Basic Information

Insect: Ochropleura plecta
Gene Symbol: Kr
Assembly: GCA_905475445.1
Location: FR997751.1:749777-773748[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 6.5e-05 0.0078 17.9 3.5 1 23 282 304 282 304 0.98

2 11 0.12 15 7.6 1.4 1 23 311 333 311 333 0.97

3 11 0.098 12 7.9 0.1 1 23 337 360 337 360 0.97

4 11 0.036 4.3 9.2 6.9 1 23 367 389 367 390 0.96

5 11 1.5e-06 0.00018 23.0 0.4 2 23 396 417 396 417 0.98

6 11 0.00012 0.014 17.0 4.7 1 23 423 445 423 445 0.99

7 11 0.00037 0.045 15.5 1.8 1 22 451 472 451 476 0.93

8 11 0.044 5.3 9.0 0.0 1 23 484 507 484 507 0.93

9 11 0.0033 0.39 12.5 0.4 1 23 513 536 513 536 0.92

10 11 3.8e-06 0.00045 21.8 1.0 1 23 545 567 545 567 0.98

11 11 2.9e-05 0.0035 18.9 0.4 1 23 573 596 573 596 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	6.5e-05	0.0078	17.9	3.5	1	23	282	304	282	304	0.98
2	11	0.12	15	7.6	1.4	1	23	311	333	311	333	0.97
3	11	0.098	12	7.9	0.1	1	23	337	360	337	360	0.97
4	11	0.036	4.3	9.2	6.9	1	23	367	389	367	390	0.96
5	11	1.5e-06	0.00018	23.0	0.4	2	23	396	417	396	417	0.98
6	11	0.00012	0.014	17.0	4.7	1	23	423	445	423	445	0.99
7	11	0.00037	0.045	15.5	1.8	1	22	451	472	451	476	0.93
8	11	0.044	5.3	9.0	0.0	1	23	484	507	484	507	0.93
9	11	0.0033	0.39	12.5	0.4	1	23	513	536	513	536	0.92
10	11	3.8e-06	0.00045	21.8	1.0	1	23	545	567	545	567	0.98
11	11	2.9e-05	0.0035	18.9	0.4	1	23	573	596	573	596	0.96

