Oorn020466.1
Basic Information
- Insect
- Odontomyia ornata
- Gene Symbol
- Su(H)
- Assembly
- GCA_963969285.1
- Location
- OZ017738.1:262314857-262315423[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.66 5.6e+04 -2.7 0.0 25 45 30 50 21 54 0.55 2 2 3e-64 2.6e-59 201.9 0.0 1 122 67 188 67 188 0.99
Sequence Information
- Coding Sequence
- ATGCTATCGGTGAAGATGTTCTACGGGAATGGTCATGATATTGGTGTTTTCAATTCAAAGCGAGTAGAAGTCATTTCAAAGCCATCGAAGAAAAAACAATCTCTCAAAAATTCTGACCTATGCATAGCCAGCGGAACAAATGTTGCTCTATTTAATCGTTTGAGATCACAGACTGTATCGAACCGATATCTGCATGTAGAAAGTGGACATTTCCACGCCAGTTCAACACAGTGGGGTGCATTCACAATTCATTTGCTTGATGATAATCAAAGCGAATCTGAAGAATTCCAGGTTCGAGATGGCTACGTCCATTATGGATCGACGGTAAAGTTAGTTTGTTCGGTGACAGGGATAGCGCTACCTCGATTAATTAATCGCAAGTTCGACAAACAAATGGCTCTCTTAGAAGCTGACGACCCAGTTTCGCAGCTTCACAAATGTGCATTTTATATGAAAGACACGAAACAAATGTATTTATGTTTATCGCAAGAAAGAATCATTCAATTTCAAGCATCTCCTTGTCCGAAGGAAGCAAATAAAGGAATGATAAACGATGGTGCTTGTTAG
- Protein Sequence
- MLSVKMFYGNGHDIGVFNSKRVEVISKPSKKKQSLKNSDLCIASGTNVALFNRLRSQTVSNRYLHVESGHFHASSTQWGAFTIHLLDDNQSESEEFQVRDGYVHYGSTVKLVCSVTGIALPRLINRKFDKQMALLEADDPVSQLHKCAFYMKDTKQMYLCLSQERIIQFQASPCPKEANKGMINDGAC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00306724;
- 90% Identity
- -
- 80% Identity
- -