Mcon011488.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01004924.1:104059-106014[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-10 6.8e-08 32.7 0.0 2 43 8 50 7 52 0.84
Sequence Information
- Coding Sequence
- ATGCCTAAATTAAAATACTCTCAAGAAAACCTTCAGAAGGCAATAGCTGAAGTTCAAAATAATGAACAGCAATTGTCAGATCGCCAAATTTCTCAAAAGTACGGTATCCCGAGGTCAACACTTCGCTTTTACAAACGTAACCCGGGCCATAAAACCAGTCTGGGCCCATCTCCAATTTTGACTCCAAGCGAAGAATCGATTATTGAAGATTGGTTAATTACATCTGCTCGAAAAGGTTTTCCCAAAAACAAAGACAATGTGTTAGACAGCGTACAAAAATTCTTAGTCGATAACCCAAGACCAAATCCTTTTACCAATAACAGGCCTGGGATTGGATGGTGGAAGGCTTTTTTAAAGAGACACCCAAGGTTAAGCATCAGAACTTCGGAAGGAGTCACAAAAGCCAGTTCATGTGTTTCCGAAAAAGACATAAGGGGATGGTTTCATGAAATACGTTCATACGCTGAAGAAAAAGGTTTCATTGAGGTTCTTAGCCAACCCAGTAGAGTTTTCAATGCAGACGagacaaattttcaaatttgcCTAAGTTCAGGACTTGTTATAGCAGAGAAGGGctctaaaaatgtttacaacatCGAACATTCTAACGCGAAAGAGTCTATTACGGCATTATTCACGTTCTCAGCTGCAGGTGACGTATGCTGCCCGTTTATTGTATATCCCTACCAGAGACTAcctgaaaaaatatgtgaatcCATACCAGAAGGATGGGGTATTGGAAAATCAGATAATGGTTGGATGACTACCGAAGTATTTTACGAATTTATAgcaaatatttttcatccctACTTAGTAAGCAAATCTGTCGAATTTCCTGTCATTCTATATGTTGATGGCcacaaaacacatttaaattatcATCTAAGCCAGCTATGTACGCATCTGCAAATAGAGTTGATAGCTTTGTACCCCAATGCTACAAGAATAATCCAGCCAGCTGACGTCTCTGCATTTAGACCTCTGAAAATGGGCTGGAGAAAGTATCTGAAGAAATGGCAactatcaaatcaaaataaagggataacaaagttaaattttgCTCCTATACTCTACGAAGTGGTTACAGTAAGTCTGAGGCCGGATATATTGATAAATGGTTTTAGAACGTGTGGTCTTTGCCCTTTTAATCCCGATTCCATAAATTACTCGAAGTGTTTAGGTAAAGATGTTTTTATTCAGCCAGAGTCTTCAAAGGGAATTCTCGACAATGCTACAATTACATACGAGACATTCCGGAATATAACAGGAGCCTCTCTTTGCACAAATTTTGAAGATAAATCATTTAATACCACTGATAGGTACCtggctataatttataaactcTGGAGAGGATTTCAAAATAATGGTCGAACTGCTGATACATCTGTTGGAACATTGGAAAATGAGTCTCAAACAAAGAGTTCCCAGTCTCtcgattttgttgaaaatagAGCTAAATCTCCAACTATTTTGAATCCAGATAGCAACAATCAAATTGCTGAAATATTAGGTGCAGAACAAGTTATATACCCAATTGAAGTCCCTCCAGCCGAATTAATCAGCATCCCTAGCACATCCAAAACTGAGCAAATCCCCTATTACTTACATAGTCTACCTGGAACATGTAAttgtgaacaaaatatttttctggcTGATCACTCTGAAACTCAAAATCATTTAGAATTTCAGTCTGACCTCGTTACTCCAGACGCTACTACCCTTGAGAGTCCAaagttggtaaaaataaaatccgctTTTGGAGAATATCTAGTATATCCAAAAACCCCAATAAGAAAAGGAAAACGACAAGTAGAGCGACAGCCGTTTGCTATCGCATCAGAAAAATTCAAATTAGCAGTAAAGAAAAAGCAGACAGATAAGGAAAAtcaattgaaagaaaaagaacagaaaaaattGGAGAGAGAAGTGAAGAAGAAtgagaaaagtaaaaaataa
- Protein Sequence
- MPKLKYSQENLQKAIAEVQNNEQQLSDRQISQKYGIPRSTLRFYKRNPGHKTSLGPSPILTPSEESIIEDWLITSARKGFPKNKDNVLDSVQKFLVDNPRPNPFTNNRPGIGWWKAFLKRHPRLSIRTSEGVTKASSCVSEKDIRGWFHEIRSYAEEKGFIEVLSQPSRVFNADETNFQICLSSGLVIAEKGSKNVYNIEHSNAKESITALFTFSAAGDVCCPFIVYPYQRLPEKICESIPEGWGIGKSDNGWMTTEVFYEFIANIFHPYLVSKSVEFPVILYVDGHKTHLNYHLSQLCTHLQIELIALYPNATRIIQPADVSAFRPLKMGWRKYLKKWQLSNQNKGITKLNFAPILYEVVTVSLRPDILINGFRTCGLCPFNPDSINYSKCLGKDVFIQPESSKGILDNATITYETFRNITGASLCTNFEDKSFNTTDRYLAIIYKLWRGFQNNGRTADTSVGTLENESQTKSSQSLDFVENRAKSPTILNPDSNNQIAEILGAEQVIYPIEVPPAELISIPSTSKTEQIPYYLHSLPGTCNCEQNIFLADHSETQNHLEFQSDLVTPDATTLESPKLVKIKSAFGEYLVYPKTPIRKGKRQVERQPFAIASEKFKLAVKKKQTDKENQLKEKEQKKLEREVKKNEKSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01085100;
- 90% Identity
- iTF_01085100;
- 80% Identity
- -