Basic Information

Insect: Odynerus spinipes
Gene Symbol: bab1
Assembly: GCA_032403825.1
Location: JAIFRP010000023.1:75959-98182[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.2e-12 1.1e-09 37.6 0.0 1 39 391 430 391 434 0.90

2 4 3.6e-12 3.3e-09 36.0 0.1 2 39 446 483 445 486 0.94

3 4 1.3e-18 1.2e-15 56.6 0.0 2 45 501 545 500 545 0.97

4 4 1.5e-18 1.4e-15 56.5 0.1 1 42 552 594 552 595 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.2e-12	1.1e-09	37.6	0.0	1	39	391	430	391	434	0.90
2	4	3.6e-12	3.3e-09	36.0	0.1	2	39	446	483	445	486	0.94
3	4	1.3e-18	1.2e-15	56.6	0.0	2	45	501	545	500	545	0.97
4	4	1.5e-18	1.4e-15	56.5	0.1	1	42	552	594	552	595	0.97

Sequence Information

Coding Sequence: ATGGAGACAGATCGTTATTGGGGCGTACACTACAGCGGCGGCATGGCTGGGCAGCACTACTGCCTACGTTGGAACAACTACCAATCCAACATGACATCCGTTTTCCATCAACTCCTGCAAAACGAGGCCTTCGTCGACGTCACCCTGGCATGCAACGAGGCCTCGTTGAAGGCGCACAAGGTGGTCCTATCGGCCTGCAGTTCCTACTTCCAGAAGCTCTTGCTTTCGAATCCGTGCAAACATCCGACGATCATCATGCCGCAGGACGTTTGCTTCAACGACCTCAAATTCATCATAGAATTCGTCTACAGAGGCGAGATCGATGTGTCACAGGCCGAACTTCAGTCGCTCTTGAAGACGGCCGACCAACTGAAGATCAAGGGCCTCTGCGAGGTACCTGAGAGCAAGGACGGCCCACCATCCGTAAGCTTGAGCTCACCACCGAGAGAGCCAGGTACGCCGAGGTTAAACTTCACCAGGCTGAAAAGACATCATCCGAGATACAAGAGAGCAAGAACAACGTTTGAGCCTCGTGCCACCGATTCCAGGCACTACGATAGatacaaagaggaagagactAACGAAAGTTACGCTCGTAATAGTAAAGAGAACCACAGAGATTGGCAGGCCGAAGATGAAGAGTGCACGGAGGtggcagcggcagcagcagcagtagttcTGGACAGCTGCCAAcgtaacaacaacaacagcagcaacggtAACGGTacaaacaacaacaacaataacgGTGACATGTTCTGTCACACAGGGCTAGGTCATTACGGTCATCACCCAGATCCTGGTGAGGTAGATTTGCCTCCTGAAACACAGCCCACACCACCGAGCGCCACTTTGGTCGGTACCACCATCACCCATCTACGAGATCCTGATCATCACACTGAGATACAAAATTGCGACAGCGTGAAGATAAAGTTCGAAACTCTCCACACGATGGATTCCTCCGACACGATCGACATCGACAGCCACATGTCGGACAGGGCGAGCGTGAGCTCGAAGAACGCAGCGGACAGCGACAACATGATGATGATCACTCCTGAACTTTTGGGACTTATGCCGTCTGGGAGTTCGATCCATTCGGATTCCGGCGAGAACAATTCGAGAGGACACTCCGGGCAGTCCAGTTCGCATCATCACAGTACCAAATCTTGGACTCAAGAGGACATGGACGCCGCACTGGAAGCATTAAGGAATCACGATATGAGCCTTACAAAAGCATCGGCTACTTTCGGGATCCCATCGACGACGCTCTGGCAACGAGCTCATCGCCTAGGTATCGACACTCCGAAAAAGGACGGTCCCACGAAATCCTGGAGCGACGAGAGCTTGAACAATGCGTTGGAAGCTCTCCGAACGGGAACTATCTCGGCGAACAAAGCCTCGAAAGCGTTCGGTATACCTTCCAGTACTCTCTACAAAATCGCAAGAAGAGAGGGTATTAGATTAGCCGCGCCTTTCAACGCTAGTCCGACTACGTGGTCACCTGCTGATCTGGATCGTGCTCTGGAAGCGATAAGGTCCGGTCAGACGTCCGTACAGAGAGCCTCTACGGAGTTTGGTATTCCTACGGGAACTCTATACGGTAGGTGTAAGAGGGAAGGGATCGAGCTAAGTAGAAGTAATCCCACGCCGTGGAGCGAAGATGCCATGACCGAAGCTCTCGAAGCCGTCAGGCTGGGTCACATGAGCATTAATCAAGCGGCTATCCATTACAACTTACCCTACTCTTCCTTATACGGCCGTTTTAAAAGAGGCAAGTACGAAGAACCGGTAGTCGGTGACTTATCGCAGGACGGCACCAATCCGCATTTTCATCAAAGTCCGACGCAGAACCACTCGTCCACGCTTCCCGATCAAATGTCGTATCAGGGCAGCTGA
Protein Sequence: METDRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESKDGPPSVSLSSPPREPGTPRLNFTRLKRHHPRYKRARTTFEPRATDSRHYDRYKEEETNESYARNSKENHRDWQAEDEECTEVAAAAAAVVLDSCQRNNNNSSNGNGTNNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSIHSDSGENNSRGHSGQSSSHHHSTKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDLSQDGTNPHFHQSPTQNHSSTLPDQMSYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00391429;
80% Identity: iTF_01090081;