Ople037492.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997749.1:9039150-9046121[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00019 0.023 16.4 0.4 3 23 2 23 1 23 0.96 2 28 0.019 2.3 10.1 0.3 2 23 49 71 48 71 0.95 3 28 1.1 1.3e+02 4.5 1.1 2 23 94 115 93 115 0.95 4 28 3.1e-07 3.8e-05 25.2 1.7 1 23 119 142 119 142 0.96 5 28 0.14 17 7.3 0.4 3 21 149 167 148 168 0.93 6 28 0.99 1.2e+02 4.7 0.2 1 21 175 195 175 198 0.88 7 28 0.0067 0.8 11.5 1.6 1 23 205 228 205 228 0.97 8 28 3e-05 0.0036 18.9 0.7 1 23 233 255 233 255 0.96 9 28 2.7e-06 0.00032 22.2 1.1 1 20 261 280 261 283 0.94 10 28 0.0099 1.2 11.0 5.9 1 23 289 311 289 312 0.95 11 28 0.45 54 5.8 1.4 2 23 351 373 350 373 0.93 12 28 1.4 1.7e+02 4.2 7.1 1 23 451 473 451 473 0.97 13 28 0.52 62 5.6 3.0 1 21 477 497 477 500 0.95 14 28 0.9 1.1e+02 4.8 0.5 3 21 507 525 505 526 0.93 15 28 1.3 1.6e+02 4.3 3.1 3 23 534 556 532 556 0.87 16 28 0.0002 0.023 16.4 2.0 1 23 563 586 563 586 0.96 17 28 0.57 69 5.5 2.0 1 23 591 613 591 613 0.92 18 28 0.00021 0.025 16.3 2.0 3 23 667 688 666 688 0.98 19 28 3 3.6e+02 3.2 0.0 2 23 713 735 712 735 0.92 20 28 0.0018 0.21 13.3 0.2 2 23 759 780 758 780 0.96 21 28 0.0005 0.06 15.1 0.8 1 21 784 804 784 805 0.96 22 28 1.2 1.5e+02 4.4 0.1 1 23 846 869 846 869 0.94 23 28 3.6 4.3e+02 2.9 1.3 2 23 895 917 894 917 0.94 24 28 0.0026 0.31 12.8 0.6 2 23 941 962 940 962 0.95 25 28 0.00037 0.045 15.5 0.0 1 23 966 989 966 989 0.97 26 28 0.58 70 5.4 0.5 1 23 993 1016 993 1016 0.97 27 28 0.00056 0.068 14.9 1.9 1 23 1055 1078 1055 1078 0.96 28 28 0.0012 0.14 13.9 0.4 1 23 1088 1111 1088 1111 0.95
Sequence Information
- Coding Sequence
- ATGTGCGTATATTGTGGCGAAAGTTACAACGACGCCACACTATTTCGACAGCACATGAAGAAGGAACATTTCAACTTCAAAGTCAAAACAGCATTCGCTCACATTTCATACGAAAGCTACCTCAAAATTGACATCACAGAAATGACCTGCAGGATTTGCTTTGAAACCTTCCCAAGACTTGAAGAAATTGCACGACATTTAAAAGAGAGACATGCCGCCAAAATCAACTTTGACTTCCAATTAGGGTTGCATCCTTATAAATTCGCACAAGATAAGCTTATGTGTGGGATTTGTGATTTGAACTTCCCCTGTATGAGACAAGTTAGTCGTCACATGACAACTCACTACCAGAACTATACTTGTGATACTTGTGGCAAATCCTATACAACGAACAGCTCTTTGCAACAGCACATCAGATTTTCACACATAACAGCTGAAAGAATATGCAGAAAATGTAAAACAACGTTCAGTTCTTTAGCAGCAAAGAGGGAGCATATGATCAAATCTCCCAAGTGTTGGATGTATCAATGTTTGACATGTTTTGAAAGATTTATGACTTGGCCCGCTAAAGAACAGCACTTAGTTGACGCTCATGGGCAATCCAAAAAATCCTATTCCTGTTCCGAATGCAGTCTTATGTTTACAACTAGAAATGCGTATAGAGGGCATTTTAATACGACTCATGCTGAAGTTAACTTCCCTTGTACTTACTGCGGACGAAAATTTGCCTCCCAAAGATATCTTGAACAGCACAATCTGGTCCACACAGGAGAAAAAGCCTTTCAATGCAATGTGTGCTCTAAATCTTTTCCCAGAAAGAAGAATCTTACTCAGCACATGTGGGTTCACAGTGACTTTAAAAGGTTTGAATGCAGCGCGTGTAAAAAGCAGTTTAATCAAACCCATACTTTTAAGGCGCATATGAAAGGACATCATCCTGAACTTCCTGAAGAAAAATGGCAACAACCACATTTATGGGCGAAAGAGAATGCGGAGATTGTGTTGCGATATTCGACCGTATACCCATTCAGGTTGAGAGGAAAATCCATCACTTGCGTGTACTGCTGCGAAGGGTATGATGACCCCACGCATTTCAGAAGGCACATCGATGTTCAGCACAAGCAATTCACGGTCGCCACAGCCTTCCACCACATGAGCACCTTAAAAGAATATCTCAAATGCGACATCACCAACTTAAAATGCAGACTGTGTTACCATCCATGTGAAAAAATCGATGATTTCACAGACCATTTCAAAACCAAACATATTAAAACACATGCTGATGTTGTAAAGAAACTAAAACTTGAATATGATGTAGGTTTGCAACCTTATAGATTAGTGAACAACAATTATTGCTGCTATCACTGCGGGAAGAAGATGCCCACCCTTATCAAACTCTGCCGGCACACCATCTCGCATTACCAACGATACACATGCGATACTTGTGGACGAAACTATCTCTCTCACGAAGCATTAAAATACCACATTAAATGCATCCATGAGGTCACAAAACACCTATGCAGGAAATGCTGGACGGAATTCCCTACTTTAGAGAAGAAGAAAGCACATATTAGAGAATCGAAGCAATGCTGGACTTTCTGCTGCATTGTCTGCAGCGAAAGATTCCAATCTTGGGAGCATAAGCAGAAACATTTACAAGCGGAACATGGCTATGAGAAAATCGTCTACAACTGTCCGGACTGTGATGAAAAATTCACTTCAAGAAAGTACTTCTATACTCATTACAAGCTTGCTCACACTGATGAGGGCTTTCAATGTGCATGCTGCGGTCTCAAATTTAACACCCAGAAACGTTTGGAAGACCATTCACTTGGACACACGGggacCACATTGGAAATTCACGGACGTAGTGAGACTGagaatgaaacaaaaaagaaaattgtccTTGTTTACCAGACGCCCCAAAGGCGAAACGCTGAAATCATACTAACTTATTCCACCGCATACCCTTTTAAAACTCGTTTTAGTCAAATACTCTGTTCATACTGTCATGAAGAATTTAATACCCTCACTGATCTTAGATATCATATGAAAACAGAACATATTAACTctggttttaaaaatgttttctataGAGCAAGGgataatttaatcaaaatcgaTATTACTAATCTAGAATGTAAAATATGCTCAGAAGAAATCCAGGATGTCGATGGTCTTATGAGTCATTTATATAGGGAGCATAATAAGCCTGTAAAATTCAACGCTCGGTACGGTGTTCTACCTTATAAGCAGAATTCTGATAATCATTGGAGTTGTGTTTACTGTAACAAAATCTTCATCTCATTCATAGCTTTCAATCGGCATATTGTTACCCATTTTATGAATTATAGTTGTGACAAATGCGGAACAACATTCGTCTCTGATTACGCCTTGAAAGACCACCATCGGCAAGTCAAATGCTTTCGAACAGCTTATAAAGCTAGAAATGGAAGAGTCTTGAAACCTAGGTCTAATGCCGAGATTATTCTACAATGTTCCACAGCAAGTCCTTTCAGGACATGGAAAAGCAACTTTAATTGTGTATTCTGTAGGGTTCAAAGTAATGATCCAAGCGGTCTTCGAATGCATGTCGTCACAATTCATGCGAATTACGATGTTAAAGCTGCTTTTTACAAGAAATTAGGGAAAGATTTCCTAAACGTTGACATAACAGATCTCCAGTGTAAACTATGCTTCATGCATATAGACTCGTTCGACAGTTTAATTTACCATCTAAAGAATGATCATCAGCAACCGATAAACAGTGATGCACAAATAGGAGTCTTACCGTTTAGACTCAACGATGGGTCGATATGGAAATGCACGATATGTCCGAATGAATTCAAAGATTTCGTCTCTCTAAAGAAACATACTTCAGAACACTTTCAAAACTACGTTTGTGATACTTGTGGCGAAGGTTTTATCACAGAATCTGCTATGATAGCCCACACTAAAATACCACACGAGAATAAATATAACTGCAGTCGATGTATTGCCACGTTCTCTTCGTTAGATGAAAGAAATGTTCATGTGAAAACACAACATACATCACTACCTTACGTCTGTGTCTATTGCAAAGATAAACCGCGCTTCGCAAACTGGGAGGTTCGCAAAAAACATTTGATGGcggtacataattataaaacaggAGCTGATAAATATGATTGTACGACGTGCCAAAAGTCTTTCAAGACGAGATCGGGGAAATACAATCATATGGCGCGAGTacatcgaataaaaaaagacacTGAGCTCAGCTATCCATGTCCAAGCTGTCCAAAGGCGTTTACGACTAAACTCTTCTTGGATAAACATGTGGCTAAAAAGCATTTTGATGTTTGA
- Protein Sequence
- MCVYCGESYNDATLFRQHMKKEHFNFKVKTAFAHISYESYLKIDITEMTCRICFETFPRLEEIARHLKERHAAKINFDFQLGLHPYKFAQDKLMCGICDLNFPCMRQVSRHMTTHYQNYTCDTCGKSYTTNSSLQQHIRFSHITAERICRKCKTTFSSLAAKREHMIKSPKCWMYQCLTCFERFMTWPAKEQHLVDAHGQSKKSYSCSECSLMFTTRNAYRGHFNTTHAEVNFPCTYCGRKFASQRYLEQHNLVHTGEKAFQCNVCSKSFPRKKNLTQHMWVHSDFKRFECSACKKQFNQTHTFKAHMKGHHPELPEEKWQQPHLWAKENAEIVLRYSTVYPFRLRGKSITCVYCCEGYDDPTHFRRHIDVQHKQFTVATAFHHMSTLKEYLKCDITNLKCRLCYHPCEKIDDFTDHFKTKHIKTHADVVKKLKLEYDVGLQPYRLVNNNYCCYHCGKKMPTLIKLCRHTISHYQRYTCDTCGRNYLSHEALKYHIKCIHEVTKHLCRKCWTEFPTLEKKKAHIRESKQCWTFCCIVCSERFQSWEHKQKHLQAEHGYEKIVYNCPDCDEKFTSRKYFYTHYKLAHTDEGFQCACCGLKFNTQKRLEDHSLGHTGTTLEIHGRSETENETKKKIVLVYQTPQRRNAEIILTYSTAYPFKTRFSQILCSYCHEEFNTLTDLRYHMKTEHINSGFKNVFYRARDNLIKIDITNLECKICSEEIQDVDGLMSHLYREHNKPVKFNARYGVLPYKQNSDNHWSCVYCNKIFISFIAFNRHIVTHFMNYSCDKCGTTFVSDYALKDHHRQVKCFRTAYKARNGRVLKPRSNAEIILQCSTASPFRTWKSNFNCVFCRVQSNDPSGLRMHVVTIHANYDVKAAFYKKLGKDFLNVDITDLQCKLCFMHIDSFDSLIYHLKNDHQQPINSDAQIGVLPFRLNDGSIWKCTICPNEFKDFVSLKKHTSEHFQNYVCDTCGEGFITESAMIAHTKIPHENKYNCSRCIATFSSLDERNVHVKTQHTSLPYVCVYCKDKPRFANWEVRKKHLMAVHNYKTGADKYDCTTCQKSFKTRSGKYNHMARVHRIKKDTELSYPCPSCPKAFTTKLFLDKHVAKKHFDV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01532458;
- 90% Identity
- -
- 80% Identity
- -