Basic Information

Insect: Ochropleura leucogaster
Gene Symbol: -
Assembly: GCA_958449745.1
Location: OY288227.1:2291078-2294391[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.52 41 5.6 0.6 6 21 220 235 220 236 0.94

2 13 0.00067 0.053 14.7 0.6 2 23 262 283 261 283 0.97

3 13 0.02 1.6 10.0 4.2 1 23 294 316 294 316 0.97

4 13 7.3e-05 0.0059 17.7 3.0 1 23 327 349 327 349 0.99

5 13 0.00015 0.012 16.7 1.9 1 23 357 380 357 380 0.96

6 13 0.0063 0.5 11.6 0.1 2 23 387 408 386 408 0.95

7 13 0.0085 0.68 11.2 5.1 1 23 414 436 414 436 0.98

8 13 3.5e-07 2.8e-05 25.0 1.2 1 23 442 464 442 464 0.96

9 13 5e-05 0.004 18.2 0.4 1 23 470 492 470 492 0.98

10 13 1.2e-06 9.2e-05 23.4 0.2 1 23 498 520 498 520 0.98

11 13 2.5e-05 0.002 19.2 0.4 1 23 526 548 526 548 0.99

12 13 4.6e-05 0.0037 18.4 2.2 1 21 554 574 554 576 0.96

13 13 2.3e-06 0.00019 22.4 0.6 1 23 582 604 582 604 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.52	41	5.6	0.6	6	21	220	235	220	236	0.94
2	13	0.00067	0.053	14.7	0.6	2	23	262	283	261	283	0.97
3	13	0.02	1.6	10.0	4.2	1	23	294	316	294	316	0.97
4	13	7.3e-05	0.0059	17.7	3.0	1	23	327	349	327	349	0.99
5	13	0.00015	0.012	16.7	1.9	1	23	357	380	357	380	0.96
6	13	0.0063	0.5	11.6	0.1	2	23	387	408	386	408	0.95
7	13	0.0085	0.68	11.2	5.1	1	23	414	436	414	436	0.98
8	13	3.5e-07	2.8e-05	25.0	1.2	1	23	442	464	442	464	0.96
9	13	5e-05	0.004	18.2	0.4	1	23	470	492	470	492	0.98
10	13	1.2e-06	9.2e-05	23.4	0.2	1	23	498	520	498	520	0.98
11	13	2.5e-05	0.002	19.2	0.4	1	23	526	548	526	548	0.99
12	13	4.6e-05	0.0037	18.4	2.2	1	21	554	574	554	576	0.96
13	13	2.3e-06	0.00019	22.4	0.6	1	23	582	604	582	604	0.98

Sequence Information

Coding Sequence: atggaaatAAGTGTTCAGACATTCGACAAAATATGCCGCGTCTGTTTAATAGAATGTGCCGACATGAAGTCTCTATTTACAAAGATGGATGGTGAAAAACGAAACTTGTTCGAAATCCTTGCATTTACTGCTGATGTTAATGTTAAATTCGAGGATAGTCTGCCAAAACAGGTTTGCGGTGAATGTGAGTCGGTCATGTGCAAGGCAGATGCATTTAAACGCCGCTGCCATAATTCCGAGGCGGTTCTAAACAACATCTACCAAAACTCTTTGAACCGTGGTGAATCATCTAATATTGACAAAAAATGCTCGATAAAAGATGAAAATGGGGATATAACTGAAAAATTAagcaattatattaattttgacaCTTCAAGTGCTACTAATTACAATTCCCATGACAGTTTTGATAAGAAAAATGTGTTAGTACAAGATACTTCAATATACCCAATCGCCGACGTAAGTTTTTGTAAGCTCACTGACTCCGCAGCACCTGAAAACCCCGAACAGCCTGTCAAAGAAGAGATAAACTTGAATTTTGATGATGACATAAGCTTTCCTGATCACTATGATGATGGAACAGCATGTGATGAGTTACCCATAGATCTTAAAGAGGAGAAACCTTTAAAATCTGAAGCCAAGAAATACACATGTTGCTGTAGACTATCATTTACTTCTAAAGACAAATACAAAAGCCATTTAAAGCAAGAAAACTGTAACAAGTTCaaaaagattttagaaaaagtgaataaaaacaaattagttaCTATTCAAAGTGAGATAGAGTGTGTTGAATGTAATCACAAATTTAAAACTCCTAATGCATGGAGAATACACCAAGAAACCCATTTTAATGAACATAATAGCAAATCATTATCTCATGTCTGCAAATTTTgtttatgtcagtttaaaacgGAAGCAGCATTAAGAACACACATTCTAAAACACGAGAAAACGATAAACAGCAAAACTGAATCGTACCAATGCTCGTTCTGTTTACGTAAATTCAAGAATAAAACTTCTCTAACAGCTCACGTACAACGCCATGAAGAAACGGACAACATAAAACATATTTGCAAAGTATGTAAAAGAGAATTCAAATACAAAGCTTATTTAGAAAATCATGTTTTAACAATGCATTCAAGAAAGAATGGTATTAGTTGCGAGATTTGTGCGCAAAGTTTTCCAAATGAAGAGAGTTTAGAATTGCATAAAGACAGCcataagaatgaaaaaaaacatcgcTGTACGGTATGCAATAAAGCTTTTCTAATGTTGTGTACTCTGAAAGAGCATATGCGGACGCATACTGGTGAGAAGCCGTTCTTATGCTCACAATGTGGACGAGGGTTCAGTCAGAAGACTAATTTGGCACAACATATGAGAAGACATCAGGGGTTGAAACCTTTTAAATGTGAGAATTGTGAAAAGGGATTCGTGTCAAAAGGGGAACTCGACGCGCACAACCGCAAACACAGCGGAGCGCATCCCTTCGTCTGTGACGATTGCGGAAACGGTTTTACCACCTCAAGCGCCTTAGTCAAACACCGCCGAATACATACCGGGGAAAAACCTTACCAATGTGACCTTTGCCCCATGAGATTTGCTGCATCCGGGACATTAAAGAACCATAGACGAACACACACTGGAGAACGGCCCTTCCAATGCTCTTACTGCGAAAAAGCCTTTGTCCAACGCAACGATTTAATCTCACACATACGTTGTCATACTGGTGAAAAGCCATATATTTGCACTCAGTGTGGACAGTCGTTCAGGAAAGCATCTGGGCTGAAGAGTCATGTCAAAATGCATGTTAAGGAGCCGGGGAATTTGTTGCAAGGTGTTAGTGTAATGTTGAATGGGATGCAGTGTGCAGAACAGTGA
Protein Sequence: MEISVQTFDKICRVCLIECADMKSLFTKMDGEKRNLFEILAFTADVNVKFEDSLPKQVCGECESVMCKADAFKRRCHNSEAVLNNIYQNSLNRGESSNIDKKCSIKDENGDITEKLSNYINFDTSSATNYNSHDSFDKKNVLVQDTSIYPIADVSFCKLTDSAAPENPEQPVKEEINLNFDDDISFPDHYDDGTACDELPIDLKEEKPLKSEAKKYTCCCRLSFTSKDKYKSHLKQENCNKFKKILEKVNKNKLVTIQSEIECVECNHKFKTPNAWRIHQETHFNEHNSKSLSHVCKFCLCQFKTEAALRTHILKHEKTINSKTESYQCSFCLRKFKNKTSLTAHVQRHEETDNIKHICKVCKREFKYKAYLENHVLTMHSRKNGISCEICAQSFPNEESLELHKDSHKNEKKHRCTVCNKAFLMLCTLKEHMRTHTGEKPFLCSQCGRGFSQKTNLAQHMRRHQGLKPFKCENCEKGFVSKGELDAHNRKHSGAHPFVCDDCGNGFTTSSALVKHRRIHTGEKPYQCDLCPMRFAASGTLKNHRRTHTGERPFQCSYCEKAFVQRNDLISHIRCHTGEKPYICTQCGQSFRKASGLKSHVKMHVKEPGNLLQGVSVMLNGMQCAEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00041986;
90% Identity: iTF_01085632;
80% Identity: -