCGGCTGGCGACGGCGCTGACCGCGTGGCACCCGGCGGACAACTCCGCTCGTCCCCTCCTGGCCGCGTGGAAGGAGCCGTGGGGCTCCGCGCTCACCGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGAGCACTGCCTCCAGACCGCCCCGCTGGAGCTCGTCGGGAGGGAGAATACGGCGTGGCTGTGGTGTGTGGACTGGTTGGAGTTGCTGGGCGCGCCCACTGTGGCCGCCATCGCCTCGCGCGCGCTGCTGCCGCGCTGGCTGGCCGCGCTGGCTGCCTGGCTCAACACCTGTCCCACGCACGCCACCGTCATCAACTCCTACACAGAGTTCAAGAGAATGTTTCCCGATGAGGTGCTAAAGGAGCCGGCAGTCCGCGACGCGTTCAGGAAAGCCCTGGACATGATGAACCGGAGCGCCGACATAGAGTCGGTGGAGCCTCCACCCCCGCCTCGGTTCAACATCGCCGACACCAAGGAACCTTCCAGAATAGCTGAAATAATCGCGTCCACAGCACAGCATAAGAGCTTCTCGGAACTGCTAGAGTCGAAGTGCATAGAGAAGGGTATCACGTTCGTCCCCTTGGCCGGCAAAACTAGGGAGGGCAGACCGCTGTACAAGATAGGCAATATGCAGTGCTACGTTATAAGGAATGTGATAATGGTGTCCAGCGACAGTGGTAGAACGTTCATGCCGATTGGTTTGGATAGGTTATTGAATATAGTTGAAGATTGA
- Protein Sequence
- MSDDEVIRFEITDHDLDNEFNTTRNRKSKKEYEIYGVWAKDSDEDDNEDNIRQRARKPKDFSAPIGFVAGGVQQAGKKKEAKKEIEASVPSTSHQPMAVDSSDEEEQPTMPDPRETAGIRRQGMGMRPVNLGGNVGAWEKHTKGIGAKLLLKMGYQPGMGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAALKAKREEERRLKEKEEQDKDATEKTYNWKKSHKGRYFYRDSADVIQEGKPTIHTIASSELSRVPVIDMTGKQKRVLSGYHALRAAAPRFEHEPRRNCQNFAAPQLVRNLDTMVECCEQDIIQNARELHTAEDEIVVLDRELEECDKTLLEHDVVIAKVQGILERVEELNKPDVSLEMAYEVLSELKESYLYEYEMFGLGTIAGNIVSPLLSALMAAWDPLQNPEEPIPTFLKWKNLLAEESYNSLLWQHYVPSLTTAAEVWNPRVPGPMLAALGAWGSSGACPPWVAGLCAARCVAPRLLAAVRGWDPTGDTQPLHHWVLPWHQLAGQYRHTCACWPPCGAGTPPGTHSRCTTGCCPGTSWPVSTVTHAPAGRRAGLGPHRGHTAAAPLGAALAPAGRSVPSHMRLLAAVRGWDPTGDTQPLHHWVLPWHQLAGQYRHTCACWPPCGAGTPPGTHSRCTTGCCPGTSWPVSTVTHAPAGRRAGLGPHRGHTAAAPLGAALAPAGRSVPSHMRLLAAVRGWDPTGDTQPLHHWVLPWHQLAGQYRHTCACWPPCGAGTPPGTHSRCTTGCCPGTSWPVSTVTHAPAGRRAGLGPHRGHTAAAPLGAALAPAGRSVPSHMRLLAAVRGWDPTGDTQPLHHWVLPWHQLAGQYRHTCACWPPCGAGTPPGTHSRCTTGCCPGTSWPVSTVTHAPAGRRAGLGPHRGHTAAAPLGAALAPAGRSVPSHMRLLAAVRGWDPTGDTQPLHHWVLPWHQLAGDALATSVYPLIRSRLATALTAWHPADNSARPLLAAWKEPWGSALTAMLHQHIVPKLEHCLQTAPLELVGRENTAWLWCVDWLELLGAPTVAAIASRALLPRWLAALAAWLNTCPTHATVINSYTEFKRMFPDEVLKEPAVRDAFRKALDMMNRSADIESVEPPPPPRFNIADTKEPSRIAEIIASTAQHKSFSELLESKCIEKGITFVPLAGKTREGRPLYKIGNMQCYVIRNVIMVSSDSGRTFMPIGLDRLLNIVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -