Basic Information

Insect: Odontomyia ornata
Gene Symbol: -
Assembly: GCA_963969285.1
Location: OZ017739.1:420476127-420482209[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00054 0.23 15.1 0.7 1 23 162 185 162 185 0.96

2 16 0.015 6.5 10.5 1.0 1 23 190 212 190 212 0.97

3 16 0.066 28 8.5 0.7 1 17 218 234 218 235 0.92

4 16 4e-07 0.00017 25.0 1.1 1 23 266 288 266 288 0.99

5 16 3.6e-06 0.0015 22.0 1.5 1 23 294 316 294 316 0.98

6 16 3.4e-05 0.014 18.9 0.9 1 23 333 355 333 355 0.98

7 16 0.00026 0.11 16.1 1.7 1 23 361 383 361 383 0.97

8 16 7.1e-05 0.03 17.9 1.2 1 23 389 412 389 412 0.94

9 16 0.00038 0.16 15.6 1.0 1 23 419 442 419 442 0.96

10 16 0.00049 0.21 15.2 0.2 1 23 496 518 496 518 0.98

11 16 1.6e-06 0.00069 23.0 0.2 1 23 524 546 524 546 0.98

12 16 5.6e-05 0.024 18.2 1.0 1 23 552 574 552 574 0.99

13 16 0.51 2.2e+02 5.7 5.6 1 23 580 602 580 603 0.95

14 16 1.4e-05 0.0059 20.1 5.1 1 23 611 633 611 633 0.97

15 16 4.6e-07 0.00019 24.8 0.8 2 23 641 662 640 662 0.98

16 16 1.9e-06 0.00079 22.8 4.0 1 23 668 690 668 690 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00054	0.23	15.1	0.7	1	23	162	185	162	185	0.96
2	16	0.015	6.5	10.5	1.0	1	23	190	212	190	212	0.97
3	16	0.066	28	8.5	0.7	1	17	218	234	218	235	0.92
4	16	4e-07	0.00017	25.0	1.1	1	23	266	288	266	288	0.99
5	16	3.6e-06	0.0015	22.0	1.5	1	23	294	316	294	316	0.98
6	16	3.4e-05	0.014	18.9	0.9	1	23	333	355	333	355	0.98
7	16	0.00026	0.11	16.1	1.7	1	23	361	383	361	383	0.97
8	16	7.1e-05	0.03	17.9	1.2	1	23	389	412	389	412	0.94
9	16	0.00038	0.16	15.6	1.0	1	23	419	442	419	442	0.96
10	16	0.00049	0.21	15.2	0.2	1	23	496	518	496	518	0.98
11	16	1.6e-06	0.00069	23.0	0.2	1	23	524	546	524	546	0.98
12	16	5.6e-05	0.024	18.2	1.0	1	23	552	574	552	574	0.99
13	16	0.51	2.2e+02	5.7	5.6	1	23	580	602	580	603	0.95
14	16	1.4e-05	0.0059	20.1	5.1	1	23	611	633	611	633	0.97
15	16	4.6e-07	0.00019	24.8	0.8	2	23	641	662	640	662	0.98
16	16	1.9e-06	0.00079	22.8	4.0	1	23	668	690	668	690	0.99

