Ople019482.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997733.1:4236897-4246925[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-10 2.7e-07 31.4 0.1 1 40 12 51 12 56 0.93 2 2 2.1e-08 9e-06 26.6 0.0 1 39 72 110 72 113 0.91
Sequence Information
- Coding Sequence
- ATGGGTTTGAAACGTCGAAAACGAGCTCTGTGGACGGAAGAAAACTTGAGAGCTGCTATGGAAGCTATTAgaaatgaaaaaataacaaaagcagCAGCAGCCAATCGTTACGGAATTCCTTTTCAGACTATCAGCGATCATTTGAGAACGGGAAGCTTAGTGAAACGATTGGGACGACATTCGGATAACCTGCCTCCAAGAAGAGTGGCATGGACGGAAGAAGATATGCACGGGGCAATGGCGGCAGTAATTCAGCATAACATGACTCAGAGCGCTGCAGCAGAACTATTCGGCATTCCCAGGCCAACATTAGCTGATCACTTGTCCAAAAGAAACATCGGGAATCGAGTGGGGCGCCATTCTATAATGAATGAAGCTCATGAAAAGTTCCTTGTCAGCAGACTAATAGAACTAGCTAACAATGAGCAGAGTGAGCAGCTACCAGAATGGGCATCAATATATTTCCTTAAAATTACAGACAATGAGCTAAAATGCAATCTTTGTGATGTAACCTTAAAAGCAGAAGAAAAATCTCTTGACCTTCTAGATCATTTAAAAGTTGACCATAAAGATATTTATGACCTACACAAAGACAACCCGGAGGCTACGGTTGGGTTCCGGATTGAGTTTCTGCATTTAAATGTGTTGAAAGACGATGGAGACCCAAAGACTCAGCCCGTTATACTTGGTGAGGTTTGTGAAGCTACAACAGAAACTATGGTGGAGAAAGGTGAAGAAATCACCTCCAAATCTGATGAATCCAACTTGCATTTTGTGCTCCTGGATGGAAAGACAACAAAGAAATCTAGGCGGGAGAGTGCAGGGCCACGTAAACGCAGCTGGGTGTGGAAGTACTTTGATAAGCTCAGCAACATCATCTACCGCTGTAAGCTTTGCAATGTGGTGCTGTCAATCAAGGGTTGCAATTCAAACAACATGAACCGTCATGTCCGGTCTAGACATCCAACTGTTTTCAAAAGTGAGGTGAATAAGAGAGACAAGGTGGAGAATGTCCATTTGTTGACTAGTGAGATGGACACCCCATACGCTATTAAAACAGAGGAGATTTATGCTAGTGATCGGGATTATGAGGAAATAACTACAGATAGCCCAACCCAGAAGCTCCGTCGGTCCTGGATCTGGTCATACTTCGACCGAGTGTCCACCACGCAGGCGCGCTGCAAGCTGTGCGAGCGCCACATCTGTCACGGCGGCAACGCCACCGGCAACATGAACCGACACCTCAAGATGATACACCATAAGACTGCTGTCAATATGCCTAGTGACATGAGCTGGGTGTGGAAAGTCTTCGAAACGGTGGACAACGACTTCTACAGCTGCAAGATTTGCCAGTACAAGTGTCTAAAGTGCAGTGACGTAGACAAGGACATGAACGGTATTCTGAGCCACCTCAAGTTGGAACATGGGGTGATATCCGGTGATCAGATAATTACGGGGGCAGATGTTGAGGGTGAAGAGACCTGTTAG
- Protein Sequence
- MGLKRRKRALWTEENLRAAMEAIRNEKITKAAAANRYGIPFQTISDHLRTGSLVKRLGRHSDNLPPRRVAWTEEDMHGAMAAVIQHNMTQSAAAELFGIPRPTLADHLSKRNIGNRVGRHSIMNEAHEKFLVSRLIELANNEQSEQLPEWASIYFLKITDNELKCNLCDVTLKAEEKSLDLLDHLKVDHKDIYDLHKDNPEATVGFRIEFLHLNVLKDDGDPKTQPVILGEVCEATTETMVEKGEEITSKSDESNLHFVLLDGKTTKKSRRESAGPRKRSWVWKYFDKLSNIIYRCKLCNVVLSIKGCNSNNMNRHVRSRHPTVFKSEVNKRDKVENVHLLTSEMDTPYAIKTEEIYASDRDYEEITTDSPTQKLRRSWIWSYFDRVSTTQARCKLCERHICHGGNATGNMNRHLKMIHHKTAVNMPSDMSWVWKVFETVDNDFYSCKICQYKCLKCSDVDKDMNGILSHLKLEHGVISGDQIITGADVEGEETC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01063687;
- 90% Identity
- iTF_01085578;
- 80% Identity
- iTF_01085578;