Oorn067958.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- hang
- Assembly
- GCA_963969285.1
- Location
- OZ017739.1:386441031-386462328[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.062 26 8.6 3.2 2 23 243 265 242 265 0.95 2 21 0.13 56 7.6 1.6 2 22 352 372 351 372 0.93 3 21 0.36 1.5e+02 6.2 1.3 3 21 382 400 381 401 0.95 4 21 0.011 4.6 11.0 1.3 1 22 441 462 441 464 0.90 5 21 0.044 18 9.1 1.9 2 23 503 525 502 525 0.90 6 21 0.00034 0.14 15.7 1.5 1 23 565 588 565 588 0.93 7 21 0.00098 0.41 14.3 0.1 1 23 596 619 596 619 0.94 8 21 1.8 7.6e+02 4.0 7.2 1 23 657 679 657 679 0.99 9 21 2.7e-05 0.011 19.2 0.1 1 23 727 749 727 749 0.99 10 21 0.00035 0.15 15.7 4.9 2 23 787 809 786 809 0.95 11 21 0.0044 1.9 12.2 1.4 2 23 818 840 817 840 0.96 12 21 0.00072 0.3 14.7 0.2 1 23 853 876 853 876 0.93 13 21 0.0017 0.7 13.6 1.5 1 23 901 923 901 923 0.98 14 21 0.0053 2.2 12.0 0.9 1 23 931 954 931 954 0.96 15 21 0.017 7.4 10.3 0.6 3 23 963 984 961 984 0.95 16 21 0.00051 0.21 15.2 0.8 3 23 1046 1066 1044 1066 0.96 17 21 0.00019 0.079 16.5 0.1 1 23 1101 1123 1101 1123 0.98 18 21 6.2e-06 0.0026 21.2 0.2 2 23 1150 1172 1150 1172 0.93 19 21 0.34 1.4e+02 6.3 0.2 2 23 1192 1213 1191 1213 0.93 20 21 0.00039 0.16 15.5 0.2 3 23 1226 1246 1226 1246 0.99 21 21 0.0014 0.57 13.8 1.3 1 23 1417 1439 1417 1439 0.97
Sequence Information
- Coding Sequence
- ATGACAGAAGATATATTCGTCCGGGCACGGCAAAATTGCTGTCGTCTGTGCTTGGCCCCGGATAGTGAATGTGTTCCAATTTTGACGAGCTTGGCTGCTGATAAGGAACCTCTTTCGTCGAAAATTCAAGCGTGCGTCAACGTGAAGGTTAATCAATCGGATCGTTTATCGTTACGAATATGTCACTCATGTATCAGCTTTATGAACTCATGGCAAAGCTTCAAAAATCGATGTTTAGCCGCGCAAATGAAGCAGATGAATTGGTTGGAAATGGCTAAAAATTCAATGCGCCGACAGGTTGCTAATATGCCATCACAACAAAAGCAAATTTCATCATTTCAACCCTCGAATAAGGCAACGCAAGACAAACCAATTCAAAATCGTTCACAAAATAAACCAGTAACTGGACGACCTATGCCCATGCCGATCATTATCAAGGAAGAACCAATTGACGAAGAAGCTGATGCTCAAGAAGAAGCTGCTATGAGATTGAATTTGGATCCAAcacaatttttagatgaaaatattGTGCCCAAACAGGAAGTTGAAGATAAGGAAGAATCGCTTTTGGAACCAAGTAGATTTATGAATGAAGATCCTCAAATTTTAACGTCGCTTGGTCTGACTCAAATTAGGAAAATTAATCCTTACAGTCAGCAGCTGACCCCAAACTTGGATAGGAAGCGCCAACGAGAAAATCATGAAATAACAGAAGTTCCAGCAACACGGTGTCGATTTTGCCATATGAACTTCTCATCTGCAACCAACGCTCGCCGACATGAACGTAATATACATCGCACATCAGAAGTGAATACCATAGAACCACCCAAGTTTTGTATCAAGCCGACGACACCACGTTCATTGCTAAAACCTCTTCATTCGCTACGATCTAACATAAAGCCAACTCTTAAAGTTGCGCCGCCACCAGTCACACCGGAAATGATGGGAATTTATGAATATAACCGACCGGAAAAATATCGTCATCTTTTAACCGACTCGAAATTGCTTTTCATACGTAAGAACGAGGAGTTCCTTAAGCAATACCAAACATTAACGTGCACATGTTGTCCGCAAACTTTCCCATCATATAAGACATTCATGGCTCATATGCGACGAAAATTCCCGAATTTGGCCAGGAATTTATGTTTTAAATGCTTGAAGCAATTCCAGTCAAAATCAACTTTCGTTGCTCATTTGAAGAAAAGGAGTTGTATAAATTTATATCAGCTTTATAAGGCAGATGATTCGATTTCTAAGACAGGTTTCGAAGCTTTTACCTCAGAGAAGGTAGCCACGAAGGAAGTCCTTAGTAATAAGGTGTACGAATGTAAATTGTGTTCAAAATCATTCCGACTGAAGCTAGATTTCCGCAGTCACGTATATGATGCGCATGGGGAAAGCATAAGAAACGTAGCTCCAGGACGTTGTGCATTTTGTAGTGCAGAACTGGAAGATCCCATTGTGAGACGACGCCATTACAACAATATGGAGTGCGTTGTACTTCTTCGATGCAGCATTTGTCACGAGAAGTTCGAATTTCAACAACAGTTTATTAACCATGTATATGAAACACACTTACCAGCGATCGCTAACAACAATGACGTGTCAGGGGAAGTTTCAGATGCGACGCCTTTGGATGCCTCATCAAATTCACATGTCTCATTGACAGATTCGATTAATTCGAGACTGCCCCACAGTTGCAACATTTGCGGGCAAACATACAATAATTATTACAATGTTCTTCGTCATATGGAAGGTAAACACCCAGACCAAGTGCCTAAACGATATACATGCGACAAATGTGATGCTGGTTTCCCACGACAAGGACCATTGAGGGAACACATGTATGAAGTGCATGGAACGACGTTGCCTCGGGCCCGCCGTGAACTACTCTCTTGCCGCATGTGTAGCGAGCAAATCGATACTAGAGAGAAATGGTTGACGCATCAGGCGGAAAAGCACTCACGCTATACTTGTTGTTATTGCACCTTCCACAGTAAAAGTTTGGACAAATTCAAGGACCACATCGAAACACATCCTCAGCTATCTTCGCGAAACGTTCCAGTACCTGTTGTATCTGATACGAATATGATGTCCGTGACAAATGGAGGAAATGAAGGtgatgatgaggatgatgatgTTAAACCTGCTAAGCGAATCAAACTAGACACATCTCTGTACACGTGTTCTGTGTGCAACGCTTCATTTAGTGGTAATGTTGCTCTCTCAAATCACATGCGCATACATTACACTGCCGACACTCCTGGAGTTGCTGATGATAAGGTAAATTTGCTTAGTGTGGCTCCTCAAATTACATCGACTCCAAATCTCGCAATACCCGATTCAATTCGACGAATTCGATGTCATTTGTGTTCAAAACGTTTCACGTCGAAGAAAACGTATCGAAAGCACATGTTGAATGAACATCAAGTGCGAAATGTAAGCTTCATAAAGTGTAGCGTTTGCAAGGCAGAATTCACCCATGAAAGGGGACTCAGAGTTCATATGTACAAAACACACGGTACCATAATGACAAATGAAACAGTGAATGCGATCTATGAGTGCGAGATTTGTGATGCGGAATTCAAGAGTGAAAAGTCCTTGAATCAGCACAAGGGGATGGTGCACAAGAATCGTGAGAAGGAAGAACCGGTAGAGGTGAATGTTGTTCAACCTGCGCAAAACGGGCCAACTTTTTGGCATCAGTGCAGCTATTGTGCCCTTAGCTTTGATTCGAACAAAAAACTCGCCGTTCATTTGAACAGTCACGAAGAGTTCGATGCGAATGATTATTCATGCAAGGATTGTGGGAATGTGTACAATGGAAGGAAAAGTCTTTGGGTACATCGGTACAAGAAACATCGGGAAGTTCGTAATCCATCTAACTGTCCGCTTTGCAATAAATTATTCCTTACAAGTAAGGCCTTAAAATTGCATATGAAAAATGGCCACGACAAAGACGACGATGAAATTGAAAAGGTGGTAAACGCTAAATTCGAAGACAATGACCAAGCGGAGTTGAAAAAGGAAGAAGAGAGTGAAGATGAGCAGGAGGAAGAACAAGACGACGAACAGCCTATGGAGGAGGATGATGATGCCCAAAATGGCTTAGATTTATTGGCTGGAAAAGTCCATTGCTCAGTATGTAACGAGGAATTCACTGATCAAGATTTATTTGACAAACACATGGAGATGCACCAGATTGATTTATACAGCGATAATCCGCTGGCAGCGATGTTTGATACGGGGCCAGATGATCCTAACGAATATTTCATGAATAGAATGAGCGAGAATGGCGCCTACACGTGTGACATATGCCCGAAGAGTTTTCCAGCTCTTACAGCATTGAAAGTGCATCGCAATTGGCACTTTCGCCAAGATGGTAAACAACAGGTGCCCGCCGACTCAAACATGCGATCTATGGTACAGAAAAAGAAAGCTGGCAATGTGTGTGAATTTTGCGACACGAGCTTTTCAAGCGCGAGTAACCTTCGAAGGCATATAATAGAAGTCCATAATCGCGACAATATGAATAATCCTGACCGGGCGAAGAAATTTATGGATAAATATCTAGAATGCTCAAAATGTGCTATGAAATTCGATGAAAAATCGGAATGGGTAAAGCACAAAATTGGTCACGCGAATGAAAGTTTTATTTCGGCATTCGAATGGGGATGTGAAATTTGTGGTAAAATAGTTTCAAGGAAAGAGCGTCTTGTCCAACACATGAACAGTCATCTGAAGAAGAGGGAACAAGAAGATGGAAGAGCGAGTGTGATGAGCGAAGAGCAAAGCAATTCGCAGGACACTGTACTTTCGAGCCACCAAAGTCGACGCAGCACGACTGGTAAGCCAAGAACAGGAGAAGATGACGATGCCGACCCAGAACACGAACCCGATGCAGATGAGAAGGATCGAACTGAGGGAGATGATGCGTTCGAAAGCCGAGAGGAAAATGCAGATGATCCTGAAGACGAGGATGGTCCCGGTGAACAAGAGACAGATGaggaagatgaaaatgaagatgaaaatgaagatgaaaatgaggaCGACGATGAGAATGATGATGAAGCCGATGACAAGCTGAACGAAGAACATGACGCTAAAGAGAATAACCATATACAATATGATGACGACTCTAGCCAACAGTACCAAGAAGTTGATCCTGATCAAGATGATATCCAGgacgaagacgaagaagaagaagaggaaggagAAGAAGAGGAGGATCAGGATAATATTGGTGCATACTCGTGCGATTTATGTCAGGTGTATTTTGAGACATCAAAGCAACTGCGTCGCCATGTAACGAGTCATTTTCTGAACGGCCCTGGTTCAGTTACCTTAACGCAAATACCCAAAGAAAAATCATACGTCTCGAAGGTAGAAACAGATGACACTCCAACCTTAATGCCTGCATAA
- Protein Sequence
- MTEDIFVRARQNCCRLCLAPDSECVPILTSLAADKEPLSSKIQACVNVKVNQSDRLSLRICHSCISFMNSWQSFKNRCLAAQMKQMNWLEMAKNSMRRQVANMPSQQKQISSFQPSNKATQDKPIQNRSQNKPVTGRPMPMPIIIKEEPIDEEADAQEEAAMRLNLDPTQFLDENIVPKQEVEDKEESLLEPSRFMNEDPQILTSLGLTQIRKINPYSQQLTPNLDRKRQRENHEITEVPATRCRFCHMNFSSATNARRHERNIHRTSEVNTIEPPKFCIKPTTPRSLLKPLHSLRSNIKPTLKVAPPPVTPEMMGIYEYNRPEKYRHLLTDSKLLFIRKNEEFLKQYQTLTCTCCPQTFPSYKTFMAHMRRKFPNLARNLCFKCLKQFQSKSTFVAHLKKRSCINLYQLYKADDSISKTGFEAFTSEKVATKEVLSNKVYECKLCSKSFRLKLDFRSHVYDAHGESIRNVAPGRCAFCSAELEDPIVRRRHYNNMECVVLLRCSICHEKFEFQQQFINHVYETHLPAIANNNDVSGEVSDATPLDASSNSHVSLTDSINSRLPHSCNICGQTYNNYYNVLRHMEGKHPDQVPKRYTCDKCDAGFPRQGPLREHMYEVHGTTLPRARRELLSCRMCSEQIDTREKWLTHQAEKHSRYTCCYCTFHSKSLDKFKDHIETHPQLSSRNVPVPVVSDTNMMSVTNGGNEGDDEDDDVKPAKRIKLDTSLYTCSVCNASFSGNVALSNHMRIHYTADTPGVADDKVNLLSVAPQITSTPNLAIPDSIRRIRCHLCSKRFTSKKTYRKHMLNEHQVRNVSFIKCSVCKAEFTHERGLRVHMYKTHGTIMTNETVNAIYECEICDAEFKSEKSLNQHKGMVHKNREKEEPVEVNVVQPAQNGPTFWHQCSYCALSFDSNKKLAVHLNSHEEFDANDYSCKDCGNVYNGRKSLWVHRYKKHREVRNPSNCPLCNKLFLTSKALKLHMKNGHDKDDDEIEKVVNAKFEDNDQAELKKEEESEDEQEEEQDDEQPMEEDDDAQNGLDLLAGKVHCSVCNEEFTDQDLFDKHMEMHQIDLYSDNPLAAMFDTGPDDPNEYFMNRMSENGAYTCDICPKSFPALTALKVHRNWHFRQDGKQQVPADSNMRSMVQKKKAGNVCEFCDTSFSSASNLRRHIIEVHNRDNMNNPDRAKKFMDKYLECSKCAMKFDEKSEWVKHKIGHANESFISAFEWGCEICGKIVSRKERLVQHMNSHLKKREQEDGRASVMSEEQSNSQDTVLSSHQSRRSTTGKPRTGEDDDADPEHEPDADEKDRTEGDDAFESREENADDPEDEDGPGEQETDEEDENEDENEDENEDDDENDDEADDKLNEEHDAKENNHIQYDDDSSQQYQEVDPDQDDIQDEDEEEEEEGEEEEDQDNIGAYSCDLCQVYFETSKQLRRHVTSHFLNGPGSVTLTQIPKEKSYVSKVETDDTPTLMPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01376068;
- 90% Identity
- -
- 80% Identity
- -