Oorn137833.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- lola
- Assembly
- GCA_963969285.1
- Location
- OZ017742.1:124647331-124649300[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-11 8.9e-09 38.1 0.0 4 43 363 402 360 404 0.91 2 2 9.8 3.7e+03 0.9 0.5 4 20 496 511 495 514 0.91
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGATGCACAAACGTATTGCTTACGTTGGAACAATCATAAAGCCAATTTAGTAGAAATCCTAGATGCTCTAATAAAAATGGAAAGCTACGTGGATTGTACATTAGTGGTTGAGGATCAAATACAGTTCAAGGCACACCGTGTCGTTTTGGCAGCCAATTCGCCATACTTTCAGAGTATACTTCAAGATGTACCAATGGACCATTGTAGTATACTTATACCAGGCGTTCAGGCATTTGAAATGCGTGCTTTGCTAGAGTACATGTATACAGGCGAAGTGAACGTGACTCAAAGTCAAATtcctaaaataatgaaaattgccGAGCAGCTTGAAGTAAAAGGACTCTTTGATATGGCTGATTTAAAAGAGAAATTCAACAAAATCGAGGAGACGAGCCCGCGAGCACCCACGGAAACATCAACACCGACGAAGGATCCCATTGAACCGATACCACCACAAGCTCAATCGTCTCCTGTCATTAGTACGACGGCTTCAAATCCAGTGCCACCTCAAAATCGTGATCCATCACCGCCTTATGTTTATAAGCCACCGTATTGTAATATTTATGCAAAGAGTCCTGGTCCATCAACATCTGAGAGGCAGCATACTAATCCGTGGCCTCTTTCTCCCCATCTGCCTTCAACAGTGCCAAGCGCAGCAGCTGCAGCTATGTTGACTTCAGTCTACGAAGCTGGGTCAGACATGAATCCATTAAAACGGAAAAAGATCTCGTCTATGTCGAACATGTTGATGACCCGAGACACACCAATATTGCGAAATGTACTAGCGCAATCACATGTACCAGACTCATCGCAGCCAATGCCTCTTGTATGCCAGCCAGTCAAGCAGGAGAGAATGGAAAAATCACCCTTGGAGAACTGTAATGGTGCAGATTACAATATGGATAAGaAGATGTCAAAATATCAAGAACCGCACTCGCCATACACTGATAAGTCTTTTGAAGACGACTGTTTAGATCTACCACCAAATTATGGAAGTGAACCGCATTTAGCTTCATATGTTCCGCAGCAGCAGCAGAAGCCTGAATGGAAGCGTTATAAACAGTACACAAGGAGCGACATTTTGTCTGCAATTGAATGTGTAAGAAACGGAATGAGTGCTTTACAGGCTTCACGTAAGTATGGAGTCCCATCCCGCACACTTTACGATAAGGTAAAGAAACTGGGTATCACCACGGCCCGGCCAACAAATCGAACTATAAAGCGAAGTCCTAGCAACAGTGGAGGTCAAAGTACCTTCCGTTTTGGTTTGGCTGGTCGAGGTCATACCTATGGCCCGAACGAGCaaattttacaacaaatacaCGATGCAGCTGAACGTGAAAATGATCGTGAACGGCAACTACCCGCAACAATTCCTCATCCTGCAGCTGCCCTTCTTGACCCGGCGTTTCTCCAGCAAGCATTCGAATCCAGAGGCGGAGAAATCGCTGGACGAGAAGCATTGCATGCGATGGCTCTGGCAGCAGCAGCGCATGCGGCAGCTAATGGTATTTCAACTAGTCCTGGAGCGAATGGAACCGCAAGATCTCCCAGTCCTATGAAATATGCTCACCGTCCCCAAAGTCCATCGATGATGCATGAACGAGAACACGAGCAGCTTGACGAAGATGACGACGACCAAGTTGAAGACTTATCAGTCGGAGCACGAAAGGATGTAGAATCACCTATTCCCCATCCATCTATCCCGCATACATATCTACAGCAGCAGGAACAACGTCATCAACAAATCCTCAAACTACATCAGCAGCAAACTGGTGTCATTGTTCCGCCCATGACCAAACTGCCCTCCTCCAATGGTGGCGATGATTATCCACAAGAACTGAAGAGAGAACCTCCGACTGAAGACAACGCGTCAAGAGAATTTCAGGAATCCTAA
- Protein Sequence
- MGSSDAQTYCLRWNNHKANLVEILDALIKMESYVDCTLVVEDQIQFKAHRVVLAANSPYFQSILQDVPMDHCSILIPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMADLKEKFNKIEETSPRAPTETSTPTKDPIEPIPPQAQSSPVISTTASNPVPPQNRDPSPPYVYKPPYCNIYAKSPGPSTSERQHTNPWPLSPHLPSTVPSAAAAAMLTSVYEAGSDMNPLKRKKISSMSNMLMTRDTPILRNVLAQSHVPDSSQPMPLVCQPVKQERMEKSPLENCNGADYNMDKKMSKYQEPHSPYTDKSFEDDCLDLPPNYGSEPHLASYVPQQQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTARPTNRTIKRSPSNSGGQSTFRFGLAGRGHTYGPNEQILQQIHDAAERENDRERQLPATIPHPAAALLDPAFLQQAFESRGGEIAGREALHAMALAAAAHAAANGISTSPGANGTARSPSPMKYAHRPQSPSMMHEREHEQLDEDDDDQVEDLSVGARKDVESPIPHPSIPHTYLQQQEQRHQQILKLHQQQTGVIVPPMTKLPSSNGGDDYPQELKREPPTEDNASREFQES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01127244;
- 90% Identity
- iTF_01088626;
- 80% Identity
- iTF_01088626;