Ople007516.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997724.1:11842719-11843525[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-10 9.6e-08 32.9 0.1 4 42 7 44 4 46 0.93
Sequence Information
- Coding Sequence
- ATGACTGACAAACAGAAGGCCATATTAAAGGCCATGGAGGCAGTTAGAAAAGGAGCCTCAATTTCAGCCGCAGCCAGGCAGTACAATATTCCACGGTCAACTTTGGACGACAAAATACGCGGCCGCTATTCTATTGAATGTTCCAAAGGACCTGCTACAGTTTTGTCAAAAGAAGAAGAGGATCATTTAAGAAGATGGTTAATTTTTATGGCAGATAGTGGATTTCCTGTAACTAAGGCGCAGTTGCTGGATAGTGTAagtttacttattaaaaaattgaAGCGAGAAAACCCTTTTAAAAATGGCAGACCAGGTCGTCACTGGTTTGAAGCCTTCATAAAGCGGCACCCTGAAGTAGGCCAGCGAGTGGGCCAAAATCTTACGCAAACCCGTGCTTTAGTTCAGGAAAGCAATTTAAGAGCGTGGTTTAAAGAAGTGGAAGACTATTTTATTACGGCACACCTCGAAGAAGCCATTAAAGATCCACGAAGGATATTTAACTGTGATGAAAGCGCTTTCTTTTTGTCACCAACAGATAATAGAGTTTTAGCAAAACGAGGTGCCAAAAATGTTTATAACATTATTCCCAGTAGTGAAAAAGAGTGCGTGACAGTCTTAGTCACAGCAAATGCAGCAGGTGAATTGGCACCTCCAATGGTGTTGTTTAAACTGAAATCAATaccatttaaaatttcaaaaagtGCACCAAAGGACTGGGGCTTAGGATTTACGCCAAAAGGTTGGATGACAGGGGAATCATTTTATGAGTACATGACAAATCGACGTCCCCGGGGAATAAACCGGTAA
- Protein Sequence
- MTDKQKAILKAMEAVRKGASISAAARQYNIPRSTLDDKIRGRYSIECSKGPATVLSKEEEDHLRRWLIFMADSGFPVTKAQLLDSVSLLIKKLKRENPFKNGRPGRHWFEAFIKRHPEVGQRVGQNLTQTRALVQESNLRAWFKEVEDYFITAHLEEAIKDPRRIFNCDESAFFLSPTDNRVLAKRGAKNVYNIIPSSEKECVTVLVTANAAGELAPPMVLFKLKSIPFKISKSAPKDWGLGFTPKGWMTGESFYEYMTNRRPRGINR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01026015;
- 90% Identity
- iTF_01085096; iTF_01026088; iTF_01025996; iTF_01025997; iTF_01025992; iTF_01025998; iTF_01025999; iTF_01026000; iTF_01026001; iTF_01026002; iTF_01026015; iTF_01026003;
- 80% Identity
- -