Ospi006747.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- bab1
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000045.1:1491723-1493962[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-15 6e-12 44.8 0.1 4 45 357 398 354 398 0.92 2 2 7 6.5e+03 -3.3 0.0 29 45 447 464 444 464 0.76
Sequence Information
- Coding Sequence
- ATGGCGAGCGCGTCGCAGCAGTATTGTCTACGTTGGAACAACCACCGATCGAACCTGCTGACCGTCTTCGAGGAACTCCTACAAAACGAGGCGTTCACCGACGTCACCTTGGCGGTGGACGGCGGTGCCTCGGTGAAGTGCCACAAAATGGTCTTGGCTGCCTGCTCCTCGTACTTTCAGACCCTCTTCATCGACCTACCGTGCAAACATCCGATCGTCGTGCTGAAGGACGTGAAATACTGCGAGATCAAGGCGATTTTAGAGTACATGTACCGTGGCGAAGTGAACGTAGCCCAGGAACAGCTCGGTGGCTTGCTCAAGGTCGCCGAGGTCCTGAAGGTCAAGGGTCTCGTCGAGGAGAACGgctcctcgtcgtcatcgcaGGAGCGACGAAGCGAGGAGATCGAGACTTCGATGTCACCGCCACCGGCGATCACCACCAGCACGACCAATAGCGCCGCGCACAGCAGCGGCCACGTATCGCCGCCTCATTCCACCGGAAGTTCTTATAATCCTTacgGTAAATCCACGGTTCCGATCGATAGAGTGAGTCAAGGCCGCATATCCTTGCCCATGTGGGCCCTGTCAGGACTTCCGCTTCCTCAGCACCCCCCTTCCGGTCATCAGGCTTCCTCTCAATCTCATTCTCAACACTCGGTCGTAGGTGCTTCCTACGACAATGGCTTCGAAACTTCACCGATTAATCCGAAACGCAAGAAGTACGCCTCGAATTTGTTAATGAATCGGGACACACCAATTTTGCGAACGGTCTTGGGTCAGGGTCATGCCGATAGCTCTCAGAACATGACGCTCTTGCCGCCGGACAGTCACGAAAGCAACTTCCGTACGAGTACCAATGGTTCTTCGAACGAAAGTGGTAGACGCGATAGCACCGATTTACCTAACAACACGGAACCGGTGCATAGTCCTTACACCGATGTTTCAATGATCGATGAAGAGGAGAAGCAGCCGTCCCCGCAATCTTACGTCGATACCAAGCcagGTGTGGTCAATTACATGGCAACGCAAAAGCCGGAATGGAAACGCTACAAACAATACACGCGGCACGACATAATGTCGGCGATCGAGGCGGTGAGATCAGGCATGAGCGCGTTACAGGCCGCACGAAAATACGGAGTCCCCTCGCGGACGCTCTACGACAAGGTAAAAAAACTCGGTATCACGACCTCTCGACCCTTCAAACGCGGTTCGAATGGCGCCGGAGGAGCATGCTTTCCCTATGGGATCGGCGGTAACGCGAACGGCAACATTTACGCGATGAACAGCGGCGCCCTCTccgagagcgagaacgagaacagCAATGCCCTTTACGAGAACCCTTCCACCATTTTGGAAACGAATTACGTGAAAAGAGACGTCTCGGCCGAACGGGAAGCCAACATGGAGTCCGGCCGATGTAGTCCAACTTCCGCGCTCCATCCGGGcaaacagcaacagcagcagcaacaacaacaacagagGAACGAGGATCAGGTAGAGGATCTTTCGGTGAACCGTAAGCCGGACGTACGGGTGATAATGACGCCAACGTCGGTCATcaaggaggaagacgacgcTTCCGATAACGGCAATCGTAACTGA
- Protein Sequence
- MASASQQYCLRWNNHRSNLLTVFEELLQNEAFTDVTLAVDGGASVKCHKMVLAACSSYFQTLFIDLPCKHPIVVLKDVKYCEIKAILEYMYRGEVNVAQEQLGGLLKVAEVLKVKGLVEENGSSSSSQERRSEEIETSMSPPPAITTSTTNSAAHSSGHVSPPHSTGSSYNPYGKSTVPIDRVSQGRISLPMWALSGLPLPQHPPSGHQASSQSHSQHSVVGASYDNGFETSPINPKRKKYASNLLMNRDTPILRTVLGQGHADSSQNMTLLPPDSHESNFRTSTNGSSNESGRRDSTDLPNNTEPVHSPYTDVSMIDEEEKQPSPQSYVDTKPGVVNYMATQKPEWKRYKQYTRHDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGAGGACFPYGIGGNANGNIYAMNSGALSESENENSNALYENPSTILETNYVKRDVSAEREANMESGRCSPTSALHPGKQQQQQQQQQQRNEDQVEDLSVNRKPDVRVIMTPTSVIKEEDDASDNGNRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513393;
- 90% Identity
- iTF_01090079;
- 80% Identity
- iTF_01090079;