Sequence Information

Coding Sequence: atggAAACAATGAATTTACACACCGAGGAAGATATTAAACTTGATTTTGAGCCGGCGAAACCTATTTGCAGGTGTTGTTTAACAATAGAAAGACGAATGTATAATGCAGGAATGTTTGAAGCGTATTTTAAAGACCTAGCCGGTATAAACGTAACAGAATCTGATGGCTTACCACAGTGGTTGTGTTACGAATGCGCTACTCTGCTTCAGAAGTCCGTTAAGTTCAAGTATAAGGTACTGCGTGCTCACACAATGCTGTATGAGTACCTTACACGATGTGCTCCTTTCCCGATTGAGGCACAAGATGAAGAGTTATCCAAATATGCTAGTCCCCATCTCAGTACCACCAGTGTGTTGACCATAGACATTGTTGGTAAAGGGAAGACTGGATATCATCAGGTTTTAGAGCATGAGAAGCAAGTCCAGTCTTCAGGTTTAGATGATATAGACATTCAAATGATTACTAAAATGGAAGACGACAACGTGAAGGAAGAGAACGGGTTCTCCGACTATGAAGACAATATTACTTTAGAAGAAATTAGGTCAGTTACAAAAATTACAGAGGACGATATAGCTTCGCTTTTACAAGAGGCTGGACATGTGGACATTAAAGAGGAACCAATCGTCGTAAAGAAGAGAAGACCGAAAACTAAAGAAGTAAaagttaaaaagaagaaaaaggaaacTGAAACAGCTCTTGAAGATGGCTCTGAATTAGAAACTAAGTCTTCAATAAGAAAACCTATTGAACTAGATCCAACGAAGATTAGAATCGTTACCCTGAATCCTGAGGAACAAATCAAACAAAGAGAGgaagaAAGTAAAGCTGGTTTGAAGTTCCCGTTCCAATGTAACTTGTGCCATAAAGGGTTTAATTTTGAGTCGAAATTACAAAATCATATGGGGAAGCACAGTCCGTCGCGCGGCCCGTACGAGTGCAAGCTGTGCCGCATGCACCTACCCACGTCGTACAGCTACAACGTGCACTCACTCATACACAACAGACGCTACGAGTGCGTCGCGTGCGGCCGACGGATGATCGATCGGTCCTCCATTATAGATCATTATAGAACACAACATGAGGGCTTCTTGACATTATTTACTTGTCATATATGTGGGAAAGTTTCTAAtaacaaTAAAACTCATAGAGGTCATATGCGGAACCATCACAGCGGGGACAGACCGAAATGTGAGCAGTGTGGGAAGTCATTCATTAATAAAGACTCCTTAGTCGAACATCAGCAGATCCACCAAGGCATCAAGAACTACGAGTGTGCAACATGCAACAAGCGCTTCAGAACGAGGACAcaaataaaacatcatcagctCACACACACGGATGTCAAGGATTACTACTGCGTCGAATGTGATGTAAGattCAAATCAGCGCACAGTCTTAGGCAGCATCTGCAAAAGAGTCTAAAACATAGAGATAAGCAGAGTTTGAAGTTCCCCTGCCCGCGCTGCCCGGCGCGCTTCGCGGGCGCGCGCGCGCTCAGCGCGCACAGCAGCGTGCAGCACGACGGCGTGCGCGCGCACGTGTGCGGGGAGTGCGGCGCCGCGCTGGCCACGCGCTCGTCGCTCAGCAAGCACCGCCACGCCGTGCACCGCGGCctgcgcccgccgccgcgccacGTGTGCGACACGTGCGGGAAGGCCTTCCGGGGTAAGAGCGTGTTAACAAACCACGTGCGCACGCACACGGGTGAGAAGCCGTTCGAATGCGGCGAGTGCGGGCGCAGGTTTACGCAGAGGACAGCCATGCGGACGCACGTCAAACTGGTACATCTGAAGCTTAGGAGAACTGCTAAGGTGAAACCAGAGGTGCCGCTAGAGGTGCAGTCCCCGAAACTGGATGTGTTCAAACCGGAGCCGCTACTGGAGCCCTGGAGACAGCCTTGTGACGTGTACTTCCAAGTCACCGCGGGACCCTGA
Protein Sequence: METMNLHTEEDIKLDFEPAKPICRCCLTIERRMYNAGMFEAYFKDLAGINVTESDGLPQWLCYECATLLQKSVKFKYKVLRAHTMLYEYLTRCAPFPIEAQDEELSKYASPHLSTTSVLTIDIVGKGKTGYHQVLEHEKQVQSSGLDDIDIQMITKMEDDNVKEENGFSDYEDNITLEEIRSVTKITEDDIASLLQEAGHVDIKEEPIVVKKRRPKTKEVKVKKKKKETETALEDGSELETKSSIRKPIELDPTKIRIVTLNPEEQIKQREEESKAGLKFPFQCNLCHKGFNFESKLQNHMGKHSPSRGPYECKLCRMHLPTSYSYNVHSLIHNRRYECVACGRRMIDRSSIIDHYRTQHEGFLTLFTCHICGKVSNNNKTHRGHMRNHHSGDRPKCEQCGKSFINKDSLVEHQQIHQGIKNYECATCNKRFRTRTQIKHHQLTHTDVKDYYCVECDVRFKSAHSLRQHLQKSLKHRDKQSLKFPCPRCPARFAGARALSAHSSVQHDGVRAHVCGECGAALATRSSLSKHRHAVHRGLRPPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECGECGRRFTQRTAMRTHVKLVHLKLRRTAKVKPEVPLEVQSPKLDVFKPEPLLEPWRQPCDVYFQVTAGP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01533326;
90% Identity: iTF_00425742;
80% Identity: -