Basic Information

Gene Symbol
egg
Assembly
GCA_949825065.1
Location
OX463866.1:19263276-19350652[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.36 2.7e+03 -0.9 0.0 29 38 1818 1827 1801 1828 0.83
2 2 2.7e-13 2e-09 37.9 0.0 5 71 1860 1919 1856 1924 0.87

Sequence Information

Coding Sequence
ATGGCTTCGAACAACGATCAAGACCTTTCCAAGGAGAGTATGGATATAGACGATCTGTCTTTGGAAGCATCAATGGAAGATTCGGCGGAGAAGACAGGAAAAGTTGTCGAGACGTCTGATAAAGTTGAAACTGAAAACGATATAGAGAATGCCCTTTTGAATGATTCCTCTGATGGTGAAAGCACATTTTTGGGATTCAAGTTAGACTTTGATAGTCCAGAGAAACccaaaataaatactgaatcaAATAAGGAATGTAAAACAGTCGAGGATCTAAAAACAATTGAATCAAAAACAGTTGATGATCTAAAAACTCTTGAATCTAAAACAGATGAAAGTGTCGAAACAGTTGATGATCTAAAAACTCTTGAATCTAAAACAGATGAAAGTGTCGAAACAGTCGATGATCTAAAAACTCTTGAATCTAAAACAGATGAAAGTCTCGAAACAGTTGATGATCTAAAAACTCTTGAATCTAAAACAGATGAAATTGTAAAAACAGTTGATCTAAAAACTCTTGAATCTAAAACAGATGAAATTCTAAAAGCAGTCGATGATCTAAAAACTCTTGAATCTAAACCGGATGAAATTCTTGAAACAGTTGATGATCCGAAAACAAGTGAAGATCAAATAGAAAGTAAATTAAAGGAAAGTTCGATTAAAGAAAGATTAGAAACAGATGATAGTAGTCGAGACGATAAAGGAAAAGAGGAACGTAGTGgtgttgaaaaatgtttaagtattGAAAAGACCGTTGAGGAAGAATTCAGAATAGATGACAGATCTCCTGAAAGAATACCAGAAAAAGAATCGACAAGGAATGAAAAATTGGATACTGTAGAAGAAAAACAGTTATTGAGCGATTCAAGTGTAATTGAAGGTGAAACTAGCGCAAGTATATCCAACGTGACCGAATACTTTTCCAAAATTGAAGATGAACTGTTGAAAAGTAACGATTTTGATCGCATAATCAACGAGTTTAGTAGTTCACTGTCGAAAGGAGATGCTGTATCCGAGGTCTCGTCGAGGATAGATAATATATCGAATGAATTTGACGACGATGATACTAGTTTTTCTGGATCCAATTCAGCTGTGCAAAAAATCATCGCTAGCAAATTTGCCGATATCGAACAAACTATATCGGATATCACCGCAGATCTTGGTAGTGATGGAAACAAAAATGTACaaagtgacgaagaagacggagaAAGTTCAACGTCGGAAGCGAAAGAGGATTCGAACGATAATATGAGTACCGAAGAAGTTCTTAAAGATAATTCAAAAGAGAAAGCAGAGGTTGATGAAGATATAAGTGGGGATGATGGATCTAAAGATGGGGTACAGACCGAGAAAGAAGGAGGTGAACATGGCAAAAGTAAGAAATCAAGCGCGTTGGCTGAAATTAAAGCGAAGAACGATCAACAGATGGTCGACTTGGAAGACGCTTCAATGGACGGAGCCCATGAAACGGATGCCCTGGGCCTGTTGGCAGAGGCTGAAGGCAGAGAGAGGCACTCCTCAGaccctgatgatgatgatgaagaggACGATGATGTCACCTCGGAAAGGGACAGCATGGAATCACATAACTATGCGAGTGAACGAGAAGAGTCTGCGGATGACCCAGATGAAATGACAGAACCCTCGGATGAAGACTACGATCCCATAGCTGAGGATGATCTTGATGAAGATGACGACATTGATGAGGAAGACGAGGATGGATTGAACTTCCGTGGCAACTTCCGCGGCACGTCTAGAGGCGGACAGAAACGTAGGAGGTCCGTCGTAGACCCACCGCCGGATATGAGAACGGAGAATGAATATTCTATGCAGATAGAAGAAGAAACTAGTCAAGGTAATGCGGAACTACAGAATAATTCAGAACTCAACGAAGATACCGCAAATCAAGATTTGTTGCCGAACGATGATATGGAATTAGATGATACCGTTGGGCAGAATATACTATCTATATGCAACGTCACAAGTTTGTCCGTGGATCAAAACGGTGTCGAACAGTCTCTGGAAGAGGCTGAGAATGATTTGGAAAGAAACGACGAAGAAGAGGCTGAGAATGATTTGGAAAGAAACGACGAAGAAGAGGCTGAGAATGATTTGGAAAGAAACGACGAAGAAGAGGCTGAGAATGATTTGGAAAGAAATGACGAAGAAGAGGCTGAAGCGAACTTAGTTATCACCTCATTTGGCACAGCGGATGAAGAGATATTGAAGAAACTTAACGAAACCGTTGATGATAAAGCGGAAATCGGAAAAAAATCTGATGAAATAGATTCGAACGACGCTGAAGTCACAACTCCAACAGCCACCGATGAACAGATCAATGTCGGAGCGTCTGAAGGTGTTGTTGAATCTCCGAAAGATAAAACGGACACTGAAACATCGGCTGACGATACTGCAGACTTAATGAATGTCTCTCAAGAGGAGGAGATTCAGAATCTGTGGGACTCCATCATGGAAGGGGACAGTAATAAAGAGATCAGTAATAAGAGAAAGGCAGACGATAGTTTAGAGAAGGCGAGGAAGAAATTGGACACTAAACAAGTGTCGGAAGAGGTAGACGATGATGTTTTGACCTTTGCCAGGGATCACGGAAAAGTTTTTCCCGCTGTGGAAGATGCTCAGGACCACAGTGATAAGCCGGATGACCTGAGCACCACCCTCGATAGACTGACCCAAGTCCTTGAGAAGTCGCCCGAATCACCGGTCCCTGAGGAGTCTGTGGAGAAGACAGTTCAACCGGACAAGGTTCTGCTTATCAAAGAGGAGAAAGACGCAGATGCTTATGTGGAAACACCTTCGAAAGATCTTTATATGTCGATCGGCTTGACAGTGAAGGTGGAGAAGCCAGATGAGGCGCAGCCAGTGGCGACCGTCGATACGGCATGTCAGCCTGCCGCGCCCTCTTCCATGGACTTGGATATACCTGCTGAAGtaaatataaaagtaGAACCGGCGCCCAGTGAAAAGAAGACCGTTGAGACTGAACCAAGCCAGGCAGTGGAGACAGAACCAGTGCCGGATGTCAAAGAGACGGCTATTCCTGCAGATACTGTTCCTGTAGTAGCCGTAGCGGAACCTTCACTCGAGCCTGCCTTGGTGCCGGAGAAACCTGTTGAATCCAGCGAACCACCTGAAAAACTTGATGTTGCAGTACCTTCGGAGaagcCACTTCCCAAGAGTGAAAAACCCATCGCAGACGTAGTGACAACTCCTGCAGCATCTAAGATTGATGAAGTCGTAACCAAGCTTGCGACAAAGCCGGTGTCTGAGGTGTTCTCCCTGGACTCTGACGATGAAGATGAGGCAGCCAAGGCCAGCCCTGTTCAAGtttcgCAGCAAGAGGCAATTAAGAAACTCGATGACCCGTCTCCTACCAAAAAAGATCTCTCGCCCCGCAGTCGCGATCAAGTGGCCGTAAAGGGCGACCGCGGCAAGTGCGTGAACCCAGCATGTGTGAGCGCTGCTGCACCGCATCCGTGTCCCCTGTTCCTGCCCTCGCTGTACCGGGCCAGGGACCTCACCAAGGCACCTCTCGCCTGCAAGGAGTGCCTCGACAGGGGCGTAGCCCTCATGGAGCTGCTGACGTCCCGTCTCCGTGCAGGCGTATGCCTGTTCACCGTGGATATGCCCAACACTGGAGAGCTGGTGGAGATATCCGACTCTGACTCGGAGAACGAGTCCGATCCGAGTGGGGGGCGCCGCGTGAAGAAGGGCGCGACCCGCAAGTGGGGCGGCCCCACCCTGCCGAAGGAGGAGCAGCAGTTCCTGCTGGATAACCTTGAGGAGGTTTTCGCATCGACGTGGAGCAGGCACCGGGTGCACGACCAGTTACGACTGTGCGAAGATAAGCTTCACGCTCAAGTCGATGCTCTCCAAGCCGAGTCCCGAGAGCTGGGCAAGCTGATAGACGCGGAGCAGACCGCACTGGACGTTATGAGGAAGACCCTGTACGAGACCTTCAAGCCAGTGACCGAGTGCCGCACCGAACTCATCATTTCCGACAACGGAGACAAACAGATTGAAGTGAACCTGATGGTGGAACGCAGGTCAGCGAGGATCAGCAAGAAGCAGGCTCAGTACTTGGACGAGGATATGTTCAAGGACCAACCGCTGCCAACGGCAGACAGTGTGGAGGTGGACGACCCCAATGCTGTCACTGAAGTCAATCCGGAAaCTCTGCCCCCAGAAGGCCTGCTGCCAGAGCAGCCGCTGCAGGTGGGAGACACTGTATACGCCGTGAAGCAGTCCATCTTCGGGGCGTGGTGTCCCGCAAAGATCGTGCAGGTCTTGCCCAAGGGGACTCCCTTGGCCAACGGGACGCTGTCTCTGTTCTCACTTGTTCGTGTGAGGTTCGTGCAGGGTGCGGAAGGGGGTCGCGCGGCCAAGCAGGTCACCGGGAGACAGGTGGCCTACCCTGAACCCGCTGATGTTAGATATCCCATCGGTACTCGTATCATCGCCCTGTTCAAGGACAAGAAGCAATTGAAGGAGGCCTACTACTCCGGGGTCATCGCAGAGGTGCCCATCAAAACCAACTTCTATAGATACCTGGTATTTTTCGACGACGGTTACGCCCGCTACGTGTCGCACAAGAGCGCTCTGCTCGTGTGCGAGCGTTCGTTGCGCGTCTGGGAGGACGTGCACCCTGACTCGCGCGACTTTGTGCGCAAGTACCTACAGGGCTTCCCCAACCAGCCCATGGTGCGGGTACAGCTGGGCCACTCCATTCGTGCCGAGTACAACGGCAAGTTTTGGTTTGCCCACGTGATGTCCGTGGACGCGTCACTCGCACTTATCCGATTCTCGGAGGTGAGCGGAGCCCCCATCACCCGGGAGGAGTGGATCTACCGGGGCAGCACGCGGTTGGAGCCCCTCTTCCTGGAGCTGCAGGCAGCTGACAGAAGGGCGCACGGCCGACACAGGGCCACTTACGCTACAACGCATCCCGCCAAGAATAAGAACTTCCCGTACGTGGAATACTCCAGGCCTGACCAACCCGAGGATCAGCAGCAACAGCAGACGGATGAAAAGGAGAACCAGGCAAGCATTcgagattatatttctttAGTTGCCGTCACTGCCGACTCTGATGACAGTGATTTTAGTGTCGATTCTGACGATGAGGAACCAGATGTGTCGAACGTTCCCGGGTTTGATGAAtcggcaccagtttttgaaTGGAAAACGGATGACTTTATTCCCATTGTCAACTCGTTCTCTAGCTCAAAATCAGGAGCGGATGTAGAGAGTGTTGGTACCAGAGAAGAGGCGACCAAAGTGGAAGAGGAAAATGTTCAACAGGCGGCCGTGAGCCGTGCCGTGGCCAAGAAGAGCACCAGCGTTCCGGCTCCCGCCCCCCCTGTCAAGGAGGATCCGCCTCGCGCCAAGGAGCGCGAACAGCAACCCCCTGCCCAGCAACTGCACGCTGATCAGGTCAAGAGCAAAGTGGTGTACTACTCGCCCAAGGTGTCGATCAAGCCCAAGAAGATGGTGCCGCACACGTGCGGGTCCGACTGCTTGAACCGGGTCGCGATCCCGCTCAGGGAGTTGAGAACGTACAATCCTCTCGCACGACCACTGCTCTCCGGGTGGCAGAGGTTGATCCTGAAGTACCGGGGCAAGCGCAGCATCATGTACCTGTCGCCGTGCGGGCGCCGTCTGCGCTCCTCGCAAGAGCTGCACCTGTACCTGCGCCTCACGCACTCCCAGATGAGCGTGGACTTGTTCGACTTCGATCACTGGGTGCATTGCCTGGCTGAGTTCGTTCCCACAAAGTGCTTTGTCAGCAAGAAGGATCTATCCCACGGCGTGGAAGCCGTTCCGGTGCCGTGCGTGAACTACTACGATCATACACTGCCGGAGTTCAGCGCGTACAGCACCCGGCGCATCCCCACTCAGGGGGTGCACCTCAACCTGGACGAGGAGTTCCTTTGCGGCTGTGACTGTACTGATGACTGCCAGGACAGGAACAAGTGTCAGTGCTGGCAGCTGACCCTGGAGGGCGCGGAGCTGGTGGGCTGCCAAAGGGACAGGGTGGGGTACCAGTACAAGAGACTGTTGGAGCCCGTGCCCACCGGCATCTACGAGTGCAACTCCAGATGTAAATGTGCGGCCACGTGCCTCAATAGGGTGGTGCAGCATCCTCTACAACTCAAGCTACAGGTGTTCAAGACCTTCAACCGGGGATGGGGAATCCGAGCATTGAACGACGTGTCCAGGGGTACTTTCCTCTGCATCTATGCTGGGAATCTGTTGACTGATGCGGTCGCTAATGTTGACGGCGTGACGGAAGGAGACGAGTACCTGGCGGAGCTGGACTACATCGAGGTGGTGGAGAAGCTGAAGGAGAACTACGAGTCGGACGTGCCTGAGGAAGACAAAGACTTTGATGAAAAGTCTGATGGGTCTGATGGAGAGGGCAAGGCTGCGCCGATGCACCGGGACGGTAAGACTGGCGCCCACGGAGAGTCCGACGAGGAGTTCCAGCCCACCACCTACATTCCCAAGGGGAAACCAAGCGACAGTGACGATACTCGTATGACCACGAGACGCCAGCTGAGGAAAAAGCGCGGGGAAAAGGATGGAGACAAGGAGAAAGAGAAAGAAAAGGAAATGGAAAGGAGGGAGAAGGAGAGGAAAGAGGAGAAAGAGAAGGAGCAGGAGAAGAAGGAGAAAGAGAGGCGAGAGGAGAGGCAGAGTAAGGACTCGGACTGTATAGAGGGGGTGGCGCCTGTCGTAGACGAGTTCATCACCATTAGCGATGACGAAGAGAACATGCGAGAACCGTCACGTTTTGCCGCTCCTGAGGGACTTAATGACGATGAATATGTGCCCAAACACAGATCAGTGCGTGGCTTCTTCGGCAAGGACGAGGCCTGCTACATCATGGACGCCAAAGTGCAGGGCAACCTAGGCAGATACCTCAATGTGAGTACACCACATTAA
Protein Sequence
MASNNDQDLSKESMDIDDLSLEASMEDSAEKTGKVVETSDKVETENDIENALLNDSSDGESTFLGFKLDFDSPEKPKINTESNKECKTVEDLKTIESKTVDDLKTLESKTDESVETVDDLKTLESKTDESVETVDDLKTLESKTDESLETVDDLKTLESKTDEIVKTVDLKTLESKTDEILKAVDDLKTLESKPDEILETVDDPKTSEDQIESKLKESSIKERLETDDSSRDDKGKEERSGVEKCLSIEKTVEEEFRIDDRSPERIPEKESTRNEKLDTVEEKQLLSDSSVIEGETSASISNVTEYFSKIEDELLKSNDFDRIINEFSSSLSKGDAVSEVSSRIDNISNEFDDDDTSFSGSNSAVQKIIASKFADIEQTISDITADLGSDGNKNVQSDEEDGESSTSEAKEDSNDNMSTEEVLKDNSKEKAEVDEDISGDDGSKDGVQTEKEGGEHGKSKKSSALAEIKAKNDQQMVDLEDASMDGAHETDALGLLAEAEGRERHSSDPDDDDEEDDDVTSERDSMESHNYASEREESADDPDEMTEPSDEDYDPIAEDDLDEDDDIDEEDEDGLNFRGNFRGTSRGGQKRRRSVVDPPPDMRTENEYSMQIEEETSQGNAELQNNSELNEDTANQDLLPNDDMELDDTVGQNILSICNVTSLSVDQNGVEQSLEEAENDLERNDEEEAENDLERNDEEEAENDLERNDEEEAENDLERNDEEEAEANLVITSFGTADEEILKKLNETVDDKAEIGKKSDEIDSNDAEVTTPTATDEQINVGASEGVVESPKDKTDTETSADDTADLMNVSQEEEIQNLWDSIMEGDSNKEISNKRKADDSLEKARKKLDTKQVSEEVDDDVLTFARDHGKVFPAVEDAQDHSDKPDDLSTTLDRLTQVLEKSPESPVPEESVEKTVQPDKVLLIKEEKDADAYVETPSKDLYMSIGLTVKVEKPDEAQPVATVDTACQPAAPSSMDLDIPAEVNIKVEPAPSEKKTVETEPSQAVETEPVPDVKETAIPADTVPVVAVAEPSLEPALVPEKPVESSEPPEKLDVAVPSEKPLPKSEKPIADVVTTPAASKIDEVVTKLATKPVSEVFSLDSDDEDEAAKASPVQVSQQEAIKKLDDPSPTKKDLSPRSRDQVAVKGDRGKCVNPACVSAAAPHPCPLFLPSLYRARDLTKAPLACKECLDRGVALMELLTSRLRAGVCLFTVDMPNTGELVEISDSDSENESDPSGGRRVKKGATRKWGGPTLPKEEQQFLLDNLEEVFASTWSRHRVHDQLRLCEDKLHAQVDALQAESRELGKLIDAEQTALDVMRKTLYETFKPVTECRTELIISDNGDKQIEVNLMVERRSARISKKQAQYLDEDMFKDQPLPTADSVEVDDPNAVTEVNPETLPPEGLLPEQPLQVGDTVYAVKQSIFGAWCPAKIVQVLPKGTPLANGTLSLFSLVRVRFVQGAEGGRAAKQVTGRQVAYPEPADVRYPIGTRIIALFKDKKQLKEAYYSGVIAEVPIKTNFYRYLVFFDDGYARYVSHKSALLVCERSLRVWEDVHPDSRDFVRKYLQGFPNQPMVRVQLGHSIRAEYNGKFWFAHVMSVDASLALIRFSEVSGAPITREEWIYRGSTRLEPLFLELQAADRRAHGRHRATYATTHPAKNKNFPYVEYSRPDQPEDQQQQQTDEKENQASIRDYISLVAVTADSDDSDFSVDSDDEEPDVSNVPGFDESAPVFEWKTDDFIPIVNSFSSSKSGADVESVGTREEATKVEEENVQQAAVSRAVAKKSTSVPAPAPPVKEDPPRAKEREQQPPAQQLHADQVKSKVVYYSPKVSIKPKKMVPHTCGSDCLNRVAIPLRELRTYNPLARPLLSGWQRLILKYRGKRSIMYLSPCGRRLRSSQELHLYLRLTHSQMSVDLFDFDHWVHCLAEFVPTKCFVSKKDLSHGVEAVPVPCVNYYDHTLPEFSAYSTRRIPTQGVHLNLDEEFLCGCDCTDDCQDRNKCQCWQLTLEGAELVGCQRDRVGYQYKRLLEPVPTGIYECNSRCKCAATCLNRVVQHPLQLKLQVFKTFNRGWGIRALNDVSRGTFLCIYAGNLLTDAVANVDGVTEGDEYLAELDYIEVVEKLKENYESDVPEEDKDFDEKSDGSDGEGKAAPMHRDGKTGAHGESDEEFQPTTYIPKGKPSDSDDTRMTTRRQLRKKRGEKDGDKEKEKEKEMERREKERKEEKEKEQEKKEKERREERQSKDSDCIEGVAPVVDEFITISDDEENMREPSRFAAPEGLNDDEYVPKHRSVRGFFGKDEACYIMDAKVQGNLGRYLNVSTPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-