Ople001835.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997722.1:1544508-1545263[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-13 7.3e-11 42.9 0.0 1 38 15 53 15 59 0.90
Sequence Information
- Coding Sequence
- ATGGTTCGTGACTACAAACGCACGACTGACAGAGGGTCGTGGTCCGAAGAATCCATGCGGGAAGCAATTCAAGCGGTTTTGGATGGAAAAATGGGTTATTATAAAGCAGCTAAACAATTTGATGTGCCACAGACGACATTAGAGAGAAAAGTTAAGGCTGCTCGCCCAGTATTGAGCGAAATATCTGAGGTAAACTTACCCATACCAATTAAAGTACCATTGGGTCCTAGGCTGCCTGTTTTTTCTGTGTCTGAAGATAATGAGCTTTGTGCCTATTTATTAGAAATGGAAGAAAGGTTTTATGGACTTACGGTTAAAGATCTAAGGGCATTAGTATACCAGttagcaattaaaaataataagccTAATCCATTCAATGCTGAGAAAAAAGAAGCTGGTAGAGAGTGGACAAATGGCTTCCTAAAACGACACCCAGAGCTTTCAATTAGAAAGCCTGAAAATACTTCTGCTGCCAGAGCATCTGGTTTTAACAAAGTTGCAGTCGAAAAATTCTTCAATTTCCTCGGCAACGTGTACGACGAGCACCAACTAACTCCTGACCGTGTATACAACTGTGACGAAACGGGGGTTACTGTTGTGCCAAAGACAAATTCAAAGATAATCGCTAAAAGAGGACGGAAACAGGTTGGGGTCATAGTTTCAGCAGAACGAGGACAGACGGTAACGGTCGAGATATGCTTCAGTGCAGCTGGAAACTACATGCCACCTATGCTTATCTTTCCAAAAAAAGGATGA
- Protein Sequence
- MVRDYKRTTDRGSWSEESMREAIQAVLDGKMGYYKAAKQFDVPQTTLERKVKAARPVLSEISEVNLPIPIKVPLGPRLPVFSVSEDNELCAYLLEMEERFYGLTVKDLRALVYQLAIKNNKPNPFNAEKKEAGREWTNGFLKRHPELSIRKPENTSAARASGFNKVAVEKFFNFLGNVYDEHQLTPDRVYNCDETGVTVVPKTNSKIIAKRGRKQVGVIVSAERGQTVTVEICFSAAGNYMPPMLIFPKKG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01251688;
- 90% Identity
- iTF_01525860; iTF_01538670; iTF_00404629; iTF_00147225;
- 80% Identity
- -