Cmes005387.1
Basic Information
- Insect
- Cybosia mesomella
- Gene Symbol
- -
- Assembly
- GCA_946251875.1
- Location
- CAMIUH010000149.1:183640-184485[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-14 2.8e-11 44.9 0.0 1 42 15 57 15 60 0.93
Sequence Information
- Coding Sequence
- ATGGTTCGTGACTACAAACGCACGACTGACAGAGGGTCGTGGTCCGAAGAATCCATGCGGGAAGCAATTCAAGCGGTTTTGGATGGAAAAATGGGTTATTATAAAGCAGCTAAACAATTTGATGTGCCACAGACGACATTAGAGAGAAAAGTTAAGGCTGGTCGCCCAGTATTGAGCGAAATATCTGAGGTAAACTTACCCATACCAATTAAAGTACCATTGGGTCCTAGGCTGCCTGTTTTTTCTGTGTCTGAAGAAAATGAGCTTTGTGCCTATTTATTAGAAATGGTAGAAAGGTTTTATGGACTTACGGTTAAAGATCTAAGGGCATTAGTATACCAGTtagcaattaaaaataataagcctAATCCATTCAACGCTGAGAAAAAAGAAGCTGGTAGAGAGTGGACAAATGGCTTCCTAAAACGACACCCAGAGCTTTCAATTAGAAAGCCTGAAAATACTTCTGCTGCCAGAGCATCTGGTTTTAACAAAGTTGCAGTCGAAAAATTCTTCAATTTCCTCGGCAACGTGTACGACGAGCACCAACTAACTCCTGACCGTGTATACAACTGTGACGAAACGGGGGTTACTGTTGTGCCAAAGACAAATTCAAAGATAATCGCTAAAAGAGGACGGAAACAGGTTGGGGTCATAGTTTCAGCAGAACGAGGACAGACGGTAACGGTCGAGATATGCTTCAGTGCAGCTGGAAACTACATGCCACCTATGCTTATCTTTCCAAGAAAAAGGATGAATCCAGAGCTGATGGTGAATTCACAAGCTGGTGCTTGGGGCACATGTAGTGATTCGGGCTGGATTACTTCCGAGCTGTTCCTCCAATGA
- Protein Sequence
- MVRDYKRTTDRGSWSEESMREAIQAVLDGKMGYYKAAKQFDVPQTTLERKVKAGRPVLSEISEVNLPIPIKVPLGPRLPVFSVSEENELCAYLLEMVERFYGLTVKDLRALVYQLAIKNNKPNPFNAEKKEAGREWTNGFLKRHPELSIRKPENTSAARASGFNKVAVEKFFNFLGNVYDEHQLTPDRVYNCDETGVTVVPKTNSKIIAKRGRKQVGVIVSAERGQTVTVEICFSAAGNYMPPMLIFPRKRMNPELMVNSQAGAWGTCSDSGWITSELFLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01525860; iTF_00711757; iTF_00942735; iTF_00851694; iTF_00282197; iTF_00147225; iTF_01538670; iTF_01158624;
- 90% Identity
- iTF_01085065;
- 80% Identity
- -