Ople009952.2
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- PAXBP1
- Assembly
- GCA_905475445.1
- Location
- FR997725.1:4919215-4944212[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 3.7e-05 0.55 11.1 0.0 4 40 515 551 512 554 0.91 2 10 4.2e-05 0.62 10.9 0.0 4 40 558 594 555 597 0.90 3 10 4.2e-05 0.62 10.9 0.0 4 40 601 637 598 640 0.90 4 10 4.2e-05 0.62 10.9 0.0 4 40 644 680 641 683 0.90 5 10 4.2e-05 0.62 10.9 0.0 4 40 687 723 684 726 0.90 6 10 4.2e-05 0.62 10.9 0.0 4 40 730 766 727 769 0.90 7 10 4.2e-05 0.62 10.9 0.0 4 40 773 809 770 812 0.90 8 10 4.2e-05 0.62 10.9 0.0 4 40 816 852 813 855 0.90 9 10 4.2e-05 0.62 10.9 0.0 4 40 859 895 856 898 0.90 10 10 7.6e-15 1.1e-10 42.9 0.0 4 190 902 1067 899 1074 0.75
Sequence Information
- Coding Sequence
- ATGTCATTGTTTCGAAAGCCAAAGAAGATTCAGCGTCGGGTATTTTGTGCTGATGATGACGAGGATGGAGAGCCTGAGGCGCCTCCGCCGCCAGTCATCAGCCAAGAACGGGAGAAGAAGAAACCTGCTCTGTTGAGTTTCGCTGACGAAGAAGAAGAAGTGGAGGTCTTCAAAGTCAAGAAGTCCTCTCAAAGTAAGAGATTAGCAAAGAAGCGTGAGAAAGAGAAGCAGAAACGTGATGTGAGAACCGATGGTGATAATAACAAATATGACACTATCGTAATTGAGGAAAACGACACAGACATCGTGAACGACAAACCAAAACCAAAGAAGAAGGTGTCACTAGAGGGGCTGATCCTGTCCGGTCGGGAGGCGTTAGCGGCCGACGGGGCGGGTGATGTGTCCGACGATAGTGGGCCCGAAGAGGAGGACACAGAGGGGGACGACAGGGGGTTCCACCGGTACCGCGCCGAGTCCGTGAGGGCCGCGCTGTTGGGCGCACCCGGCCGCATTCCCGACGCAGCGCTCATTCACGCCGCACGCAAGACCAGACAGCAGGCTCGCGAAttgggcggcggcggcgccggcgctgATTATATTCCCGTGAAGTCTGAGTCCGCCCCGGGATCCCGTCTAATTCGGGATGATGGGTCTGGAGATGATGAGGAGGAAGGGCGGATCCATGTCCGGGGACTGGACTTGCCTAGTGATAAGCCTAAACGTGGCACAGCAGCAGTGTCCGAGGAAGAGTTGGACAGCGAATCGGAAGATTGGGTGGAACAGCAGCTGCAGAAGGCGCGGCCCGTCCTCGCGGATCTGACTGGTGAAGCGCCAATAGAAGTGAATCCTTTCTCGGTGGCCTTGCCGCCGCCACAGATATCGGCTCCCGAACACTTGCGACCTCTCACTACCGGCACACAGCCTCCTGCGACTGCCAACGAGCTGGTGGAGGCGTTGAAGAAACGGTTAGGAGAACTCCAAGTAGAACGCAAAGAAACTTCAGAGACACAGCAGGAACTTCGCGAGAGGTTGCTCACTTCGGCAAGAATACGAGAGAGTCGGGCGTCGCGCTGTGGGGAGTTAGACGCGGCTTATAGGAGGGCGCAGGCCATACGAGGCTACCTTACAGACCTTATTGAGTGCCTTGATGAGAAGATGCCACAACTAGAAGCGTTGGAAGCTCGTGCGTTGGCGTTACATAAACGTCGCTGCGAGTTCCTCATCGAGAGACGAAGAGCCGACCTGCGGGACCAGGCACAAGATGTTCTTGCTCCACCTGGGCGGGCTACAAAACCAGCCGATAACGAGGAGAAGACGCGTCGTGCAGCCGAGCGCGAGGGACGACGTCGCGCCCGACGACTCAAGCGCGAGGCCACGGCCGCCGCAGCCGGGACCGCGCTGCCGCATCGGGACGGAGACTCCTCGGATGATGAGCTGCCTCCGCATGAGATGCACCATTATACACAGGAGAGAGACGCTATCCGTCAACAATCAGCGTCGTTGTTCAGCGACGCGCTGCCCGCGTGGCGCAGCGTGGCGGGCGTGTGCTCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGGTAAGTAACAGCGTGGCGGGCGTGTGCGCGCGTCTAGCGCGCTGGCGGGCCCGCGCCGCCGACCTGTACACGGACGCCTACGTCGCCGACTGCCTGCCCAAGCTACTGGCGCCCTATGTCCGACATGAGCTAATACTATGGAACCCGCTGGCAGATGAAGACAACGAAGATTACGAGAGAATGGATTGGTACAAATGTCTGATGATGTACGGCGTTCGTACTGAGCGTGGAGCAGACTCATCCTCTTCGGCGTCGGAGAGCGAGGTGGAGCCGCTGCCGGTCACGGAAAGCACCGTGCGAGAGGACCCTGACCTGCTGCTGGTGCCCAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGAGTTGGTGTCGGTGGCGTGGGACCCGATGTCGGTCCGCTCGTGCACGCGCCTGCGCTCGCTCGTGCTGCGCGCGGCCGGCCTGCCCACGTGCGGCGCGGCGCTGCGGCGCGTGGCGGCCGCGCTGCAGGCGAGGCTCGCGGCTGCGCTGGGCGCTGATGTCTTCCTGCCCGCGATACCGCCGCAGGTGATGGAAGGTCCAGGCGGAGCGTTCTGGCGTCGCTGCTTAGGCGCGGGAGTACGGTTACTGCGCGCTACGCTCTCGCTCACCGGTCCGCCTGCTCTGTTGTATGCTGACCCACTTGTAATGTCGCTTATAGAAACCCTGTCGATGGGCGCGGGCGCAGCGGGCGGGCCGCACGtggcggcggcgggcgcggcgctggCGGCCACGCTGCCGCGCGCCGGCGCGCTGCGCAAGCGAGCACTCGCGCGGCTGTGCGCGCTCGCGCAGCTCGCGCTGTCCAGGCTTGACACTGATAATCCTATGCATttGAAAGCTCTAGAACAAGCAAGAGCAGTGATCGCAGAAGCACGCGCGGTTGAATGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDEDGEPEAPPPPVISQEREKKKPALLSFADEEEEVEVFKVKKSSQSKRLAKKREKEKQKRDVRTDGDNNKYDTIVIEENDTDIVNDKPKPKKKVSLEGLILSGREALAADGAGDVSDDSGPEEEDTEGDDRGFHRYRAESVRAALLGAPGRIPDAALIHAARKTRQQARELGGGGAGADYIPVKSESAPGSRLIRDDGSGDDEEEGRIHVRGLDLPSDKPKRGTAAVSEEELDSESEDWVEQQLQKARPVLADLTGEAPIEVNPFSVALPPPQISAPEHLRPLTTGTQPPATANELVEALKKRLGELQVERKETSETQQELRERLLTSARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLIERRRADLRDQAQDVLAPPGRATKPADNEEKTRRAAEREGRRRARRLKREATAAAAGTALPHRDGDSSDDELPPHEMHHYTQERDAIRQQSASLFSDALPAWRSVAGVCSRLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHEVSNSVAGVCARLARWRARAADLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTERGADSSSSASESEVEPLPVTESTVREDPDLLLVPSIISRVVLPCLTELVSVAWDPMSVRSCTRLRSLVLRAAGLPTCGAALRRVAAALQARLAAALGADVFLPAIPPQVMEGPGGAFWRRCLGAGVRLLRATLSLTGPPALLYADPLVMSLIETLSMGAGAAGGPHVAAAGAALAATLPRAGALRKRALARLCALAQLALSRLDTDNPMHLKALEQARAVIAEARAVE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -