Oalb033576.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- PRDM16
- Assembly
- GCA_949825065.1
- Location
- OX463867.1:9108705-9116669[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0045 12 6.6 0.0 17 33 401 417 398 420 0.88 2 12 0.17 4.4e+02 1.6 0.1 19 33 456 470 452 473 0.79 3 12 0.063 1.7e+02 2.9 0.0 18 33 514 529 510 532 0.81 4 12 0.0039 10 6.8 0.0 17 33 572 588 568 591 0.88 5 12 0.063 1.7e+02 2.9 0.0 18 33 648 663 644 666 0.81 6 12 0.0039 10 6.8 0.0 17 33 706 722 702 725 0.88 7 12 0.0036 9.5 6.9 0.0 16 33 758 775 755 778 0.88 8 12 0.0036 9.5 6.9 0.0 16 33 798 815 795 818 0.88 9 12 0.0036 9.5 6.9 0.0 16 33 851 868 848 871 0.88 10 12 0.0036 9.5 6.9 0.0 16 33 910 927 907 930 0.88 11 12 0.0041 11 6.7 0.0 17 33 964 980 961 983 0.88 12 12 0.0032 8.4 7.1 0.0 17 33 1023 1039 1020 1042 0.87
Sequence Information
- Coding Sequence
- ATGAACTCCCGGGAAGTTTTCCCCAAATGGGAACATGAAGAAGCCTCGGTCGTATCTGTGGAAGAGGAGACAGCGGATGCTGAACAGCTCGGGACGTTGTCGGTGCCGGAGTACGGTATAGACATAGAAGAGACTGATGTCAAGGCGGAGTGCGCTCGACTCAACAGTGCAGGGGCTGGACACACACGCACAGAGTACAAACTACCTGACACGGGCTTTGAAAGTAATGCTGCTGGAGAGGACAGAGAGGATGCTGAACAGCTCGGGACGTTGTCGGTGCCGGAGTACGGTATAGACATAGAAGAGACTGATGTCAAGGCGGAGTGCGCTCGACTCAACAGTGCAGGGGCTGGACACACACGCACAGAGTACAAACTACCTGACACGGGCTTTGAAAGTAATGCTGCTGGAGAGGACAGAGAGGATGCTGAACAGCTCGGGACGTTGTCGGTGCCGGAGTACGGTATAGACATAGAAGAGACTGATGTCAAGGCGGAGTGCGCTCGACTCAACAGTGCAGGGGCTGGACACACACGCACAGAGTACAAACTACCTGACACGGGCTTTGAAAGTAATGCTGCTGGAGAGGACAGAGAGGATGCTGAACAGCTCGGGACGTTGTCGGTGCCGGAGTACGGTATAGACATAGAAGAGACTGATGTCAAGGCGGAGTGCGCTCGACTCAACAGTGCAGGGGCTGGACACACACGCACAGAGTACAAACTACCTGACACGGGCTTTGAAAGTAATGCTGCTGGAGCGCACAGAGAGGATGCTGAACAGCTCGGGACGTTGTCGGTGCCGGAGTACGGTATAGACATAGAAGAGACTGATGTCAAGGCGGAGTGCGCTCGACTCAACAGTGCAGGGGCTGGACACACACGCACAGAGTACAGCAGAGTGTCGAGTTTCATGAGAATTATTTGGCCTCCAGAACTACCTGACACGGGCTTTGAAAGTAATGCTGCTGGAGAGGACAGAGAGGATGCTGAACAGCTCGGGACGTTGTCGGTGCCGGAGTACGGTATAGACATAGAAGAGACTGATGTCAAGGCGGAGTGCGCTCGACTCAACAGTGCAGGGGCTGGACACACACGCACAGAGTACAattGTGACATCACATCAGGCAGAGTGTCGAGTTTCATGAGAATTATTTGGCCTCCAGAACTACATGACGCTGGCTCTGGAAGTGATGCTGCTACTGGGACACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAGTGATGCTGCTACTGGGAAACCCTTTAAGTGTGACCACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGATGTTGACATCTCATCAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAGTGATGCTGCTACTGGGAAACCCTTTAAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGATGTTGACATCTCATCAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGAAGCGGGCTCTGGAAGTGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGtagacagaaaGGGCGGAATGCTTAACTTCAAACAACCTTATATTTTAGATGTTGACATCTCATCAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAGTGATGCTGCTACTGGGAAACCCTTTAAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGATGTTGACATCTCATCAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGAAGCGGGCTCTGGAAGTGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAATGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGAACTACATGACGCGGGCTCTGGAAATGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAATGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAgATGTTGACATCTCATCAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAATGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAGTGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAGTCAGTTTAATAAACCACATCAGGAACCACAAAGATGTTGACATCTCATCAGGCAGAGTCTCGAGTGTCATGAGTATTAATTGGCCTCCAGAACTACATGACGCGGGCTCTGGAAGTGATGCTGCTACTGGGAAACCCTTTGAGTGTGATGACTGTGGGGAGATGTACAAAAGCAAAATCAGTTTAATAAACCACATCAGGAACCACAAAGGCAAATTTTAA
- Protein Sequence
- MNSREVFPKWEHEEASVVSVEEETADAEQLGTLSVPEYGIDIEETDVKAECARLNSAGAGHTRTEYKLPDTGFESNAAGEDREDAEQLGTLSVPEYGIDIEETDVKAECARLNSAGAGHTRTEYKLPDTGFESNAAGEDREDAEQLGTLSVPEYGIDIEETDVKAECARLNSAGAGHTRTEYKLPDTGFESNAAGEDREDAEQLGTLSVPEYGIDIEETDVKAECARLNSAGAGHTRTEYKLPDTGFESNAAGAHREDAEQLGTLSVPEYGIDIEETDVKAECARLNSAGAGHTRTEYSRVSSFMRIIWPPELPDTGFESNAAGEDREDAEQLGTLSVPEYGIDIEETDVKAECARLNSAGAGHTRTEYNCDITSGRVSSFMRIIWPPELHDAGSGSDAATGTPFECDDCGEMYKSKVSLINHIRNHKGRVSSVMSINWPPELHDAGSGSDAATGKPFKCDHCGEMYKSKVSLINHIRNHKDVDISSGRVSSVMSINWPPELHDAGSGSDAATGKPFKCDDCGEMYKSKVSLINHIRNHKDVDISSGRVSSVMSINWPPELHEAGSGSDAATGKPFECDDCGEMYKSKVSLINHIRNHKVDRKGGMLNFKQPYILDVDISSGRVSSVMSINWPPELHDAGSGSDAATGKPFKCDDCGEMYKSKVSLINHIRNHKDVDISSGRVSSVMSINWPPELHEAGSGSDAATGKPFECDDCGEMYKSKVSLINHIRNHKGRVSSVMSINWPPELHDAGSGNDAATGKPFECDDCGEMYKSKVSLINHIRNHKELHDAGSGNDAATGKPFECDDCGEMYKSKVSLINHIRNHKGRVSSVMSINWPPELHDAGSGNDAATGKPFECDDCGEMYKSKVSLINHIRNHKDVDISSGRVSSVMSINWPPELHDAGSGNDAATGKPFECDDCGEMYKSKVSLINHIRNHKGRVSSVMSINWPPELHDAGSGSDAATGKPFECDDCGEMYKSKVSLINHIRNHKDVDISSGRVSSVMSINWPPELHDAGSGSDAATGKPFECDDCGEMYKSKISLINHIRNHKGKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086454;
- 90% Identity
- iTF_01086454;
- 80% Identity
- iTF_01086454;