Ople022496.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997735.1:19205611-19207974[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 1.4e-07 32.3 0.0 2 43 11 53 10 55 0.84
Sequence Information
- Coding Sequence
- ATGCCAAAGGTGCCTAAATTAAAATACTCTCAAGAAAACCTTCAGAAGGCAATAGCTGAAGTTCAAAATAATGAACAGCAATTGTCAGATCGCCAAATTTCTCAAAAGTACGGTATCCCGAGGTCAACACTTCGCTTTTACAAACGTAACCCGGGCCATAAAACCAGTCTGGGCCCATCTCCAATTTTGACTCCAAGCGAAGAATCGATTATTGAAGATTGGTTAATTACATCTGCTCGAAAAGGTTTTCCCAAAAACAAAGACAATGTGTTAGACAGCGTACAAAAATTCTTAGTCGATAACCCAAGACCAAATCCTTTTACCAATAACAGGCCTGGGATTGGATGGTGGAGGGCTTTTTTAAAGAGACACCCAAGGTTAAGCATCAGAACTTCGGAAGGAGTCACAAAAGCCAGTTCATGTGTTTCCGAAAAAGACATAAGGGGATGGTTTGATGAAATACGTTCATACGCTGAAGAAAAAGGTTTCATTGAGGTTCTCAGCCAACCCAGTAGAGTTTTCAATGCAGacgagacaaattttcaaatttgCCTAAGTTCAGGACTTGTTATAGCAGAGAAGGGCTCTAAAAATGTTTACAACATCGAACATTCTAACGCGAAAGAGTCTATTACGGCATTATTCACGTTCTCAGCTGCAGGTGACGTATGCTGCCCGTTTATTGTATATCCCTACCAGAGACTACCTGAAAAAATATGTGAATCCATACCAGAAGGATGGGGTATTGGAAAATCAGATAATGGTTGGATGACTACCGAAGTATTTTACGAATTTATAGCAAATGTTTTTCATCCCTACTTAGTAAGCAAATCTGTCGAATTTCCTGTCATTCTATATGTTGATGGccacaaaacacatttaaattatCATCTAAGCCAGCTATGTACGCATCTGCAAATAGAGTTGATAGCTTTGTACCCCAATGCTACAAGAATAATCCAGCCAGCTGACGTCTCTGCATTTAGACCTCTGAAAATGGGCTGGAGAAAGTATCTGAAGAAATGGCAactatcaaatcaaaataaaggGATAACAAAGTTAAATTTTGCTCCTATACTCTACGAAGTGGTTACAGCAAGTCTGAGGCCGGATATATTGATAAATGGTTTTAGAACGTGTGGTCTTTGCCCTTTTAATCCCGATTCCATAAATTACTCAAAGTGTTTAGGTAAAGATGTTGTTATTCAGCCAGAGTCTTCAAAGGGAATTCTCGACAATGCTACAATTACATACGAGACATTTCGGAATATAACAGGAGCCTCTCTTTGCACAAATTTTgaagataaatcatttaatacCACTGATAGGTACCTGGCTATAATTTATAAGCTCTGGAGAGGATTTCAAAATAATGGTCAAACTGCTGATACATCTGTTGGAACATTGGAAAATGAGTCTCAAACAAAGAGTTCCCAGTCTCTCGATTTTGTTGAAAATAGAGCTAAATCTCCAACTATTTTGAATCCAGATAGCAACAATCAAATTGCTGAAATATTAGGTGCAGAACAAGTTATATACCCAATTGAAGTCCCTCCAGCCGAAATAATCAGCATCCCTAGCACATCCAAAACTGAGCAAATCCCCTATTACTTACATAGTCTACCTGGAACAtctaattgtgaacaaaatatttttctggcTGATCACTCTGAAACTCAAAATCATTCAGAATTTCAGTCTGACCTCGTTACTCCAGACGCTACTACCCTTGAGAGTCCAAagttggtaaaaataaaatccgcTTTTGGAGAATATCTAGTATATCCAAAAACCCCAATAAGAAAAGGAAAACGACAAGTAGAGCGACAGCCGTTTGCTATCGCATCAGAAAAATTCAAATTAGCAGTAAAGAAAAAGCAGACAGATAAGGAAAATCAATTGAAAGAAAAAGAACAGAAAAAATTGGAGAGAGAAGTGAAGAAGAatgagaaaactaaaaaagaatgtaataaattacaaaacaaagataaattaaaaactcaAACAATAAGAAGAGAATCTCACGATGATATTGTTAATGATGTCCATGATAGTGGCAGTGTATTCCCAGAGTCGAAAAGAATCACTGTTTTAAAGGAAGTCCTGGTGAAGTCCAGTGATATATGTGCAATGTGCaaacacattattataaaaaacaaaatcgaaTGCAGTAGCTGTCACCAGTCGTTCCATTCACGATGTATTCCAGAACACCATAAAAGTAACATCCCTGATGATGCTGATATGTTGCTATTTTTGTGtcatttttgttataaaattaatgattCTGACGATGATACGAATTCTGATTGCGaagaattatatttaaatgttcaaAAGGCTCGAAGAGATCTCAatttttaa
- Protein Sequence
- MPKVPKLKYSQENLQKAIAEVQNNEQQLSDRQISQKYGIPRSTLRFYKRNPGHKTSLGPSPILTPSEESIIEDWLITSARKGFPKNKDNVLDSVQKFLVDNPRPNPFTNNRPGIGWWRAFLKRHPRLSIRTSEGVTKASSCVSEKDIRGWFDEIRSYAEEKGFIEVLSQPSRVFNADETNFQICLSSGLVIAEKGSKNVYNIEHSNAKESITALFTFSAAGDVCCPFIVYPYQRLPEKICESIPEGWGIGKSDNGWMTTEVFYEFIANVFHPYLVSKSVEFPVILYVDGHKTHLNYHLSQLCTHLQIELIALYPNATRIIQPADVSAFRPLKMGWRKYLKKWQLSNQNKGITKLNFAPILYEVVTASLRPDILINGFRTCGLCPFNPDSINYSKCLGKDVVIQPESSKGILDNATITYETFRNITGASLCTNFEDKSFNTTDRYLAIIYKLWRGFQNNGQTADTSVGTLENESQTKSSQSLDFVENRAKSPTILNPDSNNQIAEILGAEQVIYPIEVPPAEIISIPSTSKTEQIPYYLHSLPGTSNCEQNIFLADHSETQNHSEFQSDLVTPDATTLESPKLVKIKSAFGEYLVYPKTPIRKGKRQVERQPFAIASEKFKLAVKKKQTDKENQLKEKEQKKLEREVKKNEKTKKECNKLQNKDKLKTQTIRRESHDDIVNDVHDSGSVFPESKRITVLKEVLVKSSDICAMCKHIIIKNKIECSSCHQSFHSRCIPEHHKSNIPDDADMLLFLCHFCYKINDSDDDTNSDCEELYLNVQKARRDLNF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00952641; iTF_00850596; iTF_00850597; iTF_00850598; iTF_00850599; iTF_00850600; iTF_01085101; iTF_01084187; iTF_01527036;
- 90% Identity
- iTF_00952641; iTF_00850596; iTF_00850597; iTF_00850598; iTF_00850599; iTF_00850600; iTF_01085101; iTF_01084187; iTF_01527036;
- 80% Identity
- -