Sequence Information

Coding Sequence: atgaatgtgGAGCTCACCCAAGTGGTCAATACAACTTTATCATCAAAATCAGCTATTAATGACGAAGAAATACAATTATTCATTGAAGCCGGGTACAAGCCAGAGGATCTTGCAACAGTTCTTGATGCTAATAACTCGACTGTAGCAAAATCGGACACAGTAGAGGGTTTAATATTTGAAACAGAACCTGTAACAGTGGTAAAACCGTCTGATAATGATGAATCGATTGAACAATCGGACAAAACAGAAGATATCTGCTATGATGATAATCTCGAATCCAACGatcaagaaaattatattttagaaCAATATCACATTGAAGAAGAAAGCACTTATTCGGATAAACTCGAAAATAACGACGAAGATTCGCAGGAAATTGAATTTATCAAACCGAAAAAACAATCAGCACCAAGTACAGAGATTAGTCCTGAAGCTGATCAAAGTTTAACAAAAGTTGGTGAATCGATACAAGAGTTGCAACCATATATTTGCGATGAATGTGGTAAAAATTTTAATGATAAGAAAGATTGCGAAGATCATATACTTTCGATACATGGCCAGAAAACATTTATTTGTGAATATTGTTGTAAAAGTTTTGATTCCATAAGTTTGTTAGATTCCCATTTATTAGTTCACGCTAGCAAGAAGGGCCATAAGTGTGAAGAATGTGAAGAATGCTTTGGCTCTAAAGATAAATTAATGGTAGGTTGGATTTTGAGTCTGATACCATACAGTTCTCGTACATTCTGTGTTTCGTTGCAGCAACATATGAGCATTCATACGGGAGAGCAACCATTCAAATGCAACGTATGCAATAAGACATTTGCTCAGAATAATTCGCTTGTATATCACATGAGAGTACACACTGGTGAAAGGCCTTTCGAATGTGATCAATGTGGAGCGAGGTTCCGTTTAAAGGGTAGCTTAAAAcaTCATATGCGTGTTCATTTAGAGGGAAAACCAGTAAACAAAAAACCCATTATTGGAGGGAAAGTTTTTACTTGCACAGAATGTCAAGCCGTCTTTAAAAGAAGATCAGTGTTAAAGGAACATATGTTCATTCATACAGGCGAGCGCCCTTTCACATGTGATGTTTGCGGTAGAGGATTTACACAAAGTCATTCTTTGATATTCCATGCAAGGCGACACACTGGGGAAAAACCGTACACTTGTGAAACTTGTGGCTCAGCCTTTCGCCATGCAAGTGGATTAAAACGTCATGTTTTTATCAAACATTCTAGCCATCCAACCGATTTTAAATGCGATGAATGCTTTGCAACTTTTCGATCTAAAGAAGATTTAGACGTTCATAAAAGAGAACGCCATTTACAAAATCCTATCAATGATGAAAATGAAGAAACCTCCAAAGAAAATCAACAGCAAGATCAAAAAATGTCTAGTCAAGAaatcacaattataaattcaaATCCGCCGAACGATAGTAACCCACTGGCAGATGTAGAAAAAGTTATGGAAATTGGCATGTATACTTGTGTTCAATGTCGTGCCGGATTTGAAACTCAAGCACAATATGCAGCACATATGCGAAATCATGGTGAAATTAAGCCTTTTCGGTGTGAAATATGTGGCAATGGCTTTACTCAGAATGGTTCATTGAAACAACATATGCTGATTCATACTGGCGAACGCCCTTACACCTGTGATATATGTGGGAGAGGTTTCACACAAGGGAAATCTTTAACCTTTCATATGCGAAGACACACGGGTGAGAAACCGTTTGAATGCGATCTATGCGACTCAAAATTTCGGTTGAAGTATTCGTTGAAGTGCCACATAGATAAGCATCATTCTGACCAACCAGCAAAAGTACATATATGTTCAATCTGTCACAAAGTGTTcaattcaaaacaaaacttggATAATCATATGAAAAAGCATGATGAAGATAGTTTggaaatgaaatgtgaaaagtgTGATAAATCATACTCATCTAAAGTGAGTTTGGAAGCACATCTTCGTACTCATACAGAAGAGAAACCATTCAAATGTGATGAATGTGGAAAAGAATTTATTCGAAAATGCTCACTCCGACGACATGAAAAAACTCACATGGGAAAGGAAGAGTGTTGA
Protein Sequence: MNVELTQVVNTTLSSKSAINDEEIQLFIEAGYKPEDLATVLDANNSTVAKSDTVEGLIFETEPVTVVKPSDNDESIEQSDKTEDICYDDNLESNDQENYILEQYHIEEESTYSDKLENNDEDSQEIEFIKPKKQSAPSTEISPEADQSLTKVGESIQELQPYICDECGKNFNDKKDCEDHILSIHGQKTFICEYCCKSFDSISLLDSHLLVHASKKGHKCEECEECFGSKDKLMVGWILSLIPYSSRTFCVSLQQHMSIHTGEQPFKCNVCNKTFAQNNSLVYHMRVHTGERPFECDQCGARFRLKGSLKHHMRVHLEGKPVNKKPIIGGKVFTCTECQAVFKRRSVLKEHMFIHTGERPFTCDVCGRGFTQSHSLIFHARRHTGEKPYTCETCGSAFRHASGLKRHVFIKHSSHPTDFKCDECFATFRSKEDLDVHKRERHLQNPINDENEETSKENQQQDQKMSSQEITIINSNPPNDSNPLADVEKVMEIGMYTCVQCRAGFETQAQYAAHMRNHGEIKPFRCEICGNGFTQNGSLKQHMLIHTGERPYTCDICGRGFTQGKSLTFHMRRHTGEKPFECDLCDSKFRLKYSLKCHIDKHHSDQPAKVHICSICHKVFNSKQNLDNHMKKHDEDSLEMKCEKCDKSYSSKVSLEAHLRTHTEEKPFKCDECGKEFIRKCSLRRHEKTHMGKEEC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01089667;
90% Identity: iTF_01089667;
80% Identity: iTF_01089667;