Ospi007960.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- retn
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000084.1:402312-411801[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-20 5.1e-17 61.8 0.0 13 89 13 87 5 87 0.91
Sequence Information
- Coding Sequence
- ATGTATAGGGAAACAGAGTTTCATGAAACTGATCAACATAGAGTCGTAGGAACGCCAATCAATCGGTTACCGATCATGGCGAAATCGGTGTTGGATCTTTACGAACTGTACAACCTGGTGATCGCTCGAGGCGGCCTGGTCGACGTAATAAACAAGAAGCTCTGGCAGGAAATCATCAAAGGTCTCCACCTGCCGTCGAGCATCACTTCCGCTGCGTTCACTCTGCGCACCCAgTACATGAAATATCTTTATCCATACGAATGCGAAAAAAGGCGATTGTCCACACCAGCGGAACTCCAAGCAGCGATCGACGGCAATCGTCGAGAGGGTCGAAGAAGCAGTTACGGGGCATACGCGGGTGGAGGTGCCGGAGGGGAGAGTTTAGTGCAAAGGAACCCGCATACACCGAACTCGTTGGCGTTGCGAGCTCAAATGTCACCGTTGTCTTTGGTAACAGCAGTGGCGGGTCATCATGGCGCGGCACAATCCTTAGTGAACGGAAGCGCGGCACACACACCCCTACCTCATCATCCGCATCATCCGCAGCATCCTCAAGGACCACTAGGTCAGCCACCGAATGCCGGACCAATACCGGGCTTAGCACCATCCGAGTTCGAGGCACGAATGGTCGAATATGTGAAACTTCTGAACAAGGAGTTGAGAAGTGCGGGAGCTGGTACACCGCCACCGATGATCAACAGACAAGGTAGCGCATCGCCACCATCGTCCACACCACCGAGAGACGGTGCTTTCAGCGCCCTCGAAATGTCACGACTCACCCTCTGGaacatgtataataataacaccCTTTATCCGGGCGTCGGACACCAGCCACCACTTTCGCCACAGGCCTCGCACTCGCCACTGCCACCTGCATCCAGCCCGGAACCTCAAAGGGAAGCATTGGACCTTGGACTTAGGTCCTCGCCCATGTCTTCCTCACCACCAAGGCAAAGTCCTCAATCCTCTGGCAGTAGCCTTCAAGTAAAGAGGGATCTGGACTTAGCCGGCACACCGGGGCCACCAGCTGCCAAGAGACTACTTTGCGAAGACGATAGTCCTCCGGAAAAGAATGCATCGCTTTCGGCGAGCACGCACATTAAAATCTGCAATCGAGGAGACGGAAAGAATGGTGACAATTCCCTCGTGGTCAGCGTAGAACTAAACGGTGTCATCTACCAAGGCGTCCTTTTCGCACAGACCGACGCCAGAAATGCGTCGACGACTACGACCGCCAACGAGACAACAAAAACACCGCGGAGCATCGTCTCGTGA
- Protein Sequence
- MYRETEFHETDQHRVVGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGAGGESLVQRNPHTPNSLALRAQMSPLSLVTAVAGHHGAAQSLVNGSAAHTPLPHHPHHPQHPQGPLGQPPNAGPIPGLAPSEFEARMVEYVKLLNKELRSAGAGTPPPMINRQGSASPPSSTPPRDGAFSALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQASHSPLPPASSPEPQREALDLGLRSSPMSSSPPRQSPQSSGSSLQVKRDLDLAGTPGPPAAKRLLCEDDSPPEKNASLSASTHIKICNRGDGKNGDNSLVVSVELNGVIYQGVLFAQTDARNASTTTTANETTKTPRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- -
- 80% Identity
- -