Oqua001473.1
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- Rel_1
- Assembly
- GCA_949316235.1
- Location
- OX438741.1:23907205-23922592[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-29 1.9e-25 90.7 0.0 2 160 45 201 44 210 0.84 2 2 0.4 3.5e+03 -1.3 0.1 20 40 347 367 342 368 0.83
Sequence Information
- Coding Sequence
- ATGTACTCCTACGATACGGGGAGCAGTGATGACTCCTGCAGCTTATCTTCACCACAGTCGCAAGGCGTTTGCTCACCGTTGCAGCGAGTTCCGCACTTAAGCTCGCCGCCGAATAATACCGGACCATTTTTATGGATAAGTGAGCCACCAAAACAACAGTTCAGATTCAGGTATAGCAGTGAAAGGACTGATGGCACACATGGCTGTTTACCTGGGTGCAATAGCTCTTCTGATTTAAGAACCTATCCAAGTGTGAAACTGTTGAACTACTATGGCAGAGCTTTTATAAAGTGCCAGTTGTTTCAAATAGAAAGGGAGACTGTGCATCCTCATGAATTGCTTGGAAATAAAGCAATAGACAATAATGACATTGTGGTGCCAGAGGATGGAAGCTATGCAGTCTGTTTTCCGAGATTGAACATAATACACCGGGATAAGGAACAAGTTTTAAACTTCTTCATAAATCTTTTGCAGAGTTCTGGGAATTTAAACGCAACTGAGATTAACAAACAAAGCAAGGTTTTGAGAAAACAGTGCAACCTGAATAAAGTGCGGTTGCGGTTTAGTGCTCACGACATCAACACCAATGCGGAGATTTGTCACGTGTACTCGTGGAGTATTAACAATATGAAGAGCGTCACTAGTAACGAACTGAAGATACATTGGGCGAGTTTAACCTATGGTCGGCCTAGAGGCGGTCAAGACCTGTGTCTCCTTACAAGCAAAGTCAGCAAAAAAAATATCAAAGTTCAGTTTTACGAGGTGGATGAATATGAAAGAAAGATCCCTGGGTCGGAGAGATATGCATCTTTTGGTGAAAGAAATGTACATCATCAATATGCTATTTTGTGCGTTACGCCAGCATTCCGCGACCATCACATCACTTCAAACGTCGAGGTTTGCATAGTATTGTATCGACCAACCGACGAAGCCACAAGCGAGCCCCACAAATTCATATACAAAGCCGAGGCTGTCGACATACAAGCCAAGAGGAGGAAGCGTGATCTTTCAAGTTCGACAAGTACGTATAATGACGGTGGAACATTTACCGGCAGTGTCATGGGTACTTCAACAGTGACGTCAACTCAATATTTCCCCGAAAAGCCGCCACCTTTGCAATATTTTACTAACGAagaaatggcagaatattgtgcaccGCATTTTACTGAAAATCAAGTAACTGACACAATAGGAAATTCTCAAAGTGCCATACCGCAAATTACTCAACCTGTTGGTATATCGAATCCAGGCTCTAGTTCGTATTATGCGTCACAAGGATCACAATACACTCAATCTCCAAATAGCCAAGAGCAAACGATTTTCGACTCAAACCAAGCGCAATTAATTGGAATGATCAACTCTCAAGAACATTTAGAACAAATTCTCCCGTCACTCAACACACCTCCAGTAATACAGGTAGCACTTCAAATTCATAAGTTCAGctaa
- Protein Sequence
- MYSYDTGSSDDSCSLSSPQSQGVCSPLQRVPHLSSPPNNTGPFLWISEPPKQQFRFRYSSERTDGTHGCLPGCNSSSDLRTYPSVKLLNYYGRAFIKCQLFQIERETVHPHELLGNKAIDNNDIVVPEDGSYAVCFPRLNIIHRDKEQVLNFFINLLQSSGNLNATEINKQSKVLRKQCNLNKVRLRFSAHDINTNAEICHVYSWSINNMKSVTSNELKIHWASLTYGRPRGGQDLCLLTSKVSKKNIKVQFYEVDEYERKIPGSERYASFGERNVHHQYAILCVTPAFRDHHITSNVEVCIVLYRPTDEATSEPHKFIYKAEAVDIQAKRRKRDLSSSTSTYNDGGTFTGSVMGTSTVTSTQYFPEKPPPLQYFTNEEMAEYCAPHFTENQVTDTIGNSQSAIPQITQPVGISNPGSSSYYASQGSQYTQSPNSQEQTIFDSNQAQLIGMINSQEHLEQILPSLNTPPVIQVALQIHKFